RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-223ENST00000546312 ROBO1Q9Y6N7 1651 aa12.41□□□□□ -0.42
SLC3A2-223ENST00000546312 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.42
SLC3A2-223ENST00000546312 TMF1P82094 1093 aa12.4□□□□□ -0.42
SLC3A2-223ENST00000546312 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
SLC3A2-223ENST00000546312 BRD4O60885 1362 aaPredicted RBP12.4□□□□□ -0.42
SLC3A2-223ENST00000546312 INSRP06213 1382 aa12.4□□□□□ -0.42
SLC3A2-223ENST00000546312 ANKARQ7Z5J8 1434 aa12.39□□□□□ -0.43
SLC3A2-223ENST00000546312 ST20-MTHFSA0A0A6YYL1 179 aa12.39□□□□□ -0.43
SLC3A2-223ENST00000546312 NUTM2FA1L443 756 aa12.39□□□□□ -0.43
SLC3A2-223ENST00000546312 BRINP3Q76B58 766 aa12.39□□□□□ -0.43
SLC3A2-223ENST00000546312 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
SLC3A2-223ENST00000546312 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
SLC3A2-223ENST00000546312 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
SLC3A2-223ENST00000546312 SRPK2P78362 688 aaKnown RBP12.38□□□□□ -0.43
SLC3A2-223ENST00000546312 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
SLC3A2-223ENST00000546312 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
SLC3A2-223ENST00000546312 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
SLC3A2-223ENST00000546312 SBNO2Q9Y2G9 1366 aa12.38□□□□□ -0.43
SLC3A2-223ENST00000546312 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 PHLPP1O60346 1717 aa12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 IFNLR1Q8IU57 520 aaPredicted RBP12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 TULP4Q9NRJ4 1543 aa12.37□□□□□ -0.43
SLC3A2-223ENST00000546312 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
SLC3A2-223ENST00000546312 HSPA1LP34931 641 aa12.35□□□□□ -0.43
SLC3A2-223ENST00000546312 PSME1Q06323 249 aa12.35□□□□□ -0.43
SLC3A2-223ENST00000546312 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
SLC3A2-223ENST00000546312 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
SLC3A2-223ENST00000546312 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
SLC3A2-223ENST00000546312 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
SLC3A2-223ENST00000546312 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
SLC3A2-223ENST00000546312 TESK2Q96S53 571 aa12.34□□□□□ -0.43
SLC3A2-223ENST00000546312 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
SLC3A2-223ENST00000546312 NHSL1Q5SYE7 1610 aa12.33□□□□□ -0.43
SLC3A2-223ENST00000546312 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.43
SLC3A2-223ENST00000546312 USP32Q8NFA0 1604 aa12.33□□□□□ -0.43
SLC3A2-223ENST00000546312 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
SLC3A2-223ENST00000546312 FOXO3O43524 673 aa12.33□□□□□ -0.44
SLC3A2-223ENST00000546312 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
SLC3A2-223ENST00000546312 NGDNQ8NEJ9 315 aaKnown RBP12.33□□□□□ -0.44
SLC3A2-223ENST00000546312 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
SLC3A2-223ENST00000546312 KRT28Q7Z3Y7 464 aa12.32□□□□□ -0.44
SLC3A2-223ENST00000546312 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
SLC3A2-223ENST00000546312 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
SLC3A2-223ENST00000546312 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
SLC3A2-223ENST00000546312 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
SLC3A2-223ENST00000546312 PNISRQ8TF01 805 aaKnown RBP12.31□□□□□ -0.44
SLC3A2-223ENST00000546312 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
SLC3A2-223ENST00000546312 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
SLC3A2-223ENST00000546312 SMG6Q86US8 1419 aaKnown RBP12.3□□□□□ -0.44
SLC3A2-223ENST00000546312 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
SLC3A2-223ENST00000546312 CABP1Q9NZU7 370 aa12.3□□□□□ -0.44
SLC3A2-223ENST00000546312 PPIP5K1Q6PFW1 1433 aa12.29□□□□□ -0.44
SLC3A2-223ENST00000546312 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
SLC3A2-223ENST00000546312 ATP7BP35670 1465 aa12.29□□□□□ -0.44
SLC3A2-223ENST00000546312 DDX17Q92841 729 aaKnown RBP12.29□□□□□ -0.44
SLC3A2-223ENST00000546312 ACEP12821 1306 aa12.29□□□□□ -0.44
SLC3A2-223ENST00000546312 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
SLC3A2-223ENST00000546312 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
SLC3A2-223ENST00000546312 JCADQ9P266 1359 aa12.28□□□□□ -0.44
SLC3A2-223ENST00000546312 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
SLC3A2-223ENST00000546312 NUDCQ9Y266 331 aa12.27□□□□□ -0.45
SLC3A2-223ENST00000546312 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
SLC3A2-223ENST00000546312 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
SLC3A2-223ENST00000546312 PARD3Q8TEW0 1356 aa12.27□□□□□ -0.45
SLC3A2-223ENST00000546312 NINLQ9Y2I6 1382 aa12.27□□□□□ -0.45
SLC3A2-223ENST00000546312 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
SLC3A2-223ENST00000546312 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
SLC3A2-223ENST00000546312 NPC1L1Q9UHC9 1359 aa12.26□□□□□ -0.45
SLC3A2-223ENST00000546312 PXDNQ92626 1479 aa12.26□□□□□ -0.45
SLC3A2-223ENST00000546312 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
SLC3A2-223ENST00000546312 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
SLC3A2-223ENST00000546312 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
SLC3A2-223ENST00000546312 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
SLC3A2-223ENST00000546312 XPCQ01831 940 aaPredicted RBP12.25□□□□□ -0.45
SLC3A2-223ENST00000546312 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
SLC3A2-223ENST00000546312 SPATA31A6Q5VVP1 1343 aa12.25□□□□□ -0.45
SLC3A2-223ENST00000546312 SPATA31A3Q5VYP0 1347 aa12.25□□□□□ -0.45
SLC3A2-223ENST00000546312 SLC12A5Q9H2X9 1139 aa12.24□□□□□ -0.45
SLC3A2-223ENST00000546312 DISP3Q9P2K9 1392 aa12.24□□□□□ -0.45
SLC3A2-223ENST00000546312 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
SLC3A2-223ENST00000546312 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
SLC3A2-223ENST00000546312 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
SLC3A2-223ENST00000546312 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
SLC3A2-223ENST00000546312 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
SLC3A2-223ENST00000546312 CPSF1Q10570 1443 aaKnown RBP12.21□□□□□ -0.45
SLC3A2-223ENST00000546312 TNS3Q68CZ2 1445 aa12.21□□□□□ -0.45
SLC3A2-223ENST00000546312 PNPLA6Q8IY17 1366 aa12.21□□□□□ -0.45
SLC3A2-223ENST00000546312 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
SLC3A2-223ENST00000546312 ABTB2Q8N961 1025 aa12.21□□□□□ -0.45
SLC3A2-223ENST00000546312 PANK3Q9H999 370 aa12.21□□□□□ -0.45
SLC3A2-223ENST00000546312 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
SLC3A2-223ENST00000546312 COL22A1Q8NFW1 1626 aaPredicted RBP12.21□□□□□ -0.46
SLC3A2-223ENST00000546312 ALS2Q96Q42 1657 aa12.2□□□□□ -0.46
SLC3A2-223ENST00000546312 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
SLC3A2-223ENST00000546312 TTC21AQ8NDW8 1320 aa12.2□□□□□ -0.46
SLC3A2-223ENST00000546312 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms