RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 FAM160A2Q8N612 972 aaPredicted RBP11.77□□□□□ -0.53
NPAS3-204ENST00000546849 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
NPAS3-204ENST00000546849 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
NPAS3-204ENST00000546849 ARID3AQ99856 593 aa11.76□□□□□ -0.53
NPAS3-204ENST00000546849 MMP16P51512 607 aa11.75□□□□□ -0.53
NPAS3-204ENST00000546849 EPS8L1Q8TE68 723 aa11.75□□□□□ -0.53
NPAS3-204ENST00000546849 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
NPAS3-204ENST00000546849 LCE2BO14633 110 aa11.74□□□□□ -0.53
NPAS3-204ENST00000546849 FNBP4Q8N3X1 1017 aaPredicted RBP11.74□□□□□ -0.53
NPAS3-204ENST00000546849 ARMC2Q8NEN0 867 aa11.73□□□□□ -0.53
NPAS3-204ENST00000546849 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
NPAS3-204ENST00000546849 S1PR4O95977 384 aa11.72□□□□□ -0.53
NPAS3-204ENST00000546849 GGCXP38435 758 aa11.72□□□□□ -0.53
NPAS3-204ENST00000546849 FKBPLQ9UIM3 349 aa11.72□□□□□ -0.53
NPAS3-204ENST00000546849 F12P00748 615 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-204ENST00000546849 KCNH2Q12809 1159 aa11.71□□□□□ -0.53
NPAS3-204ENST00000546849 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
NPAS3-204ENST00000546849 NBPF14Q5TI25 921 aa11.7□□□□□ -0.54
NPAS3-204ENST00000546849 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
NPAS3-204ENST00000546849 VAC14Q08AM6 782 aa11.69□□□□□ -0.54
NPAS3-204ENST00000546849 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
NPAS3-204ENST00000546849 NRG2O14511 850 aaPredicted RBP11.68□□□□□ -0.54
NPAS3-204ENST00000546849 IRF5Q13568 498 aa11.68□□□□□ -0.54
NPAS3-204ENST00000546849 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
NPAS3-204ENST00000546849 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
NPAS3-204ENST00000546849 FCF1Q9Y324 198 aaKnown RBP11.67□□□□□ -0.54
NPAS3-204ENST00000546849 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
NPAS3-204ENST00000546849 GLMNQ92990 594 aa11.66□□□□□ -0.54
NPAS3-204ENST00000546849 EMID1Q96A84 441 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-204ENST00000546849 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
NPAS3-204ENST00000546849 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
NPAS3-204ENST00000546849 POM121CA8CG34 1229 aa11.65□□□□□ -0.54
NPAS3-204ENST00000546849 EIF4G2P78344 907 aaKnown RBP eCLIP11.65□□□□□ -0.54
NPAS3-204ENST00000546849 GPKOWQ92917 476 aaPredicted RBP eCLIP11.65□□□□□ -0.54
NPAS3-204ENST00000546849 UNC93B1Q9H1C4 597 aa11.65□□□□□ -0.54
NPAS3-204ENST00000546849 ZBTB24O43167 697 aaPredicted RBP11.64□□□□□ -0.55
NPAS3-204ENST00000546849 SOX11P35716 441 aa11.64□□□□□ -0.55
NPAS3-204ENST00000546849 PTK2Q05397 1052 aa11.64□□□□□ -0.55
NPAS3-204ENST00000546849 NR1H3Q13133 447 aa11.64□□□□□ -0.55
NPAS3-204ENST00000546849 SEMA3FQ13275 785 aa11.64□□□□□ -0.55
NPAS3-204ENST00000546849 ZBBXA8MT70 800 aa11.63□□□□□ -0.55
NPAS3-204ENST00000546849 GPR37L1O60883 481 aa11.62□□□□□ -0.55
NPAS3-204ENST00000546849 AGERQ15109 404 aa11.62□□□□□ -0.55
NPAS3-204ENST00000546849 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
NPAS3-204ENST00000546849 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
NPAS3-204ENST00000546849 PPEF1O14829 653 aaPredicted RBP11.61□□□□□ -0.55
NPAS3-204ENST00000546849 SLC19A1P41440 591 aa11.6□□□□□ -0.55
NPAS3-204ENST00000546849 HDGFL1Q5TGJ6 251 aa11.6□□□□□ -0.55
NPAS3-204ENST00000546849 PDXDC2PQ6P474 469 aa11.6□□□□□ -0.55
NPAS3-204ENST00000546849 ARXQ96QS3 562 aa11.6□□□□□ -0.55
NPAS3-204ENST00000546849 GPSM3Q9Y4H4 160 aa11.6□□□□□ -0.55
NPAS3-204ENST00000546849 FBXO45P0C2W1 286 aa11.59□□□□□ -0.55
NPAS3-204ENST00000546849 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
NPAS3-204ENST00000546849 ANKLE1Q8NAG6 615 aa11.59□□□□□ -0.55
NPAS3-204ENST00000546849 ARHGAP9Q9BRR9 750 aa11.59□□□□□ -0.55
NPAS3-204ENST00000546849 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
NPAS3-204ENST00000546849 ZBTB33Q86T24 672 aa11.58□□□□□ -0.56
NPAS3-204ENST00000546849 LINC01559Q495D7 138 aa11.57□□□□□ -0.56
NPAS3-204ENST00000546849 SPRYD7Q5W111 196 aa11.57□□□□□ -0.56
NPAS3-204ENST00000546849 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
NPAS3-204ENST00000546849 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
NPAS3-204ENST00000546849 LIAT1Q6ZQX7 453 aa11.56□□□□□ -0.56
NPAS3-204ENST00000546849 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
NPAS3-204ENST00000546849 PCDHB9Q9Y5E1 797 aa11.56□□□□□ -0.56
NPAS3-204ENST00000546849 BAP1Q92560 729 aa11.55□□□□□ -0.56
NPAS3-204ENST00000546849 BPHLQ86WA6 291 aaPredicted RBP11.54□□□□□ -0.56
NPAS3-204ENST00000546849 ZNF598Q86UK7 904 aaKnown RBP11.53□□□□□ -0.56
NPAS3-204ENST00000546849 ZNF511Q8NB15 262 aa11.53□□□□□ -0.56
NPAS3-204ENST00000546849 ADAM32Q8TC27 787 aa11.52□□□□□ -0.57
NPAS3-204ENST00000546849 MCCD1P59942 119 aaPredicted RBP11.51□□□□□ -0.57
NPAS3-204ENST00000546849 PLA2G2CQ5R387 149 aa11.51□□□□□ -0.57
NPAS3-204ENST00000546849 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
NPAS3-204ENST00000546849 ALG2Q9H553 416 aa11.51□□□□□ -0.57
NPAS3-204ENST00000546849 TRIM32Q13049 653 aa11.5□□□□□ -0.57
NPAS3-204ENST00000546849 ADAMTS19Q8TE59 1207 aa11.5□□□□□ -0.57
NPAS3-204ENST00000546849 SH3BP5LQ7L8J4 393 aa11.49□□□□□ -0.57
NPAS3-204ENST00000546849 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
NPAS3-204ENST00000546849 PRR20EP86478 221 aa11.48□□□□□ -0.57
NPAS3-204ENST00000546849 PRR20CP86479 221 aa11.48□□□□□ -0.57
NPAS3-204ENST00000546849 PRR20DP86480 221 aa11.48□□□□□ -0.57
NPAS3-204ENST00000546849 PRR20BP86481 221 aa11.48□□□□□ -0.57
NPAS3-204ENST00000546849 PRR20AP86496 221 aa11.48□□□□□ -0.57
NPAS3-204ENST00000546849 GDF9O60383 454 aa11.47□□□□□ -0.57
NPAS3-204ENST00000546849 CD2BP2O95400 341 aaKnown RBP11.47□□□□□ -0.57
NPAS3-204ENST00000546849 RPIAP49247 311 aa11.47□□□□□ -0.57
NPAS3-204ENST00000546849 SLFNL1Q499Z3 407 aa11.47□□□□□ -0.57
NPAS3-204ENST00000546849 ZNF697Q5TEC3 545 aa11.47□□□□□ -0.57
NPAS3-204ENST00000546849 FOXJ1Q92949 421 aa11.47□□□□□ -0.57
NPAS3-204ENST00000546849 WNT7BP56706 349 aa11.45□□□□□ -0.58
NPAS3-204ENST00000546849 SH3BP2P78314 561 aa11.45□□□□□ -0.58
NPAS3-204ENST00000546849 PPP1R12CQ9BZL4 782 aa11.45□□□□□ -0.58
NPAS3-204ENST00000546849 RFX1P22670 979 aa11.44□□□□□ -0.58
NPAS3-204ENST00000546849 FAM174AQ8TBP5 190 aa11.44□□□□□ -0.58
NPAS3-204ENST00000546849 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-204ENST00000546849 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
NPAS3-204ENST00000546849 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
NPAS3-204ENST00000546849 SH3RF1Q7Z6J0 888 aa11.43□□□□□ -0.58
NPAS3-204ENST00000546849 RNF135Q8IUD6 432 aa11.43□□□□□ -0.58
NPAS3-204ENST00000546849 EHBP1Q8NDI1 1231 aa11.43□□□□□ -0.58
NPAS3-204ENST00000546849 SKIP12755 728 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms