RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 CFAP99D6REC4 459 aa12.65□□□□□ -0.38
CHPT1-203ENST00000546873 LCE2BO14633 110 aa12.65□□□□□ -0.38
CHPT1-203ENST00000546873 MYT1Q01538 1121 aa12.65□□□□□ -0.38
CHPT1-203ENST00000546873 LYPD8Q6UX82 237 aa12.65□□□□□ -0.38
CHPT1-203ENST00000546873 HELBQ8NG08 1087 aaPredicted RBP12.64□□□□□ -0.39
CHPT1-203ENST00000546873 UNC93B1Q9H1C4 597 aa12.64□□□□□ -0.39
CHPT1-203ENST00000546873 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
CHPT1-203ENST00000546873 NESP48681 1621 aa12.62□□□□□ -0.39
CHPT1-203ENST00000546873 LILRB3O75022 631 aa12.62□□□□□ -0.39
CHPT1-203ENST00000546873 SKOR1P84550 965 aa12.62□□□□□ -0.39
CHPT1-203ENST00000546873 QPCTQ16769 361 aa12.62□□□□□ -0.39
CHPT1-203ENST00000546873 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
CHPT1-203ENST00000546873 SKIV2LQ15477 1246 aaKnown RBP12.59□□□□□ -0.39
CHPT1-203ENST00000546873 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
CHPT1-203ENST00000546873 SH3D19Q5HYK7 790 aa12.58□□□□□ -0.4
CHPT1-203ENST00000546873 ZNF787Q6DD87 383 aa12.58□□□□□ -0.4
CHPT1-203ENST00000546873 SH3BP2P78314 561 aa12.57□□□□□ -0.4
CHPT1-203ENST00000546873 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
CHPT1-203ENST00000546873 BAP1Q92560 729 aa12.57□□□□□ -0.4
CHPT1-203ENST00000546873 AVPP01185 164 aa12.56□□□□□ -0.4
CHPT1-203ENST00000546873 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
CHPT1-203ENST00000546873 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
CHPT1-203ENST00000546873 AXIN1O15169 862 aa12.55□□□□□ -0.4
CHPT1-203ENST00000546873 ALDH1A1P00352 501 aa12.55□□□□□ -0.4
CHPT1-203ENST00000546873 SMPD1P17405 629 aa12.55□□□□□ -0.4
CHPT1-203ENST00000546873 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
CHPT1-203ENST00000546873 ZNF511Q8NB15 262 aa12.55□□□□□ -0.4
CHPT1-203ENST00000546873 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
CHPT1-203ENST00000546873 ARMC2Q8NEN0 867 aa12.54□□□□□ -0.4
CHPT1-203ENST00000546873 AAASQ9NRG9 546 aa12.54□□□□□ -0.4
CHPT1-203ENST00000546873 MAP10Q9P2G4 905 aa12.54□□□□□ -0.4
CHPT1-203ENST00000546873 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
CHPT1-203ENST00000546873 J3QL48 77 aa12.53□□□□□ -0.4
CHPT1-203ENST00000546873 ST8SIA5O15466 376 aa12.53□□□□□ -0.4
CHPT1-203ENST00000546873 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
CHPT1-203ENST00000546873 F12P00748 615 aaPredicted RBP12.53□□□□□ -0.4
CHPT1-203ENST00000546873 WASF2Q9Y6W5 498 aa12.52□□□□□ -0.41
CHPT1-203ENST00000546873 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
CHPT1-203ENST00000546873 VARSP26640 1264 aaKnown RBP12.51□□□□□ -0.41
CHPT1-203ENST00000546873 AGERQ15109 404 aa12.51□□□□□ -0.41
CHPT1-203ENST00000546873 SMCPP49901 116 aaPredicted RBP12.5□□□□□ -0.41
CHPT1-203ENST00000546873 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
CHPT1-203ENST00000546873 PROCA1Q8NCQ7 364 aaPredicted RBP12.49□□□□□ -0.41
CHPT1-203ENST00000546873 FAM174AQ8TBP5 190 aa12.49□□□□□ -0.41
CHPT1-203ENST00000546873 SIAH2O43255 324 aa12.48□□□□□ -0.41
CHPT1-203ENST00000546873 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
CHPT1-203ENST00000546873 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
CHPT1-203ENST00000546873 BPHLQ86WA6 291 aaPredicted RBP12.46□□□□□ -0.41
CHPT1-203ENST00000546873 HPS1Q92902 700 aa12.46□□□□□ -0.41
CHPT1-203ENST00000546873 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.41
CHPT1-203ENST00000546873 PPP2R2DQ66LE6 453 aa12.45□□□□□ -0.42
CHPT1-203ENST00000546873 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHPT1-203ENST00000546873 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
CHPT1-203ENST00000546873 CTDSPL2Q05D32 466 aa12.44□□□□□ -0.42
CHPT1-203ENST00000546873 MPNDQ8N594 471 aa12.43□□□□□ -0.42
CHPT1-203ENST00000546873 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
CHPT1-203ENST00000546873 FOXJ1Q92949 421 aa12.43□□□□□ -0.42
CHPT1-203ENST00000546873 GOPCQ9HD26 462 aa12.43□□□□□ -0.42
CHPT1-203ENST00000546873 AP1G2O75843 785 aa12.42□□□□□ -0.42
CHPT1-203ENST00000546873 TLL2Q9Y6L7 1015 aa12.42□□□□□ -0.42
CHPT1-203ENST00000546873 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
CHPT1-203ENST00000546873 ARID5BQ14865 1188 aa12.4□□□□□ -0.42
CHPT1-203ENST00000546873 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
CHPT1-203ENST00000546873 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
CHPT1-203ENST00000546873 DACH1Q9UI36 760 aa12.39□□□□□ -0.43
CHPT1-203ENST00000546873 POTECB2RU33 542 aa12.38□□□□□ -0.43
CHPT1-203ENST00000546873 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
CHPT1-203ENST00000546873 LRRN4Q8WUT4 740 aa12.38□□□□□ -0.43
CHPT1-203ENST00000546873 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
CHPT1-203ENST00000546873 ATP13A2Q9NQ11 1180 aa12.38□□□□□ -0.43
CHPT1-203ENST00000546873 KIF21AQ7Z4S6 1674 aa12.38□□□□□ -0.43
CHPT1-203ENST00000546873 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
CHPT1-203ENST00000546873 CAPN5O15484 640 aaPredicted RBP12.37□□□□□ -0.43
CHPT1-203ENST00000546873 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
CHPT1-203ENST00000546873 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
CHPT1-203ENST00000546873 NNTQ13423 1086 aa12.36□□□□□ -0.43
CHPT1-203ENST00000546873 ADH1CP00326 375 aa12.35□□□□□ -0.43
CHPT1-203ENST00000546873 RFC5P40937 340 aa12.35□□□□□ -0.43
CHPT1-203ENST00000546873 CDK15Q96Q40 435 aa12.35□□□□□ -0.43
CHPT1-203ENST00000546873 FKBPLQ9UIM3 349 aa12.35□□□□□ -0.43
CHPT1-203ENST00000546873 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-203ENST00000546873 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
CHPT1-203ENST00000546873 NR5A1Q13285 461 aa12.33□□□□□ -0.44
CHPT1-203ENST00000546873 NR6A1Q15406 480 aa12.33□□□□□ -0.44
CHPT1-203ENST00000546873 TMEM259Q4ZIN3 620 aa12.33□□□□□ -0.44
CHPT1-203ENST00000546873 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
CHPT1-203ENST00000546873 CARD14Q9BXL6 1004 aa12.33□□□□□ -0.44
CHPT1-203ENST00000546873 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
CHPT1-203ENST00000546873 USP17L8P0C7I0 530 aa12.32□□□□□ -0.44
CHPT1-203ENST00000546873 C4orf48Q5BLP8 95 aa12.32□□□□□ -0.44
CHPT1-203ENST00000546873 FBXO31Q5XUX0 539 aaPredicted RBP12.32□□□□□ -0.44
CHPT1-203ENST00000546873 PDXDC2PQ6P474 469 aa12.32□□□□□ -0.44
CHPT1-203ENST00000546873 SH3BP5LQ7L8J4 393 aa12.32□□□□□ -0.44
CHPT1-203ENST00000546873 SH3RF1Q7Z6J0 888 aa12.31□□□□□ -0.44
CHPT1-203ENST00000546873 ZNF775Q96BV0 537 aaPredicted RBP12.31□□□□□ -0.44
CHPT1-203ENST00000546873 ARHGAP9Q9BRR9 750 aa12.31□□□□□ -0.44
CHPT1-203ENST00000546873 C1QTNF2Q9BXJ5 285 aa12.3□□□□□ -0.44
CHPT1-203ENST00000546873 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
CHPT1-203ENST00000546873 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
CHPT1-203ENST00000546873 ZBTB33Q86T24 672 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms