RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 CGNL1Q0VF96 1302 aa22.02■■□□□ 1.11
BRF1-208ENST00000546997 NRKQ7Z2Y5 1582 aa22.01■■□□□ 1.11
BRF1-208ENST00000546997 PLEKHG3A1L390 1219 aa22.01■■□□□ 1.11
BRF1-208ENST00000546997 ANKRD26Q9UPS8 1709 aa22.01■■□□□ 1.11
BRF1-208ENST00000546997 MYBBP1AQ9BQG0 1328 aaKnown RBP22■■□□□ 1.11
BRF1-208ENST00000546997 NCOA3Q9Y6Q9 1424 aa22■■□□□ 1.11
BRF1-208ENST00000546997 C19orf44Q9H6X5 657 aa22■■□□□ 1.11
BRF1-208ENST00000546997 ACEP12821 1306 aa22■■□□□ 1.11
BRF1-208ENST00000546997 PMFBP1Q8TBY8 1022 aa21.99■■□□□ 1.11
BRF1-208ENST00000546997 EDC4Q6P2E9 1401 aaKnown RBP21.98■■□□□ 1.11
BRF1-208ENST00000546997 POLR3AO14802 1390 aaPredicted RBP21.97■■□□□ 1.11
BRF1-208ENST00000546997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
BRF1-208ENST00000546997 DCCP43146 1447 aa21.96■■□□□ 1.11
BRF1-208ENST00000546997 NSD2O96028 1365 aa21.96■■□□□ 1.11
BRF1-208ENST00000546997 USP6P35125 1406 aa21.96■■□□□ 1.11
BRF1-208ENST00000546997 FYB1O15117 783 aa21.95■■□□□ 1.1
BRF1-208ENST00000546997 GGNBP2Q9H3C7 697 aa21.94■■□□□ 1.1
BRF1-208ENST00000546997 LTBP4Q8N2S1 1624 aa21.94■■□□□ 1.1
BRF1-208ENST00000546997 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
BRF1-208ENST00000546997 MST1RQ04912 1400 aa21.93■■□□□ 1.1
BRF1-208ENST00000546997 MSH6P52701 1360 aa21.93■■□□□ 1.1
BRF1-208ENST00000546997 C1orf167Q5SNV9 1468 aa21.93■■□□□ 1.1
BRF1-208ENST00000546997 PPP2R1AP30153 589 aa21.92■■□□□ 1.1
BRF1-208ENST00000546997 NLRP13Q86W25 1043 aa21.92■■□□□ 1.1
BRF1-208ENST00000546997 NGDNQ8NEJ9 315 aaKnown RBP21.92■■□□□ 1.1
BRF1-208ENST00000546997 ATF3P18847 181 aa21.92■■□□□ 1.1
BRF1-208ENST00000546997 ESCO1Q5FWF5 840 aa21.92■■□□□ 1.1
BRF1-208ENST00000546997 PHF8Q9UPP1 1060 aa21.92■■□□□ 1.1
BRF1-208ENST00000546997 SSH2Q76I76 1423 aa21.91■■□□□ 1.1
BRF1-208ENST00000546997 MORC1Q86VD1 984 aa21.91■■□□□ 1.1
BRF1-208ENST00000546997 ORAI2Q96SN7 254 aa21.91■■□□□ 1.1
BRF1-208ENST00000546997 BRD4O60885 1362 aaPredicted RBP21.91■■□□□ 1.1
BRF1-208ENST00000546997 NME9Q86XW9 330 aa21.9■■□□□ 1.1
BRF1-208ENST00000546997 PNISRQ8TF01 805 aaKnown RBP21.9■■□□□ 1.1
BRF1-208ENST00000546997 TNNT2P45379 298 aaPredicted RBP21.9■■□□□ 1.1
BRF1-208ENST00000546997 ZBED9Q6R2W3 1325 aa21.9■■□□□ 1.1
BRF1-208ENST00000546997 TTC21BQ7Z4L5 1316 aa21.89■■□□□ 1.09
BRF1-208ENST00000546997 KIF1AQ12756 1690 aa21.88■■□□□ 1.09
BRF1-208ENST00000546997 CADPS2Q86UW7 1296 aa21.88■■□□□ 1.09
BRF1-208ENST00000546997 PIK3C2AO00443 1686 aa21.87■■□□□ 1.09
BRF1-208ENST00000546997 ZRANB1Q9UGI0 708 aa21.87■■□□□ 1.09
BRF1-208ENST00000546997 DAXXQ9UER7 740 aaPredicted RBP21.86■■□□□ 1.09
BRF1-208ENST00000546997 MARF1Q9Y4F3 1742 aaKnown RBP21.83■■□□□ 1.09
BRF1-208ENST00000546997 MAP2P11137 1827 aaKnown RBP21.83■■□□□ 1.09
BRF1-208ENST00000546997 FOXO3O43524 673 aa21.82■■□□□ 1.08
BRF1-208ENST00000546997 DEKP35659 375 aaKnown RBP21.82■■□□□ 1.08
BRF1-208ENST00000546997 PPP4R3CPQ6ZMV5 832 aa21.82■■□□□ 1.08
BRF1-208ENST00000546997 OVOS2A0A0J9YW53 1432 aa21.82■■□□□ 1.08
BRF1-208ENST00000546997 OVOS2Q6IE36 1432 aa21.82■■□□□ 1.08
BRF1-208ENST00000546997 TRPM3Q9HCF6 1732 aaPredicted RBP21.81■■□□□ 1.08
BRF1-208ENST00000546997 TTC21AQ8NDW8 1320 aa21.81■■□□□ 1.08
BRF1-208ENST00000546997 FBLN1P23142 703 aa21.79■■□□□ 1.08
BRF1-208ENST00000546997 XPCQ01831 940 aaPredicted RBP21.79■■□□□ 1.08
BRF1-208ENST00000546997 PSME1Q06323 249 aa21.79■■□□□ 1.08
BRF1-208ENST00000546997 COG3Q96JB2 828 aa21.79■■□□□ 1.08
BRF1-208ENST00000546997 USP54Q70EL1 1684 aa21.78■■□□□ 1.08
BRF1-208ENST00000546997 PAK3O75914 559 aaPredicted RBP21.77■■□□□ 1.08
BRF1-208ENST00000546997 MTHFSP49914 203 aa21.77■■□□□ 1.08
BRF1-208ENST00000546997 DDX17Q92841 729 aaKnown RBP21.77■■□□□ 1.08
BRF1-208ENST00000546997 NOP58Q9Y2X3 529 aaKnown RBP21.77■■□□□ 1.08
BRF1-208ENST00000546997 SLAIN2Q9P270 581 aa21.76■■□□□ 1.07
BRF1-208ENST00000546997 SHPRHQ149N8 1683 aa21.76■■□□□ 1.07
BRF1-208ENST00000546997 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
BRF1-208ENST00000546997 USP31Q70CQ4 1352 aa21.75■■□□□ 1.07
BRF1-208ENST00000546997 NUTM2GQ5VZR2 741 aa21.74■■□□□ 1.07
BRF1-208ENST00000546997 ABTB2Q8N961 1025 aa21.74■■□□□ 1.07
BRF1-208ENST00000546997 ALS2Q96Q42 1657 aa21.73■■□□□ 1.07
BRF1-208ENST00000546997 IRX6P78412 446 aaPredicted RBP21.72■■□□□ 1.07
BRF1-208ENST00000546997 AATKQ6ZMQ8 1374 aa21.72■■□□□ 1.07
BRF1-208ENST00000546997 NLRP6P59044 892 aa21.72■■□□□ 1.07
BRF1-208ENST00000546997 KRT28Q7Z3Y7 464 aa21.72■■□□□ 1.07
BRF1-208ENST00000546997 PXDNQ92626 1479 aa21.71■■□□□ 1.07
BRF1-208ENST00000546997 POLKQ9UBT6 870 aa21.71■■□□□ 1.07
BRF1-208ENST00000546997 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
BRF1-208ENST00000546997 SMG6Q86US8 1419 aaKnown RBP21.7■■□□□ 1.06
BRF1-208ENST00000546997 NPHP3Q7Z494 1330 aa21.7■■□□□ 1.06
BRF1-208ENST00000546997 RRS1Q15050 365 aaKnown RBP21.7■■□□□ 1.06
BRF1-208ENST00000546997 EMILIN1Q9Y6C2 1016 aa21.7■■□□□ 1.06
BRF1-208ENST00000546997 SOX12O15370 315 aa21.69■■□□□ 1.06
BRF1-208ENST00000546997 PEAK1Q9H792 1746 aa21.69■■□□□ 1.06
BRF1-208ENST00000546997 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
BRF1-208ENST00000546997 NHSL1Q5SYE7 1610 aa21.68■■□□□ 1.06
BRF1-208ENST00000546997 ROBO1Q9Y6N7 1651 aa21.67■■□□□ 1.06
BRF1-208ENST00000546997 PPM1GO15355 546 aaPredicted RBP21.67■■□□□ 1.06
BRF1-208ENST00000546997 PNPLA6Q8IY17 1366 aa21.66■■□□□ 1.06
BRF1-208ENST00000546997 CDK12Q9NYV4 1490 aaPredicted RBP21.66■■□□□ 1.06
BRF1-208ENST00000546997 ADAMTS8Q9UP79 889 aa21.66■■□□□ 1.06
BRF1-208ENST00000546997 LTN1O94822 1766 aa21.66■■□□□ 1.06
BRF1-208ENST00000546997 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
BRF1-208ENST00000546997 IQSEC2Q5JU85 1478 aa21.65■■□□□ 1.06
BRF1-208ENST00000546997 RNF123Q5XPI4 1314 aa21.65■■□□□ 1.06
BRF1-208ENST00000546997 INSRP06213 1382 aa21.65■■□□□ 1.06
BRF1-208ENST00000546997 WDR43Q15061 677 aaKnown RBP eCLIP21.65■■□□□ 1.06
BRF1-208ENST00000546997 LMOD2Q6P5Q4 547 aa21.65■■□□□ 1.06
BRF1-208ENST00000546997 SBNO1A3KN83 1393 aa21.64■■□□□ 1.05
BRF1-208ENST00000546997 NFAT5O94916 1531 aa21.64■■□□□ 1.05
BRF1-208ENST00000546997 BLMP54132 1417 aaPredicted RBP21.63■■□□□ 1.05
BRF1-208ENST00000546997 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
BRF1-208ENST00000546997 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
BRF1-208ENST00000546997 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms