RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
RFX4-207ENST00000546882 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
RFX4-207ENST00000546882 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
RFX4-207ENST00000546882 NWD2Q9ULI1 1742 aa13.2□□□□□ -0.3
RFX4-207ENST00000546882 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
RFX4-207ENST00000546882 R3HDM1Q15032 1099 aaKnown RBP13.2□□□□□ -0.3
RFX4-207ENST00000546882 PLCH1Q4KWH8 1693 aa13.19□□□□□ -0.3
RFX4-207ENST00000546882 GABBR2O75899 941 aa13.19□□□□□ -0.3
RFX4-207ENST00000546882 YY1P25490 414 aa13.19□□□□□ -0.3
RFX4-207ENST00000546882 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
RFX4-207ENST00000546882 KIF1BO60333 1816 aa13.18□□□□□ -0.3
RFX4-207ENST00000546882 NAIPQ13075 1403 aa13.17□□□□□ -0.3
RFX4-207ENST00000546882 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
RFX4-207ENST00000546882 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
RFX4-207ENST00000546882 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
RFX4-207ENST00000546882 DISP2A7MBM2 1401 aa13.16□□□□□ -0.3
RFX4-207ENST00000546882 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
RFX4-207ENST00000546882 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
RFX4-207ENST00000546882 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
RFX4-207ENST00000546882 TNS1Q9HBL0 1735 aaKnown RBP13.15□□□□□ -0.3
RFX4-207ENST00000546882 CCDC144AA2RUR9 1427 aa13.14□□□□□ -0.31
RFX4-207ENST00000546882 ABCA3Q99758 1704 aa13.14□□□□□ -0.31
RFX4-207ENST00000546882 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
RFX4-207ENST00000546882 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
RFX4-207ENST00000546882 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
RFX4-207ENST00000546882 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
RFX4-207ENST00000546882 KIF1AQ12756 1690 aa13.13□□□□□ -0.31
RFX4-207ENST00000546882 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
RFX4-207ENST00000546882 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
RFX4-207ENST00000546882 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
RFX4-207ENST00000546882 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
RFX4-207ENST00000546882 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
RFX4-207ENST00000546882 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
RFX4-207ENST00000546882 PPLO60437 1756 aa13.12□□□□□ -0.31
RFX4-207ENST00000546882 CAMKK2Q96RR4 588 aa13.12□□□□□ -0.31
RFX4-207ENST00000546882 TECPR2O15040 1411 aa13.12□□□□□ -0.31
RFX4-207ENST00000546882 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
RFX4-207ENST00000546882 FAM212AQ96EL1 285 aa13.11□□□□□ -0.31
RFX4-207ENST00000546882 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
RFX4-207ENST00000546882 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
RFX4-207ENST00000546882 A0A0G2JS52 829 aa13.1□□□□□ -0.31
RFX4-207ENST00000546882 MYT1Q01538 1121 aa13.1□□□□□ -0.31
RFX4-207ENST00000546882 HAP1P54257 671 aaPredicted RBP13.09□□□□□ -0.31
RFX4-207ENST00000546882 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
RFX4-207ENST00000546882 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.31
RFX4-207ENST00000546882 SBNO1A3KN83 1393 aa13.08□□□□□ -0.31
RFX4-207ENST00000546882 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
RFX4-207ENST00000546882 CLCN6P51797 869 aa13.07□□□□□ -0.32
RFX4-207ENST00000546882 BTG4Q9NY30 223 aa13.07□□□□□ -0.32
RFX4-207ENST00000546882 STK26Q9P289 416 aa13.07□□□□□ -0.32
RFX4-207ENST00000546882 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
RFX4-207ENST00000546882 PSME1Q06323 249 aa13.06□□□□□ -0.32
RFX4-207ENST00000546882 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
RFX4-207ENST00000546882 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
RFX4-207ENST00000546882 ADGRF5Q8IZF2 1346 aa13.06□□□□□ -0.32
RFX4-207ENST00000546882 ARHGEF10O15013 1369 aa13.06□□□□□ -0.32
RFX4-207ENST00000546882 RREB1Q92766 1687 aa13.05□□□□□ -0.32
RFX4-207ENST00000546882 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
RFX4-207ENST00000546882 NRXN1Q9ULB1 1477 aa13.05□□□□□ -0.32
RFX4-207ENST00000546882 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
RFX4-207ENST00000546882 ITGAEP38570 1179 aa13.05□□□□□ -0.32
RFX4-207ENST00000546882 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
RFX4-207ENST00000546882 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
RFX4-207ENST00000546882 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
RFX4-207ENST00000546882 UTRNP46939 3433 aa13.04□□□□□ -0.32
RFX4-207ENST00000546882 TRIM37O94972 964 aa13.04□□□□□ -0.32
RFX4-207ENST00000546882 TMEM132EQ6IEE7 984 aa13.04□□□□□ -0.32
RFX4-207ENST00000546882 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
RFX4-207ENST00000546882 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
RFX4-207ENST00000546882 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
RFX4-207ENST00000546882 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
RFX4-207ENST00000546882 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
RFX4-207ENST00000546882 APBA3O96018 575 aa13.02□□□□□ -0.33
RFX4-207ENST00000546882 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
RFX4-207ENST00000546882 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
RFX4-207ENST00000546882 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.33
RFX4-207ENST00000546882 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.33
RFX4-207ENST00000546882 ALS2Q96Q42 1657 aa13□□□□□ -0.33
RFX4-207ENST00000546882 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
RFX4-207ENST00000546882 KCNQ2O43526 872 aa13□□□□□ -0.33
RFX4-207ENST00000546882 IFFO2Q5TF58 517 aa13□□□□□ -0.33
RFX4-207ENST00000546882 ZNF784Q8NCA9 323 aaPredicted RBP13□□□□□ -0.33
RFX4-207ENST00000546882 SIRT1Q96EB6 747 aa13□□□□□ -0.33
RFX4-207ENST00000546882 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
RFX4-207ENST00000546882 SPON1Q9HCB6 807 aa13□□□□□ -0.33
RFX4-207ENST00000546882 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
RFX4-207ENST00000546882 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
RFX4-207ENST00000546882 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
RFX4-207ENST00000546882 MAP3K13O43283 966 aa12.98□□□□□ -0.33
RFX4-207ENST00000546882 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
RFX4-207ENST00000546882 PPP1R1BQ9UD71 204 aaPredicted RBP12.98□□□□□ -0.33
RFX4-207ENST00000546882 GSE1Q14687 1217 aa12.97□□□□□ -0.33
RFX4-207ENST00000546882 NBPF8Q3BBV2 869 aa12.97□□□□□ -0.33
RFX4-207ENST00000546882 NBPF14Q5TI25 921 aa12.97□□□□□ -0.33
RFX4-207ENST00000546882 PIK3C2GO75747 1445 aa12.96□□□□□ -0.33
RFX4-207ENST00000546882 SPATA31E1Q6ZUB1 1445 aa12.96□□□□□ -0.33
RFX4-207ENST00000546882 CEP350Q5VT06 3117 aa12.96□□□□□ -0.34
RFX4-207ENST00000546882 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
RFX4-207ENST00000546882 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
RFX4-207ENST00000546882 PYGBP11216 843 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms