RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 NUTM2GQ5VZR2 741 aa23.64■■□□□ 1.37
R3HDM2-209ENST00000546843 ATAD2Q6PL18 1390 aa23.64■■□□□ 1.37
R3HDM2-209ENST00000546843 TESK2Q96S53 571 aa23.62■■□□□ 1.37
R3HDM2-209ENST00000546843 MARF1Q9Y4F3 1742 aaKnown RBP23.62■■□□□ 1.37
R3HDM2-209ENST00000546843 USP21Q9UK80 565 aa23.61■■□□□ 1.37
R3HDM2-209ENST00000546843 USP6P35125 1406 aa23.6■■□□□ 1.37
R3HDM2-209ENST00000546843 SOCS7O14512 581 aa23.6■■□□□ 1.37
R3HDM2-209ENST00000546843 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
R3HDM2-209ENST00000546843 QTRT2Q9H974 415 aaKnown RBP23.58■■□□□ 1.37
R3HDM2-209ENST00000546843 CRYBG1Q9Y4K1 1723 aa23.57■■□□□ 1.36
R3HDM2-209ENST00000546843 BCL9LQ86UU0 1499 aa23.56■■□□□ 1.36
R3HDM2-209ENST00000546843 RXRBP28702 533 aa23.56■■□□□ 1.36
R3HDM2-209ENST00000546843 ABTB2Q8N961 1025 aa23.56■■□□□ 1.36
R3HDM2-209ENST00000546843 TMC1Q8TDI8 760 aa23.56■■□□□ 1.36
R3HDM2-209ENST00000546843 SLIT2O94813 1529 aa23.55■■□□□ 1.36
R3HDM2-209ENST00000546843 PHRF1Q9P1Y6 1649 aaKnown RBP23.54■■□□□ 1.36
R3HDM2-209ENST00000546843 ATRNO75882 1429 aa23.53■■□□□ 1.36
R3HDM2-209ENST00000546843 CPSF1Q10570 1443 aaKnown RBP23.53■■□□□ 1.36
R3HDM2-209ENST00000546843 SSH2Q76I76 1423 aa23.53■■□□□ 1.36
R3HDM2-209ENST00000546843 CD163L1Q9NR16 1453 aa23.52■■□□□ 1.36
R3HDM2-209ENST00000546843 FAM83GA6ND36 823 aa23.52■■□□□ 1.36
R3HDM2-209ENST00000546843 SLC12A5Q9H2X9 1139 aa23.52■■□□□ 1.36
R3HDM2-209ENST00000546843 TRPC5Q9UL62 973 aaPredicted RBP23.52■■□□□ 1.36
R3HDM2-209ENST00000546843 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
R3HDM2-209ENST00000546843 BRD4O60885 1362 aaPredicted RBP23.52■■□□□ 1.36
R3HDM2-209ENST00000546843 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
R3HDM2-209ENST00000546843 PLCH1Q4KWH8 1693 aa23.51■■□□□ 1.35
R3HDM2-209ENST00000546843 NRKQ7Z2Y5 1582 aa23.5■■□□□ 1.35
R3HDM2-209ENST00000546843 RBM6P78332 1123 aaKnown RBP23.5■■□□□ 1.35
R3HDM2-209ENST00000546843 USP19O94966 1318 aa23.5■■□□□ 1.35
R3HDM2-209ENST00000546843 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
R3HDM2-209ENST00000546843 PIK3C2AO00443 1686 aa23.49■■□□□ 1.35
R3HDM2-209ENST00000546843 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
R3HDM2-209ENST00000546843 TMF1P82094 1093 aa23.49■■□□□ 1.35
R3HDM2-209ENST00000546843 UNC5CLQ8IV45 518 aa23.49■■□□□ 1.35
R3HDM2-209ENST00000546843 ZNF692Q9BU19 519 aaPredicted RBP23.49■■□□□ 1.35
R3HDM2-209ENST00000546843 KIAA0232Q92628 1395 aa23.49■■□□□ 1.35
R3HDM2-209ENST00000546843 RGS12O14924 1447 aa23.49■■□□□ 1.35
R3HDM2-209ENST00000546843 PRDM11Q9NQV5 511 aa23.48■■□□□ 1.35
R3HDM2-209ENST00000546843 NLRP6P59044 892 aa23.47■■□□□ 1.35
R3HDM2-209ENST00000546843 CHRNA2Q15822 529 aa23.47■■□□□ 1.35
R3HDM2-209ENST00000546843 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
R3HDM2-209ENST00000546843 PUS7Q96PZ0 661 aaKnown RBP23.47■■□□□ 1.35
R3HDM2-209ENST00000546843 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
R3HDM2-209ENST00000546843 MON2Q7Z3U7 1717 aa23.47■■□□□ 1.35
R3HDM2-209ENST00000546843 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.47■■□□□ 1.35
R3HDM2-209ENST00000546843 COL14A1Q05707 1796 aaKnown RBP23.45■■□□□ 1.34
R3HDM2-209ENST00000546843 CDK12Q9NYV4 1490 aaPredicted RBP23.45■■□□□ 1.34
R3HDM2-209ENST00000546843 HDGFL2Q7Z4V5 671 aaPredicted RBP23.45■■□□□ 1.34
R3HDM2-209ENST00000546843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.45■■□□□ 1.34
R3HDM2-209ENST00000546843 BTG4Q9NY30 223 aa23.45■■□□□ 1.34
R3HDM2-209ENST00000546843 SLC24A1O60721 1099 aa23.44■■□□□ 1.34
R3HDM2-209ENST00000546843 NWD2Q9ULI1 1742 aa23.44■■□□□ 1.34
R3HDM2-209ENST00000546843 TTC21AQ8NDW8 1320 aa23.43■■□□□ 1.34
R3HDM2-209ENST00000546843 NRAPQ86VF7 1730 aa23.43■■□□□ 1.34
R3HDM2-209ENST00000546843 CCDC9Q9Y3X0 531 aaKnown RBP23.43■■□□□ 1.34
R3HDM2-209ENST00000546843 GCP02774 474 aa23.42■■□□□ 1.34
R3HDM2-209ENST00000546843 HSPA5P11021 654 aaKnown RBP23.42■■□□□ 1.34
R3HDM2-209ENST00000546843 GJD4Q96KN9 370 aaPredicted RBP23.42■■□□□ 1.34
R3HDM2-209ENST00000546843 TERF2IPQ9NYB0 399 aa23.42■■□□□ 1.34
R3HDM2-209ENST00000546843 ZRANB1Q9UGI0 708 aa23.42■■□□□ 1.34
R3HDM2-209ENST00000546843 GLI3P10071 1580 aa23.42■■□□□ 1.34
R3HDM2-209ENST00000546843 SLIT3O75094 1523 aa23.42■■□□□ 1.34
R3HDM2-209ENST00000546843 NINLQ9Y2I6 1382 aa23.41■■□□□ 1.34
R3HDM2-209ENST00000546843 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
R3HDM2-209ENST00000546843 EIF4G2P78344 907 aaKnown RBP eCLIP23.41■■□□□ 1.34
R3HDM2-209ENST00000546843 NME9Q86XW9 330 aa23.41■■□□□ 1.34
R3HDM2-209ENST00000546843 EDC4Q6P2E9 1401 aaKnown RBP23.41■■□□□ 1.34
R3HDM2-209ENST00000546843 SOX12O15370 315 aa23.4■■□□□ 1.34
R3HDM2-209ENST00000546843 VPS72Q15906 364 aa23.4■■□□□ 1.34
R3HDM2-209ENST00000546843 CPDO75976 1380 aa23.39■■□□□ 1.33
R3HDM2-209ENST00000546843 CDCA8Q53HL2 280 aa23.37■■□□□ 1.33
R3HDM2-209ENST00000546843 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
R3HDM2-209ENST00000546843 ANKRD36BQ8N2N9 1353 aa23.37■■□□□ 1.33
R3HDM2-209ENST00000546843 STRN4Q9NRL3 753 aa23.36■■□□□ 1.33
R3HDM2-209ENST00000546843 LMO7Q8WWI1 1683 aa23.34■■□□□ 1.33
R3HDM2-209ENST00000546843 CAMTA1Q9Y6Y1 1673 aa23.34■■□□□ 1.33
R3HDM2-209ENST00000546843 MYOM1P52179 1685 aa23.33■■□□□ 1.33
R3HDM2-209ENST00000546843 USP31Q70CQ4 1352 aa23.33■■□□□ 1.33
R3HDM2-209ENST00000546843 NFAT5O94916 1531 aa23.33■■□□□ 1.32
R3HDM2-209ENST00000546843 KCNH5Q8NCM2 988 aa23.31■■□□□ 1.32
R3HDM2-209ENST00000546843 OVOS2A0A0J9YW53 1432 aa23.3■■□□□ 1.32
R3HDM2-209ENST00000546843 OVOS2Q6IE36 1432 aa23.3■■□□□ 1.32
R3HDM2-209ENST00000546843 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
R3HDM2-209ENST00000546843 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
R3HDM2-209ENST00000546843 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
R3HDM2-209ENST00000546843 A0A0G2JS52 829 aa23.29■■□□□ 1.32
R3HDM2-209ENST00000546843 EVA1CP58658 441 aa23.29■■□□□ 1.32
R3HDM2-209ENST00000546843 MYT1Q01538 1121 aa23.29■■□□□ 1.32
R3HDM2-209ENST00000546843 FAM98CQ17RN3 349 aaKnown RBP23.29■■□□□ 1.32
R3HDM2-209ENST00000546843 AATKQ6ZMQ8 1374 aa23.28■■□□□ 1.32
R3HDM2-209ENST00000546843 LARP1Q6PKG0 1096 aaKnown RBP23.28■■□□□ 1.32
R3HDM2-209ENST00000546843 ARHGEF25Q86VW2 580 aa23.28■■□□□ 1.32
R3HDM2-209ENST00000546843 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
R3HDM2-209ENST00000546843 COL5A2P05997 1499 aaPredicted RBP23.28■■□□□ 1.32
R3HDM2-209ENST00000546843 USP35Q9P2H5 1018 aa23.27■■□□□ 1.32
R3HDM2-209ENST00000546843 AXIN2Q9Y2T1 843 aa23.25■■□□□ 1.31
R3HDM2-209ENST00000546843 SPATA31A1Q5TZJ5 1347 aa23.25■■□□□ 1.31
R3HDM2-209ENST00000546843 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
R3HDM2-209ENST00000546843 C11orf95C9JLR9 678 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms