RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 WASLO00401 505 aaPredicted RBP17.14■□□□□ 0.33
HDAC7-226ENST00000547259 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
HDAC7-226ENST00000547259 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
HDAC7-226ENST00000547259 ADGRB1O14514 1584 aa17.14■□□□□ 0.33
HDAC7-226ENST00000547259 A0A0G2JS52 829 aa17.13■□□□□ 0.33
HDAC7-226ENST00000547259 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
HDAC7-226ENST00000547259 MYT1Q01538 1121 aa17.13■□□□□ 0.33
HDAC7-226ENST00000547259 TULP4Q9NRJ4 1543 aa17.12■□□□□ 0.33
HDAC7-226ENST00000547259 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
HDAC7-226ENST00000547259 MINK1Q8N4C8 1332 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-226ENST00000547259 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
HDAC7-226ENST00000547259 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-226ENST00000547259 BAG6P46379 1132 aa17.11■□□□□ 0.33
HDAC7-226ENST00000547259 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-226ENST00000547259 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
HDAC7-226ENST00000547259 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
HDAC7-226ENST00000547259 PAK3O75914 559 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-226ENST00000547259 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
HDAC7-226ENST00000547259 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
HDAC7-226ENST00000547259 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
HDAC7-226ENST00000547259 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
HDAC7-226ENST00000547259 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
HDAC7-226ENST00000547259 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
HDAC7-226ENST00000547259 ARHGEF28Q8N1W1 1705 aaKnown RBP17.06■□□□□ 0.32
HDAC7-226ENST00000547259 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
HDAC7-226ENST00000547259 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
HDAC7-226ENST00000547259 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
HDAC7-226ENST00000547259 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
HDAC7-226ENST00000547259 ATP7BP35670 1465 aa17.04■□□□□ 0.32
HDAC7-226ENST00000547259 RGPD1P0DJD0 1748 aa17.03■□□□□ 0.32
HDAC7-226ENST00000547259 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.32
HDAC7-226ENST00000547259 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
HDAC7-226ENST00000547259 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
HDAC7-226ENST00000547259 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
HDAC7-226ENST00000547259 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
HDAC7-226ENST00000547259 LRP5O75197 1615 aa16.99■□□□□ 0.31
HDAC7-226ENST00000547259 EVA1CP58658 441 aa16.99■□□□□ 0.31
HDAC7-226ENST00000547259 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
HDAC7-226ENST00000547259 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
HDAC7-226ENST00000547259 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
HDAC7-226ENST00000547259 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
HDAC7-226ENST00000547259 PLEKHG3A1L390 1219 aa16.98■□□□□ 0.31
HDAC7-226ENST00000547259 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
HDAC7-226ENST00000547259 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
HDAC7-226ENST00000547259 C11orf95C9JLR9 678 aaPredicted RBP16.97■□□□□ 0.31
HDAC7-226ENST00000547259 USP47Q96K76 1375 aa16.97■□□□□ 0.31
HDAC7-226ENST00000547259 ACEP12821 1306 aa16.96■□□□□ 0.31
HDAC7-226ENST00000547259 ZC3H6P61129 1189 aaKnown RBP16.96■□□□□ 0.31
HDAC7-226ENST00000547259 EN1Q05925 392 aaPredicted RBP16.96■□□□□ 0.31
HDAC7-226ENST00000547259 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
HDAC7-226ENST00000547259 BRD4O60885 1362 aaPredicted RBP16.96■□□□□ 0.31
HDAC7-226ENST00000547259 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.3
HDAC7-226ENST00000547259 PARD3Q8TEW0 1356 aa16.95■□□□□ 0.3
HDAC7-226ENST00000547259 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
HDAC7-226ENST00000547259 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
HDAC7-226ENST00000547259 NLRP13Q86W25 1043 aa16.95■□□□□ 0.3
HDAC7-226ENST00000547259 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
HDAC7-226ENST00000547259 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
HDAC7-226ENST00000547259 THRAP3Q9Y2W1 955 aaKnown RBP16.94■□□□□ 0.3
HDAC7-226ENST00000547259 TOPAZ1Q8N9V7 1692 aa16.93■□□□□ 0.3
HDAC7-226ENST00000547259 CPDO75976 1380 aa16.92■□□□□ 0.3
HDAC7-226ENST00000547259 PSDA5PKW4 1024 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-226ENST00000547259 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
HDAC7-226ENST00000547259 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
HDAC7-226ENST00000547259 FAM182BQ5T319 152 aa16.91■□□□□ 0.3
HDAC7-226ENST00000547259 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
HDAC7-226ENST00000547259 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
HDAC7-226ENST00000547259 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-226ENST00000547259 TNS1Q9HBL0 1735 aaKnown RBP16.9■□□□□ 0.3
HDAC7-226ENST00000547259 SSH2Q76I76 1423 aa16.9■□□□□ 0.3
HDAC7-226ENST00000547259 TRIM37O94972 964 aa16.9■□□□□ 0.3
HDAC7-226ENST00000547259 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
HDAC7-226ENST00000547259 APBA3O96018 575 aa16.89■□□□□ 0.29
HDAC7-226ENST00000547259 GCP02774 474 aa16.89■□□□□ 0.29
HDAC7-226ENST00000547259 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
HDAC7-226ENST00000547259 USP19O94966 1318 aa16.89■□□□□ 0.29
HDAC7-226ENST00000547259 R3HDM1Q15032 1099 aaKnown RBP16.88■□□□□ 0.29
HDAC7-226ENST00000547259 EZH2Q15910 746 aaKnown RBP16.88■□□□□ 0.29
HDAC7-226ENST00000547259 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
HDAC7-226ENST00000547259 CAMKK2Q96RR4 588 aa16.88■□□□□ 0.29
HDAC7-226ENST00000547259 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
HDAC7-226ENST00000547259 NRKQ7Z2Y5 1582 aa16.87■□□□□ 0.29
HDAC7-226ENST00000547259 CAMTA1Q9Y6Y1 1673 aa16.86■□□□□ 0.29
HDAC7-226ENST00000547259 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
HDAC7-226ENST00000547259 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
HDAC7-226ENST00000547259 LMO7Q8WWI1 1683 aa16.85■□□□□ 0.29
HDAC7-226ENST00000547259 NLRP6P59044 892 aa16.84■□□□□ 0.29
HDAC7-226ENST00000547259 ZNF692Q9BU19 519 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-226ENST00000547259 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
HDAC7-226ENST00000547259 SBNO2Q9Y2G9 1366 aa16.84■□□□□ 0.29
HDAC7-226ENST00000547259 EVC2Q86UK5 1308 aa16.83■□□□□ 0.28
HDAC7-226ENST00000547259 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
HDAC7-226ENST00000547259 CRB1P82279 1406 aa16.82■□□□□ 0.28
HDAC7-226ENST00000547259 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
HDAC7-226ENST00000547259 COL5A2P05997 1499 aaPredicted RBP16.81■□□□□ 0.28
HDAC7-226ENST00000547259 USP6P35125 1406 aa16.81■□□□□ 0.28
HDAC7-226ENST00000547259 AATKQ6ZMQ8 1374 aa16.81■□□□□ 0.28
HDAC7-226ENST00000547259 CDCA7Q9BWT1 371 aaPredicted RBP16.81■□□□□ 0.28
HDAC7-226ENST00000547259 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
HDAC7-226ENST00000547259 RREB1Q92766 1687 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms