RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 TOPAZ1Q8N9V7 1692 aa20.58■□□□□ 0.89
SEC23A-204ENST00000548032 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
SEC23A-204ENST00000548032 NUTM2GQ5VZR2 741 aa20.55■□□□□ 0.88
SEC23A-204ENST00000548032 MARF1Q9Y4F3 1742 aaKnown RBP20.55■□□□□ 0.88
SEC23A-204ENST00000548032 BCL9LQ86UU0 1499 aa20.55■□□□□ 0.88
SEC23A-204ENST00000548032 ALS2Q96Q42 1657 aa20.54■□□□□ 0.88
SEC23A-204ENST00000548032 ATRNO75882 1429 aa20.54■□□□□ 0.88
SEC23A-204ENST00000548032 UNC5CLQ8IV45 518 aa20.53■□□□□ 0.88
SEC23A-204ENST00000548032 FAM83GA6ND36 823 aa20.52■□□□□ 0.88
SEC23A-204ENST00000548032 ABCA3Q99758 1704 aa20.52■□□□□ 0.88
SEC23A-204ENST00000548032 SLIT2O94813 1529 aa20.52■□□□□ 0.87
SEC23A-204ENST00000548032 ATAD2Q6PL18 1390 aa20.51■□□□□ 0.87
SEC23A-204ENST00000548032 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
SEC23A-204ENST00000548032 CCER1Q8TC90 406 aaPredicted RBP20.5■□□□□ 0.87
SEC23A-204ENST00000548032 CLSPNQ9HAW4 1339 aa20.5■□□□□ 0.87
SEC23A-204ENST00000548032 GJD4Q96KN9 370 aaPredicted RBP20.49■□□□□ 0.87
SEC23A-204ENST00000548032 CCDC9Q9Y3X0 531 aaKnown RBP20.49■□□□□ 0.87
SEC23A-204ENST00000548032 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
SEC23A-204ENST00000548032 PRDM11Q9NQV5 511 aa20.47■□□□□ 0.87
SEC23A-204ENST00000548032 USP6P35125 1406 aa20.46■□□□□ 0.87
SEC23A-204ENST00000548032 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
SEC23A-204ENST00000548032 BTG4Q9NY30 223 aa20.46■□□□□ 0.87
SEC23A-204ENST00000548032 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SEC23A-204ENST00000548032 KIAA0232Q92628 1395 aa20.45■□□□□ 0.86
SEC23A-204ENST00000548032 CHRNA2Q15822 529 aa20.44■□□□□ 0.86
SEC23A-204ENST00000548032 VPS72Q15906 364 aa20.44■□□□□ 0.86
SEC23A-204ENST00000548032 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
SEC23A-204ENST00000548032 TMC1Q8TDI8 760 aa20.44■□□□□ 0.86
SEC23A-204ENST00000548032 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
SEC23A-204ENST00000548032 PLCH1Q4KWH8 1693 aa20.44■□□□□ 0.86
SEC23A-204ENST00000548032 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
SEC23A-204ENST00000548032 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.43■□□□□ 0.86
SEC23A-204ENST00000548032 CRYBG1Q9Y4K1 1723 aa20.42■□□□□ 0.86
SEC23A-204ENST00000548032 NLRP6P59044 892 aa20.42■□□□□ 0.86
SEC23A-204ENST00000548032 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
SEC23A-204ENST00000548032 USP19O94966 1318 aa20.41■□□□□ 0.86
SEC23A-204ENST00000548032 PHRF1Q9P1Y6 1649 aaKnown RBP20.41■□□□□ 0.86
SEC23A-204ENST00000548032 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
SEC23A-204ENST00000548032 COL14A1Q05707 1796 aaKnown RBP20.41■□□□□ 0.86
SEC23A-204ENST00000548032 GLI3P10071 1580 aa20.4■□□□□ 0.86
SEC23A-204ENST00000548032 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
SEC23A-204ENST00000548032 USP47Q96K76 1375 aa20.4■□□□□ 0.86
SEC23A-204ENST00000548032 TESK2Q96S53 571 aa20.4■□□□□ 0.86
SEC23A-204ENST00000548032 SSH2Q76I76 1423 aa20.39■□□□□ 0.85
SEC23A-204ENST00000548032 TTC21BQ7Z4L5 1316 aa20.39■□□□□ 0.85
SEC23A-204ENST00000548032 ZBTB7CA1YPR0 619 aa20.39■□□□□ 0.85
SEC23A-204ENST00000548032 GCP02774 474 aa20.39■□□□□ 0.85
SEC23A-204ENST00000548032 CCDC125Q86Z20 511 aa20.39■□□□□ 0.85
SEC23A-204ENST00000548032 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
SEC23A-204ENST00000548032 NRKQ7Z2Y5 1582 aa20.38■□□□□ 0.85
SEC23A-204ENST00000548032 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
SEC23A-204ENST00000548032 A0A0G2JS52 829 aa20.37■□□□□ 0.85
SEC23A-204ENST00000548032 MYT1Q01538 1121 aa20.37■□□□□ 0.85
SEC23A-204ENST00000548032 SLC12A5Q9H2X9 1139 aa20.37■□□□□ 0.85
SEC23A-204ENST00000548032 HDGFL2Q7Z4V5 671 aaPredicted RBP20.36■□□□□ 0.85
SEC23A-204ENST00000548032 SEPT12Q8IYM1 358 aa20.36■□□□□ 0.85
SEC23A-204ENST00000548032 SRCAPQ6ZRS2 3230 aa20.35■□□□□ 0.85
SEC23A-204ENST00000548032 SLC24A1O60721 1099 aa20.35■□□□□ 0.85
SEC23A-204ENST00000548032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.35■□□□□ 0.85
SEC23A-204ENST00000548032 NRAPQ86VF7 1730 aa20.35■□□□□ 0.85
SEC23A-204ENST00000548032 EP400Q96L91 3159 aa20.34■□□□□ 0.85
SEC23A-204ENST00000548032 TTC21AQ8NDW8 1320 aa20.34■□□□□ 0.85
SEC23A-204ENST00000548032 SOX12O15370 315 aa20.34■□□□□ 0.85
SEC23A-204ENST00000548032 EVA1CP58658 441 aa20.34■□□□□ 0.85
SEC23A-204ENST00000548032 FAM98CQ17RN3 349 aaKnown RBP20.34■□□□□ 0.85
SEC23A-204ENST00000548032 PUS7Q96PZ0 661 aaKnown RBP20.34■□□□□ 0.85
SEC23A-204ENST00000548032 ZRANB1Q9UGI0 708 aa20.34■□□□□ 0.85
SEC23A-204ENST00000548032 CPDO75976 1380 aa20.34■□□□□ 0.85
SEC23A-204ENST00000548032 PIK3C2AO00443 1686 aa20.33■□□□□ 0.85
SEC23A-204ENST00000548032 TMF1P82094 1093 aa20.33■□□□□ 0.85
SEC23A-204ENST00000548032 TERF2IPQ9NYB0 399 aa20.33■□□□□ 0.85
SEC23A-204ENST00000548032 AKAP12Q02952 1782 aa20.33■□□□□ 0.84
SEC23A-204ENST00000548032 SPATA31A5Q5VU36 1347 aa20.32■□□□□ 0.84
SEC23A-204ENST00000548032 SPATA31A7Q8IWB4 1347 aa20.32■□□□□ 0.84
SEC23A-204ENST00000548032 CD163L1Q9NR16 1453 aa20.32■□□□□ 0.84
SEC23A-204ENST00000548032 ONECUT3O60422 494 aaPredicted RBP20.3■□□□□ 0.84
SEC23A-204ENST00000548032 NME9Q86XW9 330 aa20.3■□□□□ 0.84
SEC23A-204ENST00000548032 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
SEC23A-204ENST00000548032 SLIT3O75094 1523 aa20.3■□□□□ 0.84
SEC23A-204ENST00000548032 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
SEC23A-204ENST00000548032 CAMTA1Q9Y6Y1 1673 aa20.29■□□□□ 0.84
SEC23A-204ENST00000548032 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
SEC23A-204ENST00000548032 LARP1Q6PKG0 1096 aaKnown RBP20.28■□□□□ 0.84
SEC23A-204ENST00000548032 KCNH5Q8NCM2 988 aa20.28■□□□□ 0.84
SEC23A-204ENST00000548032 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
SEC23A-204ENST00000548032 SPATA31A1Q5TZJ5 1347 aa20.27■□□□□ 0.84
SEC23A-204ENST00000548032 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.84
SEC23A-204ENST00000548032 KRT27Q7Z3Y8 459 aa20.27■□□□□ 0.84
SEC23A-204ENST00000548032 EDC4Q6P2E9 1401 aaKnown RBP20.27■□□□□ 0.83
SEC23A-204ENST00000548032 CDCA8Q53HL2 280 aa20.25■□□□□ 0.83
SEC23A-204ENST00000548032 LMO7Q8WWI1 1683 aa20.25■□□□□ 0.83
SEC23A-204ENST00000548032 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
SEC23A-204ENST00000548032 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
SEC23A-204ENST00000548032 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
SEC23A-204ENST00000548032 ARHGEF25Q86VW2 580 aa20.24■□□□□ 0.83
SEC23A-204ENST00000548032 USP31Q70CQ4 1352 aa20.23■□□□□ 0.83
SEC23A-204ENST00000548032 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
SEC23A-204ENST00000548032 BRWD3Q6RI45 1802 aa20.22■□□□□ 0.83
SEC23A-204ENST00000548032 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
SEC23A-204ENST00000548032 TCP11L2Q8N4U5 519 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms