RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
PRIM1-203ENST00000548173 USP21Q9UK80 565 aa11.29□□□□□ -0.6
PRIM1-203ENST00000548173 TOPAZ1Q8N9V7 1692 aa11.29□□□□□ -0.6
PRIM1-203ENST00000548173 ACEP12821 1306 aa11.29□□□□□ -0.6
PRIM1-203ENST00000548173 MARF1Q9Y4F3 1742 aaKnown RBP11.29□□□□□ -0.6
PRIM1-203ENST00000548173 ALS2Q96Q42 1657 aa11.28□□□□□ -0.6
PRIM1-203ENST00000548173 RALGAPBQ86X10 1494 aa11.28□□□□□ -0.6
PRIM1-203ENST00000548173 RBM6P78332 1123 aaKnown RBP11.28□□□□□ -0.6
PRIM1-203ENST00000548173 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
PRIM1-203ENST00000548173 BCL9LQ86UU0 1499 aa11.27□□□□□ -0.6
PRIM1-203ENST00000548173 CDK12Q9NYV4 1490 aaPredicted RBP11.27□□□□□ -0.6
PRIM1-203ENST00000548173 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
PRIM1-203ENST00000548173 TRPC5Q9UL62 973 aaPredicted RBP11.27□□□□□ -0.61
PRIM1-203ENST00000548173 EVC2Q86UK5 1308 aa11.27□□□□□ -0.61
PRIM1-203ENST00000548173 SLIT2O94813 1529 aa11.26□□□□□ -0.61
PRIM1-203ENST00000548173 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
PRIM1-203ENST00000548173 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
PRIM1-203ENST00000548173 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
PRIM1-203ENST00000548173 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
PRIM1-203ENST00000548173 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
PRIM1-203ENST00000548173 ATRNO75882 1429 aa11.26□□□□□ -0.61
PRIM1-203ENST00000548173 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
PRIM1-203ENST00000548173 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
PRIM1-203ENST00000548173 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
PRIM1-203ENST00000548173 FAM83GA6ND36 823 aa11.23□□□□□ -0.61
PRIM1-203ENST00000548173 RGS12O14924 1447 aa11.23□□□□□ -0.61
PRIM1-203ENST00000548173 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
PRIM1-203ENST00000548173 BRD4O60885 1362 aaPredicted RBP11.22□□□□□ -0.61
PRIM1-203ENST00000548173 GJD4Q96KN9 370 aaPredicted RBP11.22□□□□□ -0.61
PRIM1-203ENST00000548173 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.22□□□□□ -0.61
PRIM1-203ENST00000548173 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
PRIM1-203ENST00000548173 USP6P35125 1406 aa11.21□□□□□ -0.61
PRIM1-203ENST00000548173 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
PRIM1-203ENST00000548173 NUTM2GQ5VZR2 741 aa11.21□□□□□ -0.61
PRIM1-203ENST00000548173 ABTB2Q8N961 1025 aa11.21□□□□□ -0.61
PRIM1-203ENST00000548173 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.62
PRIM1-203ENST00000548173 SSH2Q76I76 1423 aa11.2□□□□□ -0.62
PRIM1-203ENST00000548173 VPS72Q15906 364 aa11.2□□□□□ -0.62
PRIM1-203ENST00000548173 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
PRIM1-203ENST00000548173 USP19O94966 1318 aa11.19□□□□□ -0.62
PRIM1-203ENST00000548173 ST20-MTHFSA0A0A6YYL1 179 aa11.19□□□□□ -0.62
PRIM1-203ENST00000548173 NLRP13Q86W25 1043 aa11.19□□□□□ -0.62
PRIM1-203ENST00000548173 TESK2Q96S53 571 aa11.19□□□□□ -0.62
PRIM1-203ENST00000548173 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
PRIM1-203ENST00000548173 PRDM11Q9NQV5 511 aa11.19□□□□□ -0.62
PRIM1-203ENST00000548173 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
PRIM1-203ENST00000548173 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
PRIM1-203ENST00000548173 KIAA0232Q92628 1395 aa11.18□□□□□ -0.62
PRIM1-203ENST00000548173 PHRF1Q9P1Y6 1649 aaKnown RBP11.18□□□□□ -0.62
PRIM1-203ENST00000548173 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
PRIM1-203ENST00000548173 PUS7Q96PZ0 661 aaKnown RBP11.18□□□□□ -0.62
PRIM1-203ENST00000548173 BTG4Q9NY30 223 aa11.18□□□□□ -0.62
PRIM1-203ENST00000548173 GLI3P10071 1580 aa11.18□□□□□ -0.62
PRIM1-203ENST00000548173 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
PRIM1-203ENST00000548173 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
PRIM1-203ENST00000548173 TTC21BQ7Z4L5 1316 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 NRAPQ86VF7 1730 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 ONECUT3O60422 494 aaPredicted RBP11.16□□□□□ -0.62
PRIM1-203ENST00000548173 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 GCP02774 474 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 NLRP6P59044 892 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 AKAP12Q02952 1782 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 CPDO75976 1380 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 USP47Q96K76 1375 aa11.16□□□□□ -0.62
PRIM1-203ENST00000548173 CD163L1Q9NR16 1453 aa11.15□□□□□ -0.62
PRIM1-203ENST00000548173 CCDC9Q9Y3X0 531 aaKnown RBP11.15□□□□□ -0.62
PRIM1-203ENST00000548173 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.63
PRIM1-203ENST00000548173 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
PRIM1-203ENST00000548173 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
PRIM1-203ENST00000548173 TMC1Q8TDI8 760 aa11.14□□□□□ -0.63
PRIM1-203ENST00000548173 SPATA31A5Q5VU36 1347 aa11.13□□□□□ -0.63
PRIM1-203ENST00000548173 SPATA31A7Q8IWB4 1347 aa11.13□□□□□ -0.63
PRIM1-203ENST00000548173 MON2Q7Z3U7 1717 aa11.13□□□□□ -0.63
PRIM1-203ENST00000548173 SEPT12Q8IYM1 358 aa11.13□□□□□ -0.63
PRIM1-203ENST00000548173 SLIT3O75094 1523 aa11.13□□□□□ -0.63
PRIM1-203ENST00000548173 CAMTA1Q9Y6Y1 1673 aa11.12□□□□□ -0.63
PRIM1-203ENST00000548173 HDGFL2Q7Z4V5 671 aaPredicted RBP11.12□□□□□ -0.63
PRIM1-203ENST00000548173 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
PRIM1-203ENST00000548173 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
PRIM1-203ENST00000548173 TMF1P82094 1093 aa11.11□□□□□ -0.63
PRIM1-203ENST00000548173 FAM98CQ17RN3 349 aaKnown RBP11.11□□□□□ -0.63
PRIM1-203ENST00000548173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.11□□□□□ -0.63
PRIM1-203ENST00000548173 STRN4Q9NRL3 753 aa11.11□□□□□ -0.63
PRIM1-203ENST00000548173 A0A1W2PP64 1363 aa11.11□□□□□ -0.63
PRIM1-203ENST00000548173 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
PRIM1-203ENST00000548173 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
PRIM1-203ENST00000548173 SPATA31A1Q5TZJ5 1347 aa11.1□□□□□ -0.63
PRIM1-203ENST00000548173 EDC4Q6P2E9 1401 aaKnown RBP11.1□□□□□ -0.63
PRIM1-203ENST00000548173 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
PRIM1-203ENST00000548173 EVA1CP58658 441 aa11.1□□□□□ -0.63
PRIM1-203ENST00000548173 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
PRIM1-203ENST00000548173 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
PRIM1-203ENST00000548173 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
PRIM1-203ENST00000548173 ARHGEF25Q86VW2 580 aa11.09□□□□□ -0.63
PRIM1-203ENST00000548173 NME9Q86XW9 330 aa11.09□□□□□ -0.63
PRIM1-203ENST00000548173 A0A0G2JS52 829 aa11.08□□□□□ -0.64
PRIM1-203ENST00000548173 MYT1Q01538 1121 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms