RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 TOPAZ1Q8N9V7 1692 aa27.54■■■□□ 2
RITA1-201ENST00000548278 PNPLA6Q8IY17 1366 aa27.54■■■□□ 2
RITA1-201ENST00000548278 XRN1Q8IZH2 1706 aaKnown RBP27.54■■■□□ 2
RITA1-201ENST00000548278 SPINK5Q9NQ38 1064 aaPredicted RBP27.53■■■□□ 2
RITA1-201ENST00000548278 U2AF1L5P0DN76 240 aaPredicted RBP27.53■■■□□ 2
RITA1-201ENST00000548278 U2AF1Q01081 240 aaKnown RBP eCLIP27.53■■■□□ 2
RITA1-201ENST00000548278 TSHZ2Q9NRE2 1034 aa27.53■■■□□ 2
RITA1-201ENST00000548278 TCP11L2Q8N4U5 519 aa27.52■■■□□ 2
RITA1-201ENST00000548278 WWC1Q8IX03 1113 aa27.52■■■□□ 2
RITA1-201ENST00000548278 ZNF692Q9BU19 519 aaPredicted RBP27.52■■■□□ 2
RITA1-201ENST00000548278 E9PSI1 815 aa27.5■■□□□ 1.99
RITA1-201ENST00000548278 NME9Q86XW9 330 aa27.5■■□□□ 1.99
RITA1-201ENST00000548278 DMRT2Q9Y5R5 561 aa27.5■■□□□ 1.99
RITA1-201ENST00000548278 SETD1BQ9UPS6 1966 aaKnown RBP27.5■■□□□ 1.99
RITA1-201ENST00000548278 PHF23Q9BUL5 403 aaPredicted RBP27.5■■□□□ 1.99
RITA1-201ENST00000548278 PIK3R4Q99570 1358 aa27.49■■□□□ 1.99
RITA1-201ENST00000548278 PLEKHG3A1L390 1219 aa27.48■■□□□ 1.99
RITA1-201ENST00000548278 POLKQ9UBT6 870 aa27.48■■□□□ 1.99
RITA1-201ENST00000548278 MAP2P11137 1827 aaKnown RBP27.47■■□□□ 1.99
RITA1-201ENST00000548278 NCBP3Q53F19 620 aaKnown RBP27.47■■□□□ 1.99
RITA1-201ENST00000548278 MYT1Q01538 1121 aa27.46■■□□□ 1.99
RITA1-201ENST00000548278 RRP7AQ9Y3A4 280 aaKnown RBP27.46■■□□□ 1.99
RITA1-201ENST00000548278 NKTRP30414 1462 aaKnown RBP27.45■■□□□ 1.99
RITA1-201ENST00000548278 U2SURPO15042 1029 aaKnown RBP27.45■■□□□ 1.98
RITA1-201ENST00000548278 DIAPH1O60610 1272 aaKnown RBP27.45■■□□□ 1.98
RITA1-201ENST00000548278 FBLN1P23142 703 aa27.45■■□□□ 1.98
RITA1-201ENST00000548278 CCDC27Q2M243 656 aa27.45■■□□□ 1.98
RITA1-201ENST00000548278 ZRANB1Q9UGI0 708 aa27.45■■□□□ 1.98
RITA1-201ENST00000548278 NRKQ7Z2Y5 1582 aa27.44■■□□□ 1.98
RITA1-201ENST00000548278 ANKLE2Q86XL3 938 aa27.44■■□□□ 1.98
RITA1-201ENST00000548278 NEUROD2Q15784 382 aa27.44■■□□□ 1.98
RITA1-201ENST00000548278 PLEKHF1Q96S99 279 aa27.44■■□□□ 1.98
RITA1-201ENST00000548278 ACEP12821 1306 aa27.44■■□□□ 1.98
RITA1-201ENST00000548278 AATKQ6ZMQ8 1374 aa27.43■■□□□ 1.98
RITA1-201ENST00000548278 NUTM2FA1L443 756 aa27.43■■□□□ 1.98
RITA1-201ENST00000548278 PLIN1O60240 522 aa27.42■■□□□ 1.98
RITA1-201ENST00000548278 KCNA6P17658 529 aa27.42■■□□□ 1.98
RITA1-201ENST00000548278 EXOC6Q8TAG9 804 aa27.42■■□□□ 1.98
RITA1-201ENST00000548278 COG3Q96JB2 828 aa27.42■■□□□ 1.98
RITA1-201ENST00000548278 WDR63Q8IWG1 891 aa27.4■■□□□ 1.98
RITA1-201ENST00000548278 TTC21BQ7Z4L5 1316 aa27.39■■□□□ 1.98
RITA1-201ENST00000548278 CCDC136Q96JN2 1154 aa27.39■■□□□ 1.98
RITA1-201ENST00000548278 USP6P35125 1406 aa27.39■■□□□ 1.98
RITA1-201ENST00000548278 CHD2O14647 1828 aaKnown RBP27.38■■□□□ 1.97
RITA1-201ENST00000548278 EMILIN1Q9Y6C2 1016 aa27.37■■□□□ 1.97
RITA1-201ENST00000548278 CDK12Q9NYV4 1490 aaPredicted RBP27.37■■□□□ 1.97
RITA1-201ENST00000548278 PPM1GO15355 546 aaPredicted RBP27.37■■□□□ 1.97
RITA1-201ENST00000548278 RGPD8O14715 1765 aaPredicted RBP27.36■■□□□ 1.97
RITA1-201ENST00000548278 SSH2Q76I76 1423 aa27.36■■□□□ 1.97
RITA1-201ENST00000548278 OVOS2A0A0J9YW53 1432 aa27.33■■□□□ 1.97
RITA1-201ENST00000548278 OVOS2Q6IE36 1432 aa27.33■■□□□ 1.97
RITA1-201ENST00000548278 TMPOP42166 694 aaKnown RBP27.32■■□□□ 1.96
RITA1-201ENST00000548278 PNNQ9H307 717 aaKnown RBP27.32■■□□□ 1.96
RITA1-201ENST00000548278 ANKARQ7Z5J8 1434 aa27.32■■□□□ 1.96
RITA1-201ENST00000548278 FCHSD2O94868 740 aa27.32■■□□□ 1.96
RITA1-201ENST00000548278 MAPK8IP3Q9UPT6 1336 aa27.32■■□□□ 1.96
RITA1-201ENST00000548278 C20orf194Q5TEA3 1177 aa27.31■■□□□ 1.96
RITA1-201ENST00000548278 LRRC7Q96NW7 1537 aa27.3■■□□□ 1.96
RITA1-201ENST00000548278 FMN2Q9NZ56 1722 aa27.3■■□□□ 1.96
RITA1-201ENST00000548278 IL13P35225 146 aa27.3■■□□□ 1.96
RITA1-201ENST00000548278 RRS1Q15050 365 aaKnown RBP27.3■■□□□ 1.96
RITA1-201ENST00000548278 PMFBP1Q8TBY8 1022 aa27.3■■□□□ 1.96
RITA1-201ENST00000548278 CRBNQ96SW2 442 aa27.3■■□□□ 1.96
RITA1-201ENST00000548278 NALCNQ8IZF0 1738 aa27.29■■□□□ 1.96
RITA1-201ENST00000548278 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.29■■□□□ 1.96
RITA1-201ENST00000548278 RSPH6AQ9H0K4 717 aa27.29■■□□□ 1.96
RITA1-201ENST00000548278 TRIM35Q9UPQ4 493 aa27.28■■□□□ 1.96
RITA1-201ENST00000548278 TTC21AQ8NDW8 1320 aa27.27■■□□□ 1.96
RITA1-201ENST00000548278 NPHP4O75161 1426 aaPredicted RBP27.26■■□□□ 1.95
RITA1-201ENST00000548278 USP31Q70CQ4 1352 aa27.26■■□□□ 1.95
RITA1-201ENST00000548278 BCAR3O75815 825 aa27.25■■□□□ 1.95
RITA1-201ENST00000548278 NGDNQ8NEJ9 315 aaKnown RBP27.25■■□□□ 1.95
RITA1-201ENST00000548278 MYH16Q9H6N6 1097 aa27.25■■□□□ 1.95
RITA1-201ENST00000548278 PRKAR2BP31323 418 aa27.24■■□□□ 1.95
RITA1-201ENST00000548278 RIPK4P57078 832 aa27.22■■□□□ 1.95
RITA1-201ENST00000548278 HMOX1P09601 288 aa27.2■■□□□ 1.95
RITA1-201ENST00000548278 IL16Q14005 1332 aa27.19■■□□□ 1.94
RITA1-201ENST00000548278 PEAK1Q9H792 1746 aa27.18■■□□□ 1.94
RITA1-201ENST00000548278 PIK3C2AO00443 1686 aa27.17■■□□□ 1.94
RITA1-201ENST00000548278 RARSP54136 660 aaKnown RBP27.17■■□□□ 1.94
RITA1-201ENST00000548278 PHACTR3Q96KR7 559 aa27.17■■□□□ 1.94
RITA1-201ENST00000548278 NEFMP07197 916 aa27.17■■□□□ 1.94
RITA1-201ENST00000548278 ADGRL3Q9HAR2 1447 aa27.16■■□□□ 1.94
RITA1-201ENST00000548278 FANCIQ9NVI1 1328 aa27.16■■□□□ 1.94
RITA1-201ENST00000548278 RBM19Q9Y4C8 960 aaKnown RBP27.15■■□□□ 1.94
RITA1-201ENST00000548278 NFE2L2Q16236 605 aa27.15■■□□□ 1.94
RITA1-201ENST00000548278 RBM33Q96EV2 1170 aaKnown RBP27.15■■□□□ 1.94
RITA1-201ENST00000548278 EIF4A2Q14240 407 aaKnown RBP27.13■■□□□ 1.93
RITA1-201ENST00000548278 TSR2Q969E8 191 aaKnown RBP27.13■■□□□ 1.93
RITA1-201ENST00000548278 NWD1Q149M9 1564 aa27.12■■□□□ 1.93
RITA1-201ENST00000548278 CT47B1P0C2W7 299 aaPredicted RBP27.11■■□□□ 1.93
RITA1-201ENST00000548278 PDE3AQ14432 1141 aa27.11■■□□□ 1.93
RITA1-201ENST00000548278 USP54Q70EL1 1684 aa27.1■■□□□ 1.93
RITA1-201ENST00000548278 MAP3K19Q56UN5 1328 aa27.1■■□□□ 1.93
RITA1-201ENST00000548278 PHF8Q9UPP1 1060 aa27.1■■□□□ 1.93
RITA1-201ENST00000548278 MARF1Q9Y4F3 1742 aaKnown RBP27.1■■□□□ 1.93
RITA1-201ENST00000548278 HSP90AB2PQ58FF8 381 aa27.09■■□□□ 1.93
RITA1-201ENST00000548278 SOX12O15370 315 aa27.09■■□□□ 1.93
RITA1-201ENST00000548278 RGPD1P0DJD0 1748 aa27.08■■□□□ 1.93
RITA1-201ENST00000548278 EXOSC9Q06265 439 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms