RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 POLR3AO14802 1390 aaPredicted RBP9.96□□□□□ -0.82
UBR1-202ENST00000546274 GRPEL1Q9HAV7 217 aa9.95□□□□□ -0.82
UBR1-202ENST00000546274 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.95□□□□□ -0.82
UBR1-202ENST00000546274 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
UBR1-202ENST00000546274 DMTNQ08495 405 aa9.95□□□□□ -0.82
UBR1-202ENST00000546274 NOS1P29475 1434 aa9.95□□□□□ -0.82
UBR1-202ENST00000546274 DIP2CQ9Y2E4 1556 aa9.95□□□□□ -0.82
UBR1-202ENST00000546274 SIGLEC1Q9BZZ2 1709 aa9.95□□□□□ -0.82
UBR1-202ENST00000546274 E9PSI1 815 aa9.94□□□□□ -0.82
UBR1-202ENST00000546274 ARHGEF28Q8N1W1 1705 aaKnown RBP9.94□□□□□ -0.82
UBR1-202ENST00000546274 ZBTB22O15209 634 aa9.94□□□□□ -0.82
UBR1-202ENST00000546274 CDK11BP21127 795 aaKnown RBP9.94□□□□□ -0.82
UBR1-202ENST00000546274 AGLP35573 1532 aa9.93□□□□□ -0.82
UBR1-202ENST00000546274 IGHDP01880 384 aa9.93□□□□□ -0.82
UBR1-202ENST00000546274 ADAMTSL3P82987 1691 aa9.93□□□□□ -0.82
UBR1-202ENST00000546274 NSD3Q9BZ95 1437 aa9.93□□□□□ -0.82
UBR1-202ENST00000546274 BECN1Q14457 450 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 CHMP4AQ9BY43 222 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 UQCRHLA0A096LP55 91 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 TRAK2O60296 914 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 UQCRHP07919 91 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 FTSJ3Q8IY81 847 aaKnown RBP9.92□□□□□ -0.82
UBR1-202ENST00000546274 NPATQ14207 1427 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 YEATS2Q9ULM3 1422 aa9.92□□□□□ -0.82
UBR1-202ENST00000546274 PIK3C2BO00750 1634 aa9.91□□□□□ -0.82
UBR1-202ENST00000546274 ZSCAN20P17040 1043 aaPredicted RBP9.91□□□□□ -0.82
UBR1-202ENST00000546274 NGEFQ8N5V2 710 aa9.91□□□□□ -0.82
UBR1-202ENST00000546274 CAMSAP1Q5T5Y3 1602 aa9.91□□□□□ -0.82
UBR1-202ENST00000546274 OFD1O75665 1012 aa9.91□□□□□ -0.82
UBR1-202ENST00000546274 MSNP26038 577 aaKnown RBP9.91□□□□□ -0.82
UBR1-202ENST00000546274 USP19O94966 1318 aa9.91□□□□□ -0.82
UBR1-202ENST00000546274 UTP14CQ5TAP6 766 aaKnown RBP9.9□□□□□ -0.82
UBR1-202ENST00000546274 NLRP1Q9C000 1473 aa9.9□□□□□ -0.82
UBR1-202ENST00000546274 NINLQ9Y2I6 1382 aa9.9□□□□□ -0.82
UBR1-202ENST00000546274 MCM4P33991 863 aa9.9□□□□□ -0.82
UBR1-202ENST00000546274 DNTTIP2Q5QJE6 756 aaKnown RBP9.9□□□□□ -0.82
UBR1-202ENST00000546274 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.82
UBR1-202ENST00000546274 TULP4Q9NRJ4 1543 aa9.9□□□□□ -0.82
UBR1-202ENST00000546274 ADGRB2O60241 1585 aa9.9□□□□□ -0.82
UBR1-202ENST00000546274 PDE3AQ14432 1141 aa9.9□□□□□ -0.83
UBR1-202ENST00000546274 ZBTB7CA1YPR0 619 aa9.89□□□□□ -0.83
UBR1-202ENST00000546274 CBX1P83916 185 aa9.89□□□□□ -0.83
UBR1-202ENST00000546274 PANK1Q8TE04 598 aa9.89□□□□□ -0.83
UBR1-202ENST00000546274 C14orf93Q9H972 538 aaKnown RBP9.89□□□□□ -0.83
UBR1-202ENST00000546274 CGNL1Q0VF96 1302 aa9.89□□□□□ -0.83
UBR1-202ENST00000546274 ABCC3O15438 1527 aa9.88□□□□□ -0.83
UBR1-202ENST00000546274 IGSF3O75054 1194 aa9.88□□□□□ -0.83
UBR1-202ENST00000546274 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
UBR1-202ENST00000546274 NEXMIFQ5QGS0 1516 aa9.88□□□□□ -0.83
UBR1-202ENST00000546274 CLUAP1Q96AJ1 413 aa9.88□□□□□ -0.83
UBR1-202ENST00000546274 CGNQ9P2M7 1197 aaKnown RBP9.88□□□□□ -0.83
UBR1-202ENST00000546274 FER1L4A9Z1Z3 1794 aa9.88□□□□□ -0.83
UBR1-202ENST00000546274 KDM4FA0A1W2PPD8 638 aa9.87□□□□□ -0.83
UBR1-202ENST00000546274 SECISBP2LQ93073 1101 aaKnown RBP9.87□□□□□ -0.83
UBR1-202ENST00000546274 TRAK1Q9UPV9 953 aa9.87□□□□□ -0.83
UBR1-202ENST00000546274 COG6Q9Y2V7 657 aa9.87□□□□□ -0.83
UBR1-202ENST00000546274 MYO5BQ9ULV0 1848 aa9.87□□□□□ -0.83
UBR1-202ENST00000546274 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
UBR1-202ENST00000546274 ZSCAN30Q86W11 494 aa9.87□□□□□ -0.83
UBR1-202ENST00000546274 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
UBR1-202ENST00000546274 ANKRD26Q9UPS8 1709 aa9.87□□□□□ -0.83
UBR1-202ENST00000546274 SEC24BO95487 1268 aa9.86□□□□□ -0.83
UBR1-202ENST00000546274 XPCQ01831 940 aaPredicted RBP9.86□□□□□ -0.83
UBR1-202ENST00000546274 RUNDC1Q96C34 613 aa9.86□□□□□ -0.83
UBR1-202ENST00000546274 RRP7AQ9Y3A4 280 aaKnown RBP9.86□□□□□ -0.83
UBR1-202ENST00000546274 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
UBR1-202ENST00000546274 TCP11L2Q8N4U5 519 aa9.86□□□□□ -0.83
UBR1-202ENST00000546274 TNNQ9UQP3 1299 aa9.86□□□□□ -0.83
UBR1-202ENST00000546274 RLBP1P12271 317 aa9.85□□□□□ -0.83
UBR1-202ENST00000546274 TMEM132EQ6IEE7 984 aa9.85□□□□□ -0.83
UBR1-202ENST00000546274 MTERF4Q7Z6M4 381 aaKnown RBP9.85□□□□□ -0.83
UBR1-202ENST00000546274 ANTXR1Q9H6X2 564 aa9.85□□□□□ -0.83
UBR1-202ENST00000546274 RIMS1Q86UR5 1692 aaKnown RBP9.85□□□□□ -0.83
UBR1-202ENST00000546274 GAS2L3Q86XJ1 694 aa9.85□□□□□ -0.83
UBR1-202ENST00000546274 CCDC94Q9BW85 323 aaPredicted RBP9.85□□□□□ -0.83
UBR1-202ENST00000546274 KIF20AO95235 890 aa9.84□□□□□ -0.83
UBR1-202ENST00000546274 MTHFSP49914 203 aa9.84□□□□□ -0.83
UBR1-202ENST00000546274 NEUROD2Q15784 382 aa9.84□□□□□ -0.83
UBR1-202ENST00000546274 CCDC27Q2M243 656 aa9.84□□□□□ -0.83
UBR1-202ENST00000546274 WDR63Q8IWG1 891 aa9.84□□□□□ -0.83
UBR1-202ENST00000546274 PCDHB15Q9Y5E8 787 aa9.84□□□□□ -0.83
UBR1-202ENST00000546274 MAPK8IP3Q9UPT6 1336 aa9.83□□□□□ -0.84
UBR1-202ENST00000546274 AEBP1Q8IUX7 1158 aa9.83□□□□□ -0.84
UBR1-202ENST00000546274 ANKRD36BQ8N2N9 1353 aa9.83□□□□□ -0.84
UBR1-202ENST00000546274 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
UBR1-202ENST00000546274 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
UBR1-202ENST00000546274 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
UBR1-202ENST00000546274 PTPRMP28827 1452 aa9.83□□□□□ -0.84
UBR1-202ENST00000546274 CLTCQ00610 1675 aaKnown RBP9.83□□□□□ -0.84
UBR1-202ENST00000546274 RPGRIP1LQ68CZ1 1315 aa9.83□□□□□ -0.84
UBR1-202ENST00000546274 ZMYM3Q14202 1370 aa9.82□□□□□ -0.84
UBR1-202ENST00000546274 LETM1O95202 739 aaPredicted RBP9.82□□□□□ -0.84
UBR1-202ENST00000546274 TERF1P54274 439 aa9.82□□□□□ -0.84
UBR1-202ENST00000546274 JARID2Q92833 1246 aaPredicted RBP9.82□□□□□ -0.84
UBR1-202ENST00000546274 GTPBP4Q9BZE4 634 aaKnown RBP9.82□□□□□ -0.84
UBR1-202ENST00000546274 NSD2O96028 1365 aa9.81□□□□□ -0.84
UBR1-202ENST00000546274 DYNC1I1O14576 645 aa9.81□□□□□ -0.84
UBR1-202ENST00000546274 TSC1Q92574 1164 aa9.81□□□□□ -0.84
UBR1-202ENST00000546274 BCL2L13Q9BXK5 485 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms