RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 HDGFL2Q7Z4V5 671 aaPredicted RBP28.88■■■□□ 2.21
SCARB1-211ENST00000546215 MYOM1P52179 1685 aa28.88■■■□□ 2.21
SCARB1-211ENST00000546215 ALS2Q96Q42 1657 aa28.88■■■□□ 2.21
SCARB1-211ENST00000546215 KIF7Q2M1P5 1343 aa28.88■■■□□ 2.21
SCARB1-211ENST00000546215 ARHGEF10O15013 1369 aa28.86■■■□□ 2.21
SCARB1-211ENST00000546215 SPATA31A6Q5VVP1 1343 aa28.86■■■□□ 2.21
SCARB1-211ENST00000546215 LMOD2Q6P5Q4 547 aa28.86■■■□□ 2.21
SCARB1-211ENST00000546215 MON2Q7Z3U7 1717 aa28.86■■■□□ 2.21
SCARB1-211ENST00000546215 ANKRD36BQ8N2N9 1353 aa28.86■■■□□ 2.21
SCARB1-211ENST00000546215 COL22A1Q8NFW1 1626 aaPredicted RBP28.85■■■□□ 2.21
SCARB1-211ENST00000546215 TTC21BQ7Z4L5 1316 aa28.83■■■□□ 2.21
SCARB1-211ENST00000546215 NRKQ7Z2Y5 1582 aa28.82■■■□□ 2.2
SCARB1-211ENST00000546215 ABTB2Q8N961 1025 aa28.81■■■□□ 2.2
SCARB1-211ENST00000546215 WASHC2AQ641Q2 1341 aa28.81■■■□□ 2.2
SCARB1-211ENST00000546215 EDC4Q6P2E9 1401 aaKnown RBP28.8■■■□□ 2.2
SCARB1-211ENST00000546215 CCDC7Q96M83 1385 aa28.79■■■□□ 2.2
SCARB1-211ENST00000546215 TTC21AQ8NDW8 1320 aa28.79■■■□□ 2.2
SCARB1-211ENST00000546215 LRP6O75581 1613 aa28.77■■■□□ 2.2
SCARB1-211ENST00000546215 NUTM2BA6NNL0 878 aaPredicted RBP28.77■■■□□ 2.2
SCARB1-211ENST00000546215 NUTM2EB1AL46 878 aaPredicted RBP28.77■■■□□ 2.2
SCARB1-211ENST00000546215 NUTM2GQ5VZR2 741 aa28.77■■■□□ 2.2
SCARB1-211ENST00000546215 NUTM2AQ8IVF1 878 aaPredicted RBP28.77■■■□□ 2.2
SCARB1-211ENST00000546215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.76■■■□□ 2.192e-8■□□□□ 8.6
SCARB1-211ENST00000546215 CABLES1Q8TDN4 633 aa28.76■■■□□ 2.19
SCARB1-211ENST00000546215 CARD14Q9BXL6 1004 aa28.75■■■□□ 2.19
SCARB1-211ENST00000546215 PIK3C2AO00443 1686 aa28.75■■■□□ 2.19
SCARB1-211ENST00000546215 MED1Q15648 1581 aaPredicted RBP28.74■■■□□ 2.19
SCARB1-211ENST00000546215 PLEKHG5O94827 1062 aa28.74■■■□□ 2.19
SCARB1-211ENST00000546215 NLRP6P59044 892 aa28.72■■■□□ 2.19
SCARB1-211ENST00000546215 NLRP13Q86W25 1043 aa28.72■■■□□ 2.19
SCARB1-211ENST00000546215 PANK3Q9H999 370 aa28.72■■■□□ 2.19
SCARB1-211ENST00000546215 CRYBG1Q9Y4K1 1723 aa28.71■■■□□ 2.19
SCARB1-211ENST00000546215 NME9Q86XW9 330 aa28.71■■■□□ 2.19
SCARB1-211ENST00000546215 ABCA3Q99758 1704 aa28.7■■■□□ 2.19
SCARB1-211ENST00000546215 USP19O94966 1318 aa28.7■■■□□ 2.18
SCARB1-211ENST00000546215 ZRANB1Q9UGI0 708 aa28.69■■■□□ 2.18
SCARB1-211ENST00000546215 NSD3Q9BZ95 1437 aa28.68■■■□□ 2.18
SCARB1-211ENST00000546215 USP31Q70CQ4 1352 aa28.68■■■□□ 2.18
SCARB1-211ENST00000546215 ADAMTS2O95450 1211 aa28.68■■■□□ 2.18
SCARB1-211ENST00000546215 HAP1P54257 671 aaPredicted RBP28.67■■■□□ 2.18
SCARB1-211ENST00000546215 MARF1Q9Y4F3 1742 aaKnown RBP28.66■■■□□ 2.18
SCARB1-211ENST00000546215 PHRF1Q9P1Y6 1649 aaKnown RBP28.65■■■□□ 2.18
SCARB1-211ENST00000546215 FYB1O15117 783 aa28.65■■■□□ 2.18
SCARB1-211ENST00000546215 MEX3CQ5U5Q3 659 aaKnown RBP28.65■■■□□ 2.18
SCARB1-211ENST00000546215 GCP02774 474 aa28.63■■■□□ 2.17
SCARB1-211ENST00000546215 USP54Q70EL1 1684 aa28.63■■■□□ 2.17
SCARB1-211ENST00000546215 SLIT3O75094 1523 aa28.62■■■□□ 2.17
SCARB1-211ENST00000546215 OVOS2A0A0J9YW53 1432 aa28.61■■■□□ 2.17
SCARB1-211ENST00000546215 OVOS2Q6IE36 1432 aa28.61■■■□□ 2.17
SCARB1-211ENST00000546215 C8orf37Q96NL8 207 aa28.61■■■□□ 2.17
SCARB1-211ENST00000546215 CGNL1Q0VF96 1302 aa28.6■■■□□ 2.17
SCARB1-211ENST00000546215 GGNBP2Q9H3C7 697 aa28.59■■■□□ 2.17
SCARB1-211ENST00000546215 KIF20BQ96Q89 1820 aa28.58■■■□□ 2.17
SCARB1-211ENST00000546215 PER1O15534 1290 aaPredicted RBP28.58■■■□□ 2.17
SCARB1-211ENST00000546215 COG3Q96JB2 828 aa28.58■■■□□ 2.17
SCARB1-211ENST00000546215 ZC3H6P61129 1189 aaKnown RBP28.57■■■□□ 2.16
SCARB1-211ENST00000546215 KCNH5Q8NCM2 988 aa28.57■■■□□ 2.16
SCARB1-211ENST00000546215 FAM83GA6ND36 823 aa28.56■■■□□ 2.16
SCARB1-211ENST00000546215 NGLY1Q96IV0 654 aa28.56■■■□□ 2.16
SCARB1-211ENST00000546215 KNSTRNQ9Y448 316 aa28.56■■■□□ 2.16
SCARB1-211ENST00000546215 KIAA0232Q92628 1395 aa28.55■■■□□ 2.16
SCARB1-211ENST00000546215 CPDO75976 1380 aa28.55■■■□□ 2.16
SCARB1-211ENST00000546215 SOX12O15370 315 aa28.54■■■□□ 2.16
SCARB1-211ENST00000546215 FNBP4Q8N3X1 1017 aaPredicted RBP28.54■■■□□ 2.16
SCARB1-211ENST00000546215 NFAT5O94916 1531 aa28.53■■■□□ 2.16
SCARB1-211ENST00000546215 PRDM11Q9NQV5 511 aa28.53■■■□□ 2.16
SCARB1-211ENST00000546215 RGS17Q9UGC6 210 aaPredicted RBP28.53■■■□□ 2.16
SCARB1-211ENST00000546215 AFF2P51816 1311 aa28.53■■■□□ 2.16
SCARB1-211ENST00000546215 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
SCARB1-211ENST00000546215 AMER1Q5JTC6 1135 aaPredicted RBP28.5■■■□□ 2.15
SCARB1-211ENST00000546215 ARHGEF25Q86VW2 580 aa28.5■■■□□ 2.15
SCARB1-211ENST00000546215 SLIT2O94813 1529 aa28.5■■■□□ 2.15
SCARB1-211ENST00000546215 CHRNA2Q15822 529 aa28.5■■■□□ 2.15
SCARB1-211ENST00000546215 ZNF316A6NFI3 1004 aaPredicted RBP28.49■■■□□ 2.15
SCARB1-211ENST00000546215 COL14A1Q05707 1796 aaKnown RBP28.49■■■□□ 2.15
SCARB1-211ENST00000546215 NSD2O96028 1365 aa28.48■■■□□ 2.15
SCARB1-211ENST00000546215 BCL9LQ86UU0 1499 aa28.47■■■□□ 2.15
SCARB1-211ENST00000546215 FBLN1P23142 703 aa28.46■■■□□ 2.15
SCARB1-211ENST00000546215 USP21Q9UK80 565 aa28.46■■■□□ 2.15
SCARB1-211ENST00000546215 PLCH1Q4KWH8 1693 aa28.46■■■□□ 2.15
SCARB1-211ENST00000546215 ANKRD26Q9UPS8 1709 aa28.45■■■□□ 2.15
SCARB1-211ENST00000546215 ZNF772Q68DY9 489 aaPredicted RBP28.45■■■□□ 2.14
SCARB1-211ENST00000546215 BTG4Q9NY30 223 aa28.45■■■□□ 2.14
SCARB1-211ENST00000546215 NWD2Q9ULI1 1742 aa28.44■■■□□ 2.14
SCARB1-211ENST00000546215 DDX10Q13206 875 aaKnown RBP28.44■■■□□ 2.14
SCARB1-211ENST00000546215 AATKQ6ZMQ8 1374 aa28.43■■■□□ 2.14
SCARB1-211ENST00000546215 ZBTB7CA1YPR0 619 aa28.43■■■□□ 2.14
SCARB1-211ENST00000546215 LMO7Q8WWI1 1683 aa28.43■■■□□ 2.14
SCARB1-211ENST00000546215 COL18A1P39060 1754 aa28.42■■■□□ 2.14
SCARB1-211ENST00000546215 UNC5CLQ8IV45 518 aa28.42■■■□□ 2.14
SCARB1-211ENST00000546215 NPC1L1Q9UHC9 1359 aa28.41■■■□□ 2.14
SCARB1-211ENST00000546215 CAMTA1Q9Y6Y1 1673 aa28.41■■■□□ 2.14
SCARB1-211ENST00000546215 LTN1O94822 1766 aa28.41■■■□□ 2.14
SCARB1-211ENST00000546215 AXIN2Q9Y2T1 843 aa28.4■■■□□ 2.14
SCARB1-211ENST00000546215 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.39■■■□□ 2.14
SCARB1-211ENST00000546215 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
SCARB1-211ENST00000546215 MAP3K19Q56UN5 1328 aa28.39■■■□□ 2.13
SCARB1-211ENST00000546215 RRS1Q15050 365 aaKnown RBP28.38■■■□□ 2.13
SCARB1-211ENST00000546215 CC2D1BQ5T0F9 858 aaKnown RBP28.38■■■□□ 2.13
SCARB1-211ENST00000546215 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms