RNA–Protein interactions for RNA: ENST00000546769.1

PKP2-205, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-205ENST00000546769 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
PKP2-205ENST00000546769 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
PKP2-205ENST00000546769 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
PKP2-205ENST00000546769 PLEKHH2Q8IVE3 1493 aa11.81□□□□□ -0.52
PKP2-205ENST00000546769 SETD1AO15047 1707 aaKnown RBP11.8□□□□□ -0.52
PKP2-205ENST00000546769 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
PKP2-205ENST00000546769 GGT6Q6P531 493 aa11.8□□□□□ -0.52
PKP2-205ENST00000546769 THEMISQ8N1K5 641 aaPredicted RBP11.8□□□□□ -0.52
PKP2-205ENST00000546769 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
PKP2-205ENST00000546769 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
PKP2-205ENST00000546769 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
PKP2-205ENST00000546769 HCSTQ9UBK5 93 aa11.79□□□□□ -0.52
PKP2-205ENST00000546769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
PKP2-205ENST00000546769 FAM135BQ49AJ0 1406 aa11.78□□□□□ -0.52
PKP2-205ENST00000546769 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
PKP2-205ENST00000546769 XIRP1Q702N8 1843 aaKnown RBP11.78□□□□□ -0.52
PKP2-205ENST00000546769 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
PKP2-205ENST00000546769 KDM5DQ9BY66 1539 aa11.77□□□□□ -0.52
PKP2-205ENST00000546769 MLLT3P42568 568 aaPredicted RBP11.77□□□□□ -0.53
PKP2-205ENST00000546769 CDHR5Q9HBB8 845 aa11.77□□□□□ -0.53
PKP2-205ENST00000546769 MIA2Q96PC5 1412 aa11.76□□□□□ -0.53
PKP2-205ENST00000546769 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
PKP2-205ENST00000546769 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
PKP2-205ENST00000546769 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
PKP2-205ENST00000546769 WNT2BQ93097 391 aa11.74□□□□□ -0.53
PKP2-205ENST00000546769 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
PKP2-205ENST00000546769 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
PKP2-205ENST00000546769 RTEL1-TNFRSF6BF6WH68 1400 aa11.73□□□□□ -0.53
PKP2-205ENST00000546769 HNRNPMP52272 730 aaKnown RBP eCLIP11.73□□□□□ -0.53
PKP2-205ENST00000546769 THSD4Q6ZMP0 1018 aa11.73□□□□□ -0.53
PKP2-205ENST00000546769 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
PKP2-205ENST00000546769 DHX29Q7Z478 1369 aaKnown RBP11.72□□□□□ -0.53
PKP2-205ENST00000546769 PRSS12P56730 875 aa11.72□□□□□ -0.53
PKP2-205ENST00000546769 FBXO31Q5XUX0 539 aaPredicted RBP11.72□□□□□ -0.53
PKP2-205ENST00000546769 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
PKP2-205ENST00000546769 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
PKP2-205ENST00000546769 SEPT9Q9UHD8 586 aaPredicted RBP11.71□□□□□ -0.53
PKP2-205ENST00000546769 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.53
PKP2-205ENST00000546769 ROBO1Q9Y6N7 1651 aa11.71□□□□□ -0.54
PKP2-205ENST00000546769 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
PKP2-205ENST00000546769 SRCAPQ6ZRS2 3230 aa11.69□□□□□ -0.54
PKP2-205ENST00000546769 SEMA3EO15041 775 aa11.69□□□□□ -0.54
PKP2-205ENST00000546769 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
PKP2-205ENST00000546769 PTPN5P54829 565 aa11.68□□□□□ -0.54
PKP2-205ENST00000546769 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
PKP2-205ENST00000546769 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
PKP2-205ENST00000546769 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
PKP2-205ENST00000546769 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
PKP2-205ENST00000546769 SCAF11Q99590 1463 aaKnown RBP11.68□□□□□ -0.54
PKP2-205ENST00000546769 WASHC2CQ9Y4E1 1318 aa11.67□□□□□ -0.54
PKP2-205ENST00000546769 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
PKP2-205ENST00000546769 ANKK1Q8NFD2 765 aa11.67□□□□□ -0.54
PKP2-205ENST00000546769 FYCO1Q9BQS8 1478 aa11.67□□□□□ -0.54
PKP2-205ENST00000546769 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
PKP2-205ENST00000546769 SLIT1O75093 1534 aa11.66□□□□□ -0.54
PKP2-205ENST00000546769 CFDP1Q9UEE9 299 aaPredicted RBP11.66□□□□□ -0.54
PKP2-205ENST00000546769 JCADQ9P266 1359 aa11.66□□□□□ -0.54
PKP2-205ENST00000546769 CDK12Q9NYV4 1490 aaPredicted RBP11.65□□□□□ -0.54
PKP2-205ENST00000546769 ARHGAP23Q9P227 1491 aa11.65□□□□□ -0.54
PKP2-205ENST00000546769 PHLPP1O60346 1717 aa11.65□□□□□ -0.54
PKP2-205ENST00000546769 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
PKP2-205ENST00000546769 KIF3BO15066 747 aa11.64□□□□□ -0.55
PKP2-205ENST00000546769 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
PKP2-205ENST00000546769 CCNB3Q8WWL7 1395 aa11.64□□□□□ -0.55
PKP2-205ENST00000546769 SOWAHBA6NEL2 793 aa11.63□□□□□ -0.55
PKP2-205ENST00000546769 UBTFP17480 764 aaKnown RBP11.63□□□□□ -0.55
PKP2-205ENST00000546769 BCAMP50895 628 aa11.63□□□□□ -0.55
PKP2-205ENST00000546769 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
PKP2-205ENST00000546769 TTC13Q8NBP0 860 aa11.63□□□□□ -0.55
PKP2-205ENST00000546769 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
PKP2-205ENST00000546769 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
PKP2-205ENST00000546769 ERVK-7P63135 1459 aa11.62□□□□□ -0.55
PKP2-205ENST00000546769 FGD6Q6ZV73 1430 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 SMAPO00193 183 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 TATDN2Q93075 761 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 PLA2G2EQ9NZK7 142 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 CAMSAP2Q08AD1 1489 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
PKP2-205ENST00000546769 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
PKP2-205ENST00000546769 ABCC3O15438 1527 aa11.6□□□□□ -0.55
PKP2-205ENST00000546769 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
PKP2-205ENST00000546769 PTGDRQ13258 359 aa11.6□□□□□ -0.55
PKP2-205ENST00000546769 PNMA3Q9UL41 463 aa11.6□□□□□ -0.55
PKP2-205ENST00000546769 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
PKP2-205ENST00000546769 TIAM1Q13009 1591 aa11.59□□□□□ -0.55
PKP2-205ENST00000546769 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
PKP2-205ENST00000546769 PRDM15P57071 1507 aaPredicted RBP11.59□□□□□ -0.55
PKP2-205ENST00000546769 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
PKP2-205ENST00000546769 NWD1Q149M9 1564 aa11.58□□□□□ -0.55
PKP2-205ENST00000546769 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
PKP2-205ENST00000546769 LRP6O75581 1613 aa11.58□□□□□ -0.56
PKP2-205ENST00000546769 RSPH4AQ5TD94 716 aa11.58□□□□□ -0.56
PKP2-205ENST00000546769 EIF2AK4Q9P2K8 1649 aaKnown RBP11.57□□□□□ -0.56
PKP2-205ENST00000546769 LTKP29376 864 aa11.57□□□□□ -0.56
PKP2-205ENST00000546769 NUDT18Q6ZVK8 323 aa11.57□□□□□ -0.56
PKP2-205ENST00000546769 TXNDC2Q86VQ3 553 aa11.57□□□□□ -0.56
PKP2-205ENST00000546769 KCNA6P17658 529 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms