RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
SOD2-216ENST00000546260 DRC1Q96MC2 740 aa12.44□□□□□ -0.42
SOD2-216ENST00000546260 CD2BP2O95400 341 aaKnown RBP12.44□□□□□ -0.42
SOD2-216ENST00000546260 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
SOD2-216ENST00000546260 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
SOD2-216ENST00000546260 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
SOD2-216ENST00000546260 INTS3Q68E01 1043 aaKnown RBP12.44□□□□□ -0.42
SOD2-216ENST00000546260 AK7Q96M32 723 aa12.44□□□□□ -0.42
SOD2-216ENST00000546260 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
SOD2-216ENST00000546260 RPRD2Q5VT52 1461 aaKnown RBP12.43□□□□□ -0.42
SOD2-216ENST00000546260 REC8O95072 547 aa12.43□□□□□ -0.42
SOD2-216ENST00000546260 BMS1Q14692 1282 aaKnown RBP12.43□□□□□ -0.42
SOD2-216ENST00000546260 ZNF397Q8NF99 534 aaPredicted RBP12.43□□□□□ -0.42
SOD2-216ENST00000546260 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
SOD2-216ENST00000546260 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
SOD2-216ENST00000546260 TERF2Q15554 542 aa12.43□□□□□ -0.42
SOD2-216ENST00000546260 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
SOD2-216ENST00000546260 TRMT1Q9NXH9 659 aaKnown RBP12.43□□□□□ -0.42
SOD2-216ENST00000546260 LOC102724159A0A0B4J2E5 919 aa12.43□□□□□ -0.42
SOD2-216ENST00000546260 PWP2Q15269 919 aaKnown RBP12.43□□□□□ -0.42
SOD2-216ENST00000546260 ZNF644Q9H582 1327 aaPredicted RBP12.42□□□□□ -0.42
SOD2-216ENST00000546260 PTPN14Q15678 1187 aa12.42□□□□□ -0.42
SOD2-216ENST00000546260 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
SOD2-216ENST00000546260 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
SOD2-216ENST00000546260 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
SOD2-216ENST00000546260 FAM193AP78312 1265 aa12.42□□□□□ -0.42
SOD2-216ENST00000546260 FKBP5Q13451 457 aaPredicted RBP12.42□□□□□ -0.42
SOD2-216ENST00000546260 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
SOD2-216ENST00000546260 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
SOD2-216ENST00000546260 BECN2A8MW95 431 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 PTGS1P23219 599 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 UVSSAQ2YD98 709 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 SETQ01105 290 aaPredicted RBP12.41□□□□□ -0.42
SOD2-216ENST00000546260 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 NEK11Q8NG66 645 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 SMTNL1A8MU46 457 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 HNRNPH2P55795 449 aaKnown RBP12.41□□□□□ -0.42
SOD2-216ENST00000546260 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 CEP135Q66GS9 1140 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 TTLL5Q6EMB2 1281 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 CCDC186Q7Z3E2 898 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 LMAN1P49257 510 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 CNPY4Q8N129 248 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
SOD2-216ENST00000546260 LRRFIP2Q9Y608 721 aaKnown RBP12.41□□□□□ -0.42
SOD2-216ENST00000546260 IGF1RP08069 1367 aa12.41□□□□□ -0.42
SOD2-216ENST00000546260 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
SOD2-216ENST00000546260 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
SOD2-216ENST00000546260 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
SOD2-216ENST00000546260 NGEFQ8N5V2 710 aa12.4□□□□□ -0.42
SOD2-216ENST00000546260 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
SOD2-216ENST00000546260 CCDC192P0DO97 292 aa12.4□□□□□ -0.42
SOD2-216ENST00000546260 FILIP1Q7Z7B0 1213 aa12.4□□□□□ -0.42
SOD2-216ENST00000546260 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.42
SOD2-216ENST00000546260 CUX1P39880 1505 aa12.4□□□□□ -0.42
SOD2-216ENST00000546260 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.42
SOD2-216ENST00000546260 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
SOD2-216ENST00000546260 EXOSC9Q06265 439 aaKnown RBP12.4□□□□□ -0.43
SOD2-216ENST00000546260 TXLNBQ8N3L3 684 aa12.4□□□□□ -0.43
SOD2-216ENST00000546260 PYCARDQ9ULZ3 195 aa12.4□□□□□ -0.43
SOD2-216ENST00000546260 VPS37CA5D8V6 355 aaPredicted RBP12.39□□□□□ -0.43
SOD2-216ENST00000546260 RUNDC1Q96C34 613 aa12.39□□□□□ -0.43
SOD2-216ENST00000546260 MYCBPQ99417 103 aaPredicted RBP12.39□□□□□ -0.43
SOD2-216ENST00000546260 ANO2Q9NQ90 1003 aa12.39□□□□□ -0.43
SOD2-216ENST00000546260 PAXBP1Q9Y5B6 917 aa12.39□□□□□ -0.43
SOD2-216ENST00000546260 ATP6V1DQ9Y5K8 247 aa12.39□□□□□ -0.43
SOD2-216ENST00000546260 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
SOD2-216ENST00000546260 TMEM57Q8N5G2 664 aa12.39□□□□□ -0.43
SOD2-216ENST00000546260 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
SOD2-216ENST00000546260 CTR9Q6PD62 1173 aa12.38□□□□□ -0.43
SOD2-216ENST00000546260 ELF2Q15723 593 aa12.38□□□□□ -0.43
SOD2-216ENST00000546260 UBXN4Q92575 508 aa12.38□□□□□ -0.43
SOD2-216ENST00000546260 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
SOD2-216ENST00000546260 CASKIN1Q8WXD9 1431 aa12.38□□□□□ -0.43
SOD2-216ENST00000546260 NCBP1Q09161 790 aaKnown RBP12.38□□□□□ -0.43
SOD2-216ENST00000546260 BMP2KLQ5H9B9 411 aa12.38□□□□□ -0.43
SOD2-216ENST00000546260 RILPL2Q969X0 211 aa12.38□□□□□ -0.43
SOD2-216ENST00000546260 KDM4AO75164 1064 aa12.37□□□□□ -0.43
SOD2-216ENST00000546260 CAMK4Q16566 473 aa12.37□□□□□ -0.43
SOD2-216ENST00000546260 KIF18AQ8NI77 898 aa12.37□□□□□ -0.43
SOD2-216ENST00000546260 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
SOD2-216ENST00000546260 ATF7IPQ6VMQ6 1270 aa12.37□□□□□ -0.43
SOD2-216ENST00000546260 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
SOD2-216ENST00000546260 CHMP7Q8WUX9 453 aaPredicted RBP12.37□□□□□ -0.43
SOD2-216ENST00000546260 IBSPP21815 317 aaPredicted RBP12.36□□□□□ -0.43
SOD2-216ENST00000546260 AXDND1Q5T1B0 1012 aaPredicted RBP12.36□□□□□ -0.43
SOD2-216ENST00000546260 TDO2P48775 406 aa12.36□□□□□ -0.43
SOD2-216ENST00000546260 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
SOD2-216ENST00000546260 DDX41Q9UJV9 622 aaKnown RBP12.36□□□□□ -0.43
SOD2-216ENST00000546260 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
SOD2-216ENST00000546260 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
SOD2-216ENST00000546260 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
SOD2-216ENST00000546260 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
SOD2-216ENST00000546260 ZMYM4Q5VZL5 1548 aa12.36□□□□□ -0.43
SOD2-216ENST00000546260 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
SOD2-216ENST00000546260 CTNNA3Q9UI47 895 aa12.36□□□□□ -0.43
SOD2-216ENST00000546260 RAD51AP2Q09MP3 1159 aa12.35□□□□□ -0.43
SOD2-216ENST00000546260 PER1O15534 1290 aaPredicted RBP12.35□□□□□ -0.43
SOD2-216ENST00000546260 BICD2Q8TD16 824 aa12.35□□□□□ -0.43
SOD2-216ENST00000546260 SMC3Q9UQE7 1217 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms