RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 KIF20BQ96Q89 1820 aa15.86■□□□□ 0.13
CALCOCO1-208ENST00000547988 MED1Q15648 1581 aaPredicted RBP15.86■□□□□ 0.13
CALCOCO1-208ENST00000547988 PHRF1Q9P1Y6 1649 aaKnown RBP15.86■□□□□ 0.13
CALCOCO1-208ENST00000547988 ARHGEF10O15013 1369 aa15.86■□□□□ 0.13
CALCOCO1-208ENST00000547988 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
CALCOCO1-208ENST00000547988 TMC1Q8TDI8 760 aa15.84■□□□□ 0.13
CALCOCO1-208ENST00000547988 SPATA31A6Q5VVP1 1343 aa15.84■□□□□ 0.13
CALCOCO1-208ENST00000547988 SLC12A5Q9H2X9 1139 aa15.83■□□□□ 0.12
CALCOCO1-208ENST00000547988 TERF2IPQ9NYB0 399 aa15.83■□□□□ 0.12
CALCOCO1-208ENST00000547988 KTN1Q86UP2 1357 aaKnown RBP15.83■□□□□ 0.12
CALCOCO1-208ENST00000547988 ANKRD36BQ8N2N9 1353 aa15.83■□□□□ 0.12
CALCOCO1-208ENST00000547988 SSH2Q76I76 1423 aa15.83■□□□□ 0.12
CALCOCO1-208ENST00000547988 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
CALCOCO1-208ENST00000547988 A0A1W2PP64 1363 aa15.82■□□□□ 0.12
CALCOCO1-208ENST00000547988 EDC4Q6P2E9 1401 aaKnown RBP15.81■□□□□ 0.12
CALCOCO1-208ENST00000547988 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
CALCOCO1-208ENST00000547988 ANKRD26Q9UPS8 1709 aa15.8■□□□□ 0.12
CALCOCO1-208ENST00000547988 LRP6O75581 1613 aa15.79■□□□□ 0.12
CALCOCO1-208ENST00000547988 TTC21AQ8NDW8 1320 aa15.79■□□□□ 0.12
CALCOCO1-208ENST00000547988 C11orf95C9JLR9 678 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO1-208ENST00000547988 KIF7Q2M1P5 1343 aa15.78■□□□□ 0.12
CALCOCO1-208ENST00000547988 LMOD2Q6P5Q4 547 aa15.78■□□□□ 0.12
CALCOCO1-208ENST00000547988 TTC21BQ7Z4L5 1316 aa15.77■□□□□ 0.12
CALCOCO1-208ENST00000547988 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.12
CALCOCO1-208ENST00000547988 PLCH1Q4KWH8 1693 aa15.76■□□□□ 0.11
CALCOCO1-208ENST00000547988 CCDC7Q96M83 1385 aa15.76■□□□□ 0.11
CALCOCO1-208ENST00000547988 ABTB2Q8N961 1025 aa15.76■□□□□ 0.11
CALCOCO1-208ENST00000547988 LTN1O94822 1766 aa15.76■□□□□ 0.11
CALCOCO1-208ENST00000547988 NWD2Q9ULI1 1742 aa15.76■□□□□ 0.11
CALCOCO1-208ENST00000547988 SLIT3O75094 1523 aa15.75■□□□□ 0.11
CALCOCO1-208ENST00000547988 COL14A1Q05707 1796 aaKnown RBP15.75■□□□□ 0.11
CALCOCO1-208ENST00000547988 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.74■□□□□ 0.11
CALCOCO1-208ENST00000547988 NUTM2BA6NNL0 878 aaPredicted RBP15.74■□□□□ 0.11
CALCOCO1-208ENST00000547988 NUTM2EB1AL46 878 aaPredicted RBP15.74■□□□□ 0.11
CALCOCO1-208ENST00000547988 NUTM2AQ8IVF1 878 aaPredicted RBP15.74■□□□□ 0.11
CALCOCO1-208ENST00000547988 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
CALCOCO1-208ENST00000547988 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
CALCOCO1-208ENST00000547988 USP19O94966 1318 aa15.72■□□□□ 0.11
CALCOCO1-208ENST00000547988 NSD3Q9BZ95 1437 aa15.72■□□□□ 0.11
CALCOCO1-208ENST00000547988 USP31Q70CQ4 1352 aa15.72■□□□□ 0.11
CALCOCO1-208ENST00000547988 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
CALCOCO1-208ENST00000547988 NLRP6P59044 892 aa15.71■□□□□ 0.11
CALCOCO1-208ENST00000547988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.71■□□□□ 0.11
CALCOCO1-208ENST00000547988 CABLES1Q8TDN4 633 aa15.71■□□□□ 0.11
CALCOCO1-208ENST00000547988 RGPD5Q99666 1765 aa15.71■□□□□ 0.11
CALCOCO1-208ENST00000547988 OVOS2A0A0J9YW53 1432 aa15.7■□□□□ 0.1
CALCOCO1-208ENST00000547988 OVOS2Q6IE36 1432 aa15.7■□□□□ 0.1
CALCOCO1-208ENST00000547988 MEX3CQ5U5Q3 659 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-208ENST00000547988 NUTM2GQ5VZR2 741 aa15.7■□□□□ 0.1
CALCOCO1-208ENST00000547988 NRAPQ86VF7 1730 aa15.7■□□□□ 0.1
CALCOCO1-208ENST00000547988 NFAT5O94916 1531 aa15.69■□□□□ 0.1
CALCOCO1-208ENST00000547988 MAP2P11137 1827 aaKnown RBP15.69■□□□□ 0.1
CALCOCO1-208ENST00000547988 NME9Q86XW9 330 aa15.69■□□□□ 0.1
CALCOCO1-208ENST00000547988 CARD14Q9BXL6 1004 aa15.69■□□□□ 0.1
CALCOCO1-208ENST00000547988 COL18A1P39060 1754 aa15.68■□□□□ 0.1
CALCOCO1-208ENST00000547988 LMO7Q8WWI1 1683 aa15.68■□□□□ 0.1
CALCOCO1-208ENST00000547988 ADAMTS2O95450 1211 aa15.68■□□□□ 0.1
CALCOCO1-208ENST00000547988 PANK3Q9H999 370 aa15.68■□□□□ 0.1
CALCOCO1-208ENST00000547988 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
CALCOCO1-208ENST00000547988 ABCC6O95255 1503 aa15.67■□□□□ 0.1
CALCOCO1-208ENST00000547988 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
CALCOCO1-208ENST00000547988 CPDO75976 1380 aa15.66■□□□□ 0.1
CALCOCO1-208ENST00000547988 GCP02774 474 aa15.66■□□□□ 0.1
CALCOCO1-208ENST00000547988 KCNH5Q8NCM2 988 aa15.66■□□□□ 0.1
CALCOCO1-208ENST00000547988 SLIT2O94813 1529 aa15.65■□□□□ 0.1
CALCOCO1-208ENST00000547988 FYB1O15117 783 aa15.65■□□□□ 0.1
CALCOCO1-208ENST00000547988 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
CALCOCO1-208ENST00000547988 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
CALCOCO1-208ENST00000547988 NSD2O96028 1365 aa15.64■□□□□ 0.09
CALCOCO1-208ENST00000547988 COG3Q96JB2 828 aa15.64■□□□□ 0.09
CALCOCO1-208ENST00000547988 ZRANB1Q9UGI0 708 aa15.64■□□□□ 0.09
CALCOCO1-208ENST00000547988 KIAA0232Q92628 1395 aa15.63■□□□□ 0.09
CALCOCO1-208ENST00000547988 NGLY1Q96IV0 654 aa15.63■□□□□ 0.09
CALCOCO1-208ENST00000547988 AFF2P51816 1311 aa15.63■□□□□ 0.09
CALCOCO1-208ENST00000547988 FNBP4Q8N3X1 1017 aaPredicted RBP15.62■□□□□ 0.09
CALCOCO1-208ENST00000547988 GGNBP2Q9H3C7 697 aa15.62■□□□□ 0.09
CALCOCO1-208ENST00000547988 PRDM11Q9NQV5 511 aa15.62■□□□□ 0.09
CALCOCO1-208ENST00000547988 KNSTRNQ9Y448 316 aa15.62■□□□□ 0.09
CALCOCO1-208ENST00000547988 FAM208AQ9UK61 1670 aaKnown RBP15.62■□□□□ 0.09
CALCOCO1-208ENST00000547988 ZC3H6P61129 1189 aaKnown RBP15.61■□□□□ 0.09
CALCOCO1-208ENST00000547988 ZNF772Q68DY9 489 aaPredicted RBP15.61■□□□□ 0.09
CALCOCO1-208ENST00000547988 BCL9LQ86UU0 1499 aa15.6■□□□□ 0.09
CALCOCO1-208ENST00000547988 FAM83GA6ND36 823 aa15.6■□□□□ 0.09
CALCOCO1-208ENST00000547988 CAMTA1Q9Y6Y1 1673 aa15.6■□□□□ 0.09
CALCOCO1-208ENST00000547988 PER1O15534 1290 aaPredicted RBP15.59■□□□□ 0.09
CALCOCO1-208ENST00000547988 AATKQ6ZMQ8 1374 aa15.59■□□□□ 0.09
CALCOCO1-208ENST00000547988 NPC1L1Q9UHC9 1359 aa15.59■□□□□ 0.09
CALCOCO1-208ENST00000547988 WNK3Q9BYP7 1800 aa15.59■□□□□ 0.09
CALCOCO1-208ENST00000547988 PEAK1Q9H792 1746 aa15.58■□□□□ 0.08
CALCOCO1-208ENST00000547988 SOX12O15370 315 aa15.58■□□□□ 0.08
CALCOCO1-208ENST00000547988 ARHGEF25Q86VW2 580 aa15.58■□□□□ 0.08
CALCOCO1-208ENST00000547988 RGS17Q9UGC6 210 aaPredicted RBP15.58■□□□□ 0.08
CALCOCO1-208ENST00000547988 USP21Q9UK80 565 aa15.58■□□□□ 0.08
CALCOCO1-208ENST00000547988 CHRNA2Q15822 529 aa15.57■□□□□ 0.08
CALCOCO1-208ENST00000547988 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
CALCOCO1-208ENST00000547988 RGPD2P0DJD1 1756 aa15.57■□□□□ 0.08
CALCOCO1-208ENST00000547988 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
CALCOCO1-208ENST00000547988 BTG4Q9NY30 223 aa15.56■□□□□ 0.08
CALCOCO1-208ENST00000547988 ATRNO75882 1429 aa15.56■□□□□ 0.08
CALCOCO1-208ENST00000547988 COL5A2P05997 1499 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms