RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 RAD21O60216 631 aa9.88□□□□□ -0.83
TMEM116-206ENST00000548283 PIAS4Q8N2W9 510 aaPredicted RBP9.88□□□□□ -0.83
TMEM116-206ENST00000548283 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
TMEM116-206ENST00000548283 PIK3C2AO00443 1686 aa9.87□□□□□ -0.83
TMEM116-206ENST00000548283 RGPD8O14715 1765 aaPredicted RBP9.87□□□□□ -0.83
TMEM116-206ENST00000548283 ATAD2Q6PL18 1390 aa9.87□□□□□ -0.83
TMEM116-206ENST00000548283 TBX22Q9Y458 520 aa9.87□□□□□ -0.83
TMEM116-206ENST00000548283 MYBBP1AQ9BQG0 1328 aaKnown RBP9.86□□□□□ -0.83
TMEM116-206ENST00000548283 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
TMEM116-206ENST00000548283 ALS2Q96Q42 1657 aa9.85□□□□□ -0.83
TMEM116-206ENST00000548283 POLR3AO14802 1390 aaPredicted RBP9.85□□□□□ -0.83
TMEM116-206ENST00000548283 PNPLA6Q8IY17 1366 aa9.85□□□□□ -0.83
TMEM116-206ENST00000548283 ANP32CO43423 234 aa9.84□□□□□ -0.83
TMEM116-206ENST00000548283 ABCC6O95255 1503 aa9.84□□□□□ -0.83
TMEM116-206ENST00000548283 ROBO2Q9HCK4 1378 aa9.84□□□□□ -0.83
TMEM116-206ENST00000548283 KCTD17Q8N5Z5 321 aa9.83□□□□□ -0.84
TMEM116-206ENST00000548283 HIRIP3Q9BW71 556 aaPredicted RBP9.83□□□□□ -0.84
TMEM116-206ENST00000548283 DCCP43146 1447 aa9.83□□□□□ -0.84
TMEM116-206ENST00000548283 LMO7Q8WWI1 1683 aa9.83□□□□□ -0.84
TMEM116-206ENST00000548283 LTKP29376 864 aa9.83□□□□□ -0.84
TMEM116-206ENST00000548283 MYT1LQ9UL68 1186 aa9.83□□□□□ -0.84
TMEM116-206ENST00000548283 NEUROD2Q15784 382 aa9.82□□□□□ -0.84
TMEM116-206ENST00000548283 AEBP1Q8IUX7 1158 aa9.82□□□□□ -0.84
TMEM116-206ENST00000548283 CARD14Q9BXL6 1004 aa9.82□□□□□ -0.84
TMEM116-206ENST00000548283 MED1Q15648 1581 aaPredicted RBP9.82□□□□□ -0.84
TMEM116-206ENST00000548283 PEAK1Q9H792 1746 aa9.82□□□□□ -0.84
TMEM116-206ENST00000548283 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
TMEM116-206ENST00000548283 EVC2Q86UK5 1308 aa9.82□□□□□ -0.84
TMEM116-206ENST00000548283 COL22A1Q8NFW1 1626 aaPredicted RBP9.81□□□□□ -0.84
TMEM116-206ENST00000548283 BRPF1P55201 1214 aaPredicted RBP9.81□□□□□ -0.84
TMEM116-206ENST00000548283 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.81□□□□□ -0.84
TMEM116-206ENST00000548283 PNISRQ8TF01 805 aaKnown RBP9.81□□□□□ -0.84
TMEM116-206ENST00000548283 PLEKHH1Q9ULM0 1364 aa9.81□□□□□ -0.84
TMEM116-206ENST00000548283 AATKQ6ZMQ8 1374 aa9.81□□□□□ -0.84
TMEM116-206ENST00000548283 SLIT3O75094 1523 aa9.8□□□□□ -0.84
TMEM116-206ENST00000548283 A0A1W2PP64 1363 aa9.8□□□□□ -0.84
TMEM116-206ENST00000548283 NPHP4O75161 1426 aaPredicted RBP9.8□□□□□ -0.84
TMEM116-206ENST00000548283 BRPF3Q9ULD4 1205 aa9.8□□□□□ -0.84
TMEM116-206ENST00000548283 OVOS2A0A0J9YW53 1432 aa9.79□□□□□ -0.84
TMEM116-206ENST00000548283 OVOS2Q6IE36 1432 aa9.79□□□□□ -0.84
TMEM116-206ENST00000548283 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-206ENST00000548283 USP31Q70CQ4 1352 aa9.79□□□□□ -0.84
TMEM116-206ENST00000548283 MAP2P11137 1827 aaKnown RBP9.79□□□□□ -0.84
TMEM116-206ENST00000548283 ZNF326Q5BKZ1 582 aaKnown RBP9.78□□□□□ -0.84
TMEM116-206ENST00000548283 PANK3Q9H999 370 aa9.78□□□□□ -0.84
TMEM116-206ENST00000548283 MTMR7Q9Y216 660 aa9.78□□□□□ -0.84
TMEM116-206ENST00000548283 CDK12Q9NYV4 1490 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-206ENST00000548283 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
TMEM116-206ENST00000548283 ADAMTS7Q9UKP4 1686 aa9.78□□□□□ -0.84
TMEM116-206ENST00000548283 ZBED9Q6R2W3 1325 aa9.78□□□□□ -0.84
TMEM116-206ENST00000548283 ADGRL3Q9HAR2 1447 aa9.78□□□□□ -0.84
TMEM116-206ENST00000548283 ABCA3Q99758 1704 aa9.77□□□□□ -0.84
TMEM116-206ENST00000548283 RNF123Q5XPI4 1314 aa9.77□□□□□ -0.84
TMEM116-206ENST00000548283 NSD3Q9BZ95 1437 aa9.77□□□□□ -0.85
TMEM116-206ENST00000548283 NLRP13Q86W25 1043 aa9.77□□□□□ -0.85
TMEM116-206ENST00000548283 NHSL1Q5SYE7 1610 aa9.77□□□□□ -0.85
TMEM116-206ENST00000548283 PLEKHG3A1L390 1219 aa9.77□□□□□ -0.85
TMEM116-206ENST00000548283 NFAT5O94916 1531 aa9.76□□□□□ -0.85
TMEM116-206ENST00000548283 NCAPD2Q15021 1401 aa9.76□□□□□ -0.85
TMEM116-206ENST00000548283 ZNF521Q96K83 1311 aa9.76□□□□□ -0.85
TMEM116-206ENST00000548283 CCDC184Q52MB2 194 aa9.76□□□□□ -0.85
TMEM116-206ENST00000548283 WNK3Q9BYP7 1800 aa9.76□□□□□ -0.85
TMEM116-206ENST00000548283 FAM208AQ9UK61 1670 aaKnown RBP9.76□□□□□ -0.85
TMEM116-206ENST00000548283 APBB1O00213 710 aa9.76□□□□□ -0.85
TMEM116-206ENST00000548283 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
TMEM116-206ENST00000548283 FANCIQ9NVI1 1328 aa9.75□□□□□ -0.85
TMEM116-206ENST00000548283 TMEM132EQ6IEE7 984 aa9.75□□□□□ -0.85
TMEM116-206ENST00000548283 CWC22Q9HCG8 908 aaKnown RBP9.75□□□□□ -0.85
TMEM116-206ENST00000548283 COL18A1P39060 1754 aa9.74□□□□□ -0.85
TMEM116-206ENST00000548283 USP6P35125 1406 aa9.74□□□□□ -0.85
TMEM116-206ENST00000548283 PLEKHG2Q9H7P9 1386 aa9.74□□□□□ -0.85
TMEM116-206ENST00000548283 PPIP5K1Q6PFW1 1433 aa9.74□□□□□ -0.85
TMEM116-206ENST00000548283 WASLO00401 505 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-206ENST00000548283 CGNL1Q0VF96 1302 aa9.74□□□□□ -0.85
TMEM116-206ENST00000548283 LTN1O94822 1766 aa9.74□□□□□ -0.85
TMEM116-206ENST00000548283 CICQ96RK0 1608 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-206ENST00000548283 KIF24Q5T7B8 1368 aa9.74□□□□□ -0.85
TMEM116-206ENST00000548283 PPM1GO15355 546 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-206ENST00000548283 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-206ENST00000548283 PRAM1Q96QH2 718 aa9.73□□□□□ -0.85
TMEM116-206ENST00000548283 PPP2R1AP30153 589 aa9.73□□□□□ -0.85
TMEM116-206ENST00000548283 NGEFQ8N5V2 710 aa9.72□□□□□ -0.85
TMEM116-206ENST00000548283 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
TMEM116-206ENST00000548283 PRR36Q9H6K5 1346 aa9.72□□□□□ -0.85
TMEM116-206ENST00000548283 ZNF592Q92610 1267 aa9.71□□□□□ -0.85
TMEM116-206ENST00000548283 N4BP2Q86UW6 1770 aaPredicted RBP9.71□□□□□ -0.85
TMEM116-206ENST00000548283 ESF1Q9H501 851 aaKnown RBP9.71□□□□□ -0.85
TMEM116-206ENST00000548283 CEBPAP49715 358 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-206ENST00000548283 DLG5Q8TDM6 1919 aa9.71□□□□□ -0.86
TMEM116-206ENST00000548283 HMGB1P09429 215 aaKnown RBP9.7□□□□□ -0.86
TMEM116-206ENST00000548283 TRMT2AQ8IZ69 625 aaKnown RBP9.7□□□□□ -0.86
TMEM116-206ENST00000548283 LTBP4Q8N2S1 1624 aa9.7□□□□□ -0.86
TMEM116-206ENST00000548283 PLCH1Q4KWH8 1693 aa9.7□□□□□ -0.86
TMEM116-206ENST00000548283 CDK19Q9BWU1 502 aa9.7□□□□□ -0.86
TMEM116-206ENST00000548283 EID1Q9Y6B2 187 aa9.69□□□□□ -0.86
TMEM116-206ENST00000548283 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.69□□□□□ -0.86
TMEM116-206ENST00000548283 TXNDC2Q86VQ3 553 aa9.69□□□□□ -0.86
TMEM116-206ENST00000548283 SIPA1L3O60292 1781 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-206ENST00000548283 MLECQ14165 292 aa9.68□□□□□ -0.86
TMEM116-206ENST00000548283 IFNLR1Q8IU57 520 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms