RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 CDK19Q9BWU1 502 aa27.16■■□□□ 1.94
CHERP-204ENST00000546538 SEPT12Q8IYM1 358 aa27.15■■□□□ 1.94
CHERP-204ENST00000546538 COL14A1Q05707 1796 aaKnown RBP27.14■■□□□ 1.94
CHERP-204ENST00000546538 BTG4Q9NY30 223 aa27.12■■□□□ 1.93
CHERP-204ENST00000546538 POLR3AO14802 1390 aaPredicted RBP27.11■■□□□ 1.93
CHERP-204ENST00000546538 PAK3O75914 559 aaPredicted RBP27.1■■□□□ 1.93
CHERP-204ENST00000546538 PHRF1Q9P1Y6 1649 aaKnown RBP27.09■■□□□ 1.93
CHERP-204ENST00000546538 CCDC9Q9Y3X0 531 aaKnown RBP27.08■■□□□ 1.93
CHERP-204ENST00000546538 CCDC125Q86Z20 511 aa27.07■■□□□ 1.92
CHERP-204ENST00000546538 ACEP12821 1306 aa27.07■■□□□ 1.92
CHERP-204ENST00000546538 BLMP54132 1417 aaPredicted RBP27.07■■□□□ 1.92
CHERP-204ENST00000546538 L3MBTL2Q969R5 705 aa27.07■■□□□ 1.92
CHERP-204ENST00000546538 CCDC61Q9Y6R9 512 aa27.06■■□□□ 1.92
CHERP-204ENST00000546538 PLEKHG3A1L390 1219 aa27.05■■□□□ 1.92
CHERP-204ENST00000546538 NBPF8Q3BBV2 869 aa27.05■■□□□ 1.92
CHERP-204ENST00000546538 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
CHERP-204ENST00000546538 KIAA0232Q92628 1395 aa27.04■■□□□ 1.92
CHERP-204ENST00000546538 FAM98CQ17RN3 349 aaKnown RBP27.03■■□□□ 1.92
CHERP-204ENST00000546538 NUTM2GQ5VZR2 741 aa27.03■■□□□ 1.92
CHERP-204ENST00000546538 QRICH2Q9H0J4 1663 aa27.02■■□□□ 1.92
CHERP-204ENST00000546538 KRT27Q7Z3Y8 459 aa27.02■■□□□ 1.92
CHERP-204ENST00000546538 SPATA31A5Q5VU36 1347 aa27.02■■□□□ 1.92
CHERP-204ENST00000546538 SPATA31A7Q8IWB4 1347 aa27.02■■□□□ 1.92
CHERP-204ENST00000546538 CENPJQ9HC77 1338 aaPredicted RBP27.02■■□□□ 1.92
CHERP-204ENST00000546538 DEFB132Q7Z7B7 95 aa27.01■■□□□ 1.91
CHERP-204ENST00000546538 PRDM11Q9NQV5 511 aa27.01■■□□□ 1.91
CHERP-204ENST00000546538 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.91
CHERP-204ENST00000546538 NRKQ7Z2Y5 1582 aa27■■□□□ 1.91
CHERP-204ENST00000546538 TRPM1Q7Z4N2 1603 aa27■■□□□ 1.91
CHERP-204ENST00000546538 CHRNA2Q15822 529 aa26.99■■□□□ 1.91
CHERP-204ENST00000546538 CABP2Q9NPB3 220 aa26.99■■□□□ 1.91
CHERP-204ENST00000546538 PPIP5K1Q6PFW1 1433 aa26.99■■□□□ 1.91
CHERP-204ENST00000546538 ZC3H6P61129 1189 aaKnown RBP26.97■■□□□ 1.91
CHERP-204ENST00000546538 ZRANB1Q9UGI0 708 aa26.96■■□□□ 1.91
CHERP-204ENST00000546538 SRPK2P78362 688 aaKnown RBP26.95■■□□□ 1.9
CHERP-204ENST00000546538 USP19O94966 1318 aa26.95■■□□□ 1.9
CHERP-204ENST00000546538 A0A0G2JS52 829 aa26.93■■□□□ 1.9
CHERP-204ENST00000546538 MYT1Q01538 1121 aa26.93■■□□□ 1.9
CHERP-204ENST00000546538 FAM182BQ5T319 152 aa26.93■■□□□ 1.9
CHERP-204ENST00000546538 SPATA31A1Q5TZJ5 1347 aa26.93■■□□□ 1.9
CHERP-204ENST00000546538 LMO7Q8WWI1 1683 aa26.93■■□□□ 1.9
CHERP-204ENST00000546538 CAMTA1Q9Y6Y1 1673 aa26.92■■□□□ 1.9
CHERP-204ENST00000546538 ABTB2Q8N961 1025 aa26.91■■□□□ 1.9
CHERP-204ENST00000546538 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
CHERP-204ENST00000546538 CPDO75976 1380 aa26.89■■□□□ 1.9
CHERP-204ENST00000546538 STRN4Q9NRL3 753 aa26.89■■□□□ 1.89
CHERP-204ENST00000546538 CABP1Q9NZU7 370 aa26.89■■□□□ 1.89
CHERP-204ENST00000546538 USP6P35125 1406 aa26.88■■□□□ 1.89
CHERP-204ENST00000546538 SSH2Q76I76 1423 aa26.88■■□□□ 1.89
CHERP-204ENST00000546538 TNS1Q9HBL0 1735 aaKnown RBP26.84■■□□□ 1.89
CHERP-204ENST00000546538 SF3B2Q13435 895 aaKnown RBP26.84■■□□□ 1.89
CHERP-204ENST00000546538 PIK3C2AO00443 1686 aa26.84■■□□□ 1.89
CHERP-204ENST00000546538 ROCK2O75116 1388 aaKnown RBP26.84■■□□□ 1.89
CHERP-204ENST00000546538 GCP02774 474 aa26.83■■□□□ 1.89
CHERP-204ENST00000546538 LARP1Q6PKG0 1096 aaKnown RBP26.83■■□□□ 1.89
CHERP-204ENST00000546538 RGPD1P0DJD0 1748 aa26.83■■□□□ 1.89
CHERP-204ENST00000546538 SLIT3O75094 1523 aa26.83■■□□□ 1.88
CHERP-204ENST00000546538 BRD4O60885 1362 aaPredicted RBP26.82■■□□□ 1.88
CHERP-204ENST00000546538 NLRP13Q86W25 1043 aa26.82■■□□□ 1.88
CHERP-204ENST00000546538 USP35Q9P2H5 1018 aa26.81■■□□□ 1.88
CHERP-204ENST00000546538 COL5A2P05997 1499 aaPredicted RBP26.8■■□□□ 1.88
CHERP-204ENST00000546538 EVC2Q86UK5 1308 aa26.79■■□□□ 1.88
CHERP-204ENST00000546538 AKAP12Q02952 1782 aa26.78■■□□□ 1.88
CHERP-204ENST00000546538 EN1Q05925 392 aaPredicted RBP26.78■■□□□ 1.88
CHERP-204ENST00000546538 BARGINQ6ZT62 677 aa26.78■■□□□ 1.88
CHERP-204ENST00000546538 DISP2A7MBM2 1401 aa26.77■■□□□ 1.88
CHERP-204ENST00000546538 BAG6P46379 1132 aa26.77■■□□□ 1.88
CHERP-204ENST00000546538 COL18A1P39060 1754 aa26.77■■□□□ 1.88
CHERP-204ENST00000546538 EVA1CP58658 441 aa26.76■■□□□ 1.87
CHERP-204ENST00000546538 NLRP6P59044 892 aa26.75■■□□□ 1.87
CHERP-204ENST00000546538 CPSF1Q10570 1443 aaKnown RBP26.74■■□□□ 1.87
CHERP-204ENST00000546538 TCP11L2Q8N4U5 519 aa26.73■■□□□ 1.87
CHERP-204ENST00000546538 TTC21BQ7Z4L5 1316 aa26.72■■□□□ 1.87
CHERP-204ENST00000546538 AATKQ6ZMQ8 1374 aa26.72■■□□□ 1.87
CHERP-204ENST00000546538 PSDA5PKW4 1024 aaPredicted RBP26.71■■□□□ 1.87
CHERP-204ENST00000546538 TRIM37O94972 964 aa26.71■■□□□ 1.87
CHERP-204ENST00000546538 PARP4Q9UKK3 1724 aaKnown RBP26.7■■□□□ 1.87
CHERP-204ENST00000546538 FAM196AQ6ZSG2 479 aa26.7■■□□□ 1.86
CHERP-204ENST00000546538 CRB1P82279 1406 aa26.69■■□□□ 1.86
CHERP-204ENST00000546538 SBNO2Q9Y2G9 1366 aa26.69■■□□□ 1.86
CHERP-204ENST00000546538 AXIN2Q9Y2T1 843 aa26.69■■□□□ 1.86
CHERP-204ENST00000546538 ZBTB7CA1YPR0 619 aa26.68■■□□□ 1.86
CHERP-204ENST00000546538 EZH2Q15910 746 aaKnown RBP26.68■■□□□ 1.86
CHERP-204ENST00000546538 MON2Q7Z3U7 1717 aa26.68■■□□□ 1.86
CHERP-204ENST00000546538 LRP5O75197 1615 aa26.68■■□□□ 1.86
CHERP-204ENST00000546538 CD163L1Q9NR16 1453 aa26.68■■□□□ 1.86
CHERP-204ENST00000546538 CAMKK2Q96RR4 588 aa26.67■■□□□ 1.86
CHERP-204ENST00000546538 THRAP3Q9Y2W1 955 aaKnown RBP26.66■■□□□ 1.86
CHERP-204ENST00000546538 NFAT5O94916 1531 aa26.66■■□□□ 1.86
CHERP-204ENST00000546538 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
CHERP-204ENST00000546538 PEAK1Q9H792 1746 aa26.65■■□□□ 1.86
CHERP-204ENST00000546538 LRRC37A3O60309 1634 aa26.65■■□□□ 1.86
CHERP-204ENST00000546538 RGPD5Q99666 1765 aa26.65■■□□□ 1.86
CHERP-204ENST00000546538 ARHGEF25Q86VW2 580 aa26.65■■□□□ 1.86
CHERP-204ENST00000546538 PDE3BQ13370 1112 aa26.64■■□□□ 1.85
CHERP-204ENST00000546538 CARD11Q9BXL7 1154 aa26.64■■□□□ 1.85
CHERP-204ENST00000546538 KTN1Q86UP2 1357 aaKnown RBP26.62■■□□□ 1.85
CHERP-204ENST00000546538 TTC21AQ8NDW8 1320 aa26.62■■□□□ 1.85
CHERP-204ENST00000546538 WNK3Q9BYP7 1800 aa26.62■■□□□ 1.85
CHERP-204ENST00000546538 RREB1Q92766 1687 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 309.7 ms