RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 CARD11Q9BXL7 1154 aa21.85■■□□□ 1.09
SSH1-204ENST00000546697 QTRT2Q9H974 415 aaKnown RBP21.85■■□□□ 1.09
SSH1-204ENST00000546697 USP21Q9UK80 565 aa21.85■■□□□ 1.09
SSH1-204ENST00000546697 SSH2Q76I76 1423 aa21.85■■□□□ 1.09
SSH1-204ENST00000546697 TRPC5Q9UL62 973 aaPredicted RBP21.84■■□□□ 1.09
SSH1-204ENST00000546697 SRPK2P78362 688 aaKnown RBP21.83■■□□□ 1.09
SSH1-204ENST00000546697 PUS7Q96PZ0 661 aaKnown RBP21.83■■□□□ 1.09
SSH1-204ENST00000546697 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
SSH1-204ENST00000546697 ATAD2Q6PL18 1390 aa21.82■■□□□ 1.08
SSH1-204ENST00000546697 USP6P35125 1406 aa21.8■■□□□ 1.08
SSH1-204ENST00000546697 CABLES1Q8TDN4 633 aa21.8■■□□□ 1.08
SSH1-204ENST00000546697 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
SSH1-204ENST00000546697 RGS12O14924 1447 aa21.8■■□□□ 1.08
SSH1-204ENST00000546697 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
SSH1-204ENST00000546697 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
SSH1-204ENST00000546697 UNC5CLQ8IV45 518 aa21.79■■□□□ 1.08
SSH1-204ENST00000546697 PHRF1Q9P1Y6 1649 aaKnown RBP21.79■■□□□ 1.08
SSH1-204ENST00000546697 USP19O94966 1318 aa21.79■■□□□ 1.08
SSH1-204ENST00000546697 CABP1Q9NZU7 370 aa21.78■■□□□ 1.08
SSH1-204ENST00000546697 COL14A1Q05707 1796 aaKnown RBP21.78■■□□□ 1.08
SSH1-204ENST00000546697 SLC24A1O60721 1099 aa21.77■■□□□ 1.08
SSH1-204ENST00000546697 TESK2Q96S53 571 aa21.77■■□□□ 1.08
SSH1-204ENST00000546697 NRAPQ86VF7 1730 aa21.76■■□□□ 1.07
SSH1-204ENST00000546697 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
SSH1-204ENST00000546697 GLI3P10071 1580 aa21.75■■□□□ 1.07
SSH1-204ENST00000546697 FAM83GA6ND36 823 aa21.75■■□□□ 1.07
SSH1-204ENST00000546697 LMOD2Q6P5Q4 547 aa21.75■■□□□ 1.07
SSH1-204ENST00000546697 ZNF692Q9BU19 519 aaPredicted RBP21.75■■□□□ 1.07
SSH1-204ENST00000546697 NRKQ7Z2Y5 1582 aa21.74■■□□□ 1.07
SSH1-204ENST00000546697 GJD4Q96KN9 370 aaPredicted RBP21.74■■□□□ 1.07
SSH1-204ENST00000546697 CPDO75976 1380 aa21.74■■□□□ 1.07
SSH1-204ENST00000546697 PAK3O75914 559 aaPredicted RBP21.73■■□□□ 1.07
SSH1-204ENST00000546697 VPS72Q15906 364 aa21.73■■□□□ 1.07
SSH1-204ENST00000546697 CD163L1Q9NR16 1453 aa21.72■■□□□ 1.07
SSH1-204ENST00000546697 SLIT3O75094 1523 aa21.72■■□□□ 1.07
SSH1-204ENST00000546697 ONECUT3O60422 494 aaPredicted RBP21.72■■□□□ 1.07
SSH1-204ENST00000546697 HAP1P54257 671 aaPredicted RBP21.71■■□□□ 1.07
SSH1-204ENST00000546697 MON2Q7Z3U7 1717 aa21.71■■□□□ 1.07
SSH1-204ENST00000546697 PIK3C2AO00443 1686 aa21.7■■□□□ 1.06
SSH1-204ENST00000546697 USP54Q70EL1 1684 aa21.69■■□□□ 1.06
SSH1-204ENST00000546697 NLRP13Q86W25 1043 aa21.69■■□□□ 1.06
SSH1-204ENST00000546697 ABTB2Q8N961 1025 aa21.69■■□□□ 1.06
SSH1-204ENST00000546697 NINLQ9Y2I6 1382 aa21.69■■□□□ 1.06
SSH1-204ENST00000546697 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
SSH1-204ENST00000546697 EP400Q96L91 3159 aa21.68■■□□□ 1.06
SSH1-204ENST00000546697 ST20-MTHFSA0A0A6YYL1 179 aa21.68■■□□□ 1.06
SSH1-204ENST00000546697 TTC21AQ8NDW8 1320 aa21.68■■□□□ 1.06
SSH1-204ENST00000546697 KIAA0232Q92628 1395 aa21.67■■□□□ 1.06
SSH1-204ENST00000546697 USP47Q96K76 1375 aa21.67■■□□□ 1.06
SSH1-204ENST00000546697 TTC21BQ7Z4L5 1316 aa21.66■■□□□ 1.06
SSH1-204ENST00000546697 UPF1Q92900 1129 aaKnown RBP eCLIP21.65■■□□□ 1.06
SSH1-204ENST00000546697 USP31Q70CQ4 1352 aa21.64■■□□□ 1.06
SSH1-204ENST00000546697 GCP02774 474 aa21.64■■□□□ 1.05
SSH1-204ENST00000546697 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.05
SSH1-204ENST00000546697 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
SSH1-204ENST00000546697 KTN1Q86UP2 1357 aaKnown RBP21.62■■□□□ 1.05
SSH1-204ENST00000546697 EDC4Q6P2E9 1401 aaKnown RBP21.61■■□□□ 1.05
SSH1-204ENST00000546697 SPATA31A5Q5VU36 1347 aa21.6■■□□□ 1.05
SSH1-204ENST00000546697 SPATA31A7Q8IWB4 1347 aa21.6■■□□□ 1.05
SSH1-204ENST00000546697 CAMTA1Q9Y6Y1 1673 aa21.6■■□□□ 1.05
SSH1-204ENST00000546697 NUTM2GQ5VZR2 741 aa21.6■■□□□ 1.05
SSH1-204ENST00000546697 AATKQ6ZMQ8 1374 aa21.6■■□□□ 1.05
SSH1-204ENST00000546697 ABCC6O95255 1503 aa21.6■■□□□ 1.05
SSH1-204ENST00000546697 NLRP6P59044 892 aa21.59■■□□□ 1.05
SSH1-204ENST00000546697 THSD7AQ9UPZ6 1657 aa21.59■■□□□ 1.05
SSH1-204ENST00000546697 NFAT5O94916 1531 aa21.59■■□□□ 1.05
SSH1-204ENST00000546697 COL18A1P39060 1754 aa21.59■■□□□ 1.05
SSH1-204ENST00000546697 SLC12A5Q9H2X9 1139 aa21.58■■□□□ 1.05
SSH1-204ENST00000546697 A0A1W2PP64 1363 aa21.58■■□□□ 1.04
SSH1-204ENST00000546697 ZC3H6P61129 1189 aaKnown RBP21.57■■□□□ 1.04
SSH1-204ENST00000546697 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
SSH1-204ENST00000546697 PLEKHG5O94827 1062 aa21.56■■□□□ 1.04
SSH1-204ENST00000546697 KCNH5Q8NCM2 988 aa21.56■■□□□ 1.04
SSH1-204ENST00000546697 TERF2IPQ9NYB0 399 aa21.56■■□□□ 1.04
SSH1-204ENST00000546697 SPATA31A1Q5TZJ5 1347 aa21.55■■□□□ 1.04
SSH1-204ENST00000546697 TMF1P82094 1093 aa21.55■■□□□ 1.04
SSH1-204ENST00000546697 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
SSH1-204ENST00000546697 COL5A2P05997 1499 aaPredicted RBP21.55■■□□□ 1.04
SSH1-204ENST00000546697 BRWD3Q6RI45 1802 aa21.55■■□□□ 1.04
SSH1-204ENST00000546697 ANKRD36BQ8N2N9 1353 aa21.54■■□□□ 1.04
SSH1-204ENST00000546697 CHRNA2Q15822 529 aa21.54■■□□□ 1.04
SSH1-204ENST00000546697 ARHGEF25Q86VW2 580 aa21.54■■□□□ 1.04
SSH1-204ENST00000546697 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
SSH1-204ENST00000546697 OVOS2A0A0J9YW53 1432 aa21.54■■□□□ 1.04
SSH1-204ENST00000546697 OVOS2Q6IE36 1432 aa21.54■■□□□ 1.04
SSH1-204ENST00000546697 CDCA8Q53HL2 280 aa21.53■■□□□ 1.04
SSH1-204ENST00000546697 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
SSH1-204ENST00000546697 CCDC125Q86Z20 511 aa21.51■■□□□ 1.03
SSH1-204ENST00000546697 TMC1Q8TDI8 760 aa21.5■■□□□ 1.03
SSH1-204ENST00000546697 THRAP3Q9Y2W1 955 aaKnown RBP21.49■■□□□ 1.03
SSH1-204ENST00000546697 MYOM1P52179 1685 aa21.48■■□□□ 1.03
SSH1-204ENST00000546697 CRB1P82279 1406 aa21.47■■□□□ 1.03
SSH1-204ENST00000546697 FAM98CQ17RN3 349 aaKnown RBP21.47■■□□□ 1.03
SSH1-204ENST00000546697 CCDC9Q9Y3X0 531 aaKnown RBP21.47■■□□□ 1.03
SSH1-204ENST00000546697 KRT27Q7Z3Y8 459 aa21.46■■□□□ 1.03
SSH1-204ENST00000546697 NME9Q86XW9 330 aa21.46■■□□□ 1.03
SSH1-204ENST00000546697 LARP1Q6PKG0 1096 aaKnown RBP21.45■■□□□ 1.02
SSH1-204ENST00000546697 AXIN2Q9Y2T1 843 aa21.45■■□□□ 1.02
SSH1-204ENST00000546697 BLMP54132 1417 aaPredicted RBP21.45■■□□□ 1.02
SSH1-204ENST00000546697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms