RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ADAMTS2O95450 1211 aa24.25■■□□□ 1.47
CD9-211ENST00000546073 NLRP13Q86W25 1043 aa24.25■■□□□ 1.47
CD9-211ENST00000546073 SLC12A5Q9H2X9 1139 aa24.24■■□□□ 1.47
CD9-211ENST00000546073 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
CD9-211ENST00000546073 NGLY1Q96IV0 654 aa24.23■■□□□ 1.47
CD9-211ENST00000546073 SHPRHQ149N8 1683 aa24.23■■□□□ 1.47
CD9-211ENST00000546073 C8orf37Q96NL8 207 aa24.21■■□□□ 1.47
CD9-211ENST00000546073 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
CD9-211ENST00000546073 ZNF772Q68DY9 489 aaPredicted RBP24.2■■□□□ 1.46
CD9-211ENST00000546073 USP6P35125 1406 aa24.19■■□□□ 1.46
CD9-211ENST00000546073 NLRP6P59044 892 aa24.19■■□□□ 1.46
CD9-211ENST00000546073 MED1Q15648 1581 aaPredicted RBP24.19■■□□□ 1.46
CD9-211ENST00000546073 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
CD9-211ENST00000546073 NUTM2GQ5VZR2 741 aa24.18■■□□□ 1.46
CD9-211ENST00000546073 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
CD9-211ENST00000546073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.16■■□□□ 1.46
CD9-211ENST00000546073 CABLES1Q8TDN4 633 aa24.16■■□□□ 1.46
CD9-211ENST00000546073 CPSF1Q10570 1443 aaKnown RBP24.13■■□□□ 1.45
CD9-211ENST00000546073 KCNH5Q8NCM2 988 aa24.12■■□□□ 1.45
CD9-211ENST00000546073 ANKRD36BQ8N2N9 1353 aa24.12■■□□□ 1.45
CD9-211ENST00000546073 AFF2P51816 1311 aa24.1■■□□□ 1.45
CD9-211ENST00000546073 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
CD9-211ENST00000546073 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
CD9-211ENST00000546073 PRDM11Q9NQV5 511 aa24.1■■□□□ 1.45
CD9-211ENST00000546073 A0A1W2PP64 1363 aa24.1■■□□□ 1.45
CD9-211ENST00000546073 USP21Q9UK80 565 aa24.09■■□□□ 1.45
CD9-211ENST00000546073 LRP6O75581 1613 aa24.09■■□□□ 1.45
CD9-211ENST00000546073 ZBTB7CA1YPR0 619 aa24.07■■□□□ 1.44
CD9-211ENST00000546073 COG3Q96JB2 828 aa24.07■■□□□ 1.44
CD9-211ENST00000546073 GCP02774 474 aa24.06■■□□□ 1.44
CD9-211ENST00000546073 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
CD9-211ENST00000546073 TRPM3Q9HCF6 1732 aaPredicted RBP24.06■■□□□ 1.44
CD9-211ENST00000546073 TRPC5Q9UL62 973 aaPredicted RBP24.04■■□□□ 1.44
CD9-211ENST00000546073 FNBP4Q8N3X1 1017 aaPredicted RBP24.03■■□□□ 1.44
CD9-211ENST00000546073 QTRT2Q9H974 415 aaKnown RBP24.03■■□□□ 1.44
CD9-211ENST00000546073 SSH2Q76I76 1423 aa24.02■■□□□ 1.44
CD9-211ENST00000546073 SOX12O15370 315 aa24.02■■□□□ 1.44
CD9-211ENST00000546073 EVA1CP58658 441 aa24.02■■□□□ 1.44
CD9-211ENST00000546073 NME9Q86XW9 330 aa24.02■■□□□ 1.44
CD9-211ENST00000546073 CCDC9Q9Y3X0 531 aaKnown RBP24.02■■□□□ 1.44
CD9-211ENST00000546073 USP19O94966 1318 aa24.02■■□□□ 1.44
CD9-211ENST00000546073 ALS2Q96Q42 1657 aa24.02■■□□□ 1.44
CD9-211ENST00000546073 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
CD9-211ENST00000546073 CD163L1Q9NR16 1453 aa24■■□□□ 1.43
CD9-211ENST00000546073 RXRBP28702 533 aa24■■□□□ 1.43
CD9-211ENST00000546073 UNC5CLQ8IV45 518 aa24■■□□□ 1.43
CD9-211ENST00000546073 PANK3Q9H999 370 aa24■■□□□ 1.43
CD9-211ENST00000546073 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
CD9-211ENST00000546073 FAM83GA6ND36 823 aa23.99■■□□□ 1.43
CD9-211ENST00000546073 BTG4Q9NY30 223 aa23.99■■□□□ 1.43
CD9-211ENST00000546073 KIF7Q2M1P5 1343 aa23.99■■□□□ 1.43
CD9-211ENST00000546073 AKAP12Q02952 1782 aa23.98■■□□□ 1.43
CD9-211ENST00000546073 USP31Q70CQ4 1352 aa23.98■■□□□ 1.43
CD9-211ENST00000546073 KIAA0232Q92628 1395 aa23.98■■□□□ 1.43
CD9-211ENST00000546073 C11orf95C9JLR9 678 aaPredicted RBP23.96■■□□□ 1.43
CD9-211ENST00000546073 RBM6P78332 1123 aaKnown RBP23.96■■□□□ 1.43
CD9-211ENST00000546073 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.42
CD9-211ENST00000546073 CHRNA2Q15822 529 aa23.95■■□□□ 1.42
CD9-211ENST00000546073 RGS17Q9UGC6 210 aaPredicted RBP23.95■■□□□ 1.42
CD9-211ENST00000546073 CPDO75976 1380 aa23.94■■□□□ 1.42
CD9-211ENST00000546073 MON2Q7Z3U7 1717 aa23.94■■□□□ 1.42
CD9-211ENST00000546073 GGNBP2Q9H3C7 697 aa23.94■■□□□ 1.42
CD9-211ENST00000546073 FYB1O15117 783 aa23.93■■□□□ 1.42
CD9-211ENST00000546073 POTEAQ6S8J7 498 aa23.93■■□□□ 1.42
CD9-211ENST00000546073 STRN4Q9NRL3 753 aa23.93■■□□□ 1.42
CD9-211ENST00000546073 CCDC7Q96M83 1385 aa23.92■■□□□ 1.42
CD9-211ENST00000546073 CARD14Q9BXL6 1004 aa23.92■■□□□ 1.42
CD9-211ENST00000546073 ZRANB1Q9UGI0 708 aa23.92■■□□□ 1.42
CD9-211ENST00000546073 CSB-PGBD3P0DP91 1061 aa23.9■■□□□ 1.42
CD9-211ENST00000546073 VPS72Q15906 364 aa23.9■■□□□ 1.42
CD9-211ENST00000546073 AMPHP49418 695 aa23.89■■□□□ 1.41
CD9-211ENST00000546073 GJD4Q96KN9 370 aaPredicted RBP23.89■■□□□ 1.41
CD9-211ENST00000546073 NRKQ7Z2Y5 1582 aa23.88■■□□□ 1.41
CD9-211ENST00000546073 A0A0G2JS52 829 aa23.88■■□□□ 1.41
CD9-211ENST00000546073 MYT1Q01538 1121 aa23.88■■□□□ 1.41
CD9-211ENST00000546073 ARHGEF25Q86VW2 580 aa23.88■■□□□ 1.41
CD9-211ENST00000546073 PIK3C2AO00443 1686 aa23.88■■□□□ 1.41
CD9-211ENST00000546073 SLIT2O94813 1529 aa23.88■■□□□ 1.41
CD9-211ENST00000546073 AATKQ6ZMQ8 1374 aa23.88■■□□□ 1.41
CD9-211ENST00000546073 WASHC2AQ641Q2 1341 aa23.87■■□□□ 1.41
CD9-211ENST00000546073 SLIT3O75094 1523 aa23.87■■□□□ 1.41
CD9-211ENST00000546073 COL14A1Q05707 1796 aaKnown RBP23.87■■□□□ 1.41
CD9-211ENST00000546073 PHRF1Q9P1Y6 1649 aaKnown RBP23.86■■□□□ 1.41
CD9-211ENST00000546073 MARF1Q9Y4F3 1742 aaKnown RBP23.86■■□□□ 1.41
CD9-211ENST00000546073 MORC1Q86VD1 984 aa23.85■■□□□ 1.41
CD9-211ENST00000546073 NSD2O96028 1365 aa23.85■■□□□ 1.41
CD9-211ENST00000546073 BCL9LQ86UU0 1499 aa23.85■■□□□ 1.41
CD9-211ENST00000546073 ABCA3Q99758 1704 aa23.84■■□□□ 1.41
CD9-211ENST00000546073 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
CD9-211ENST00000546073 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
CD9-211ENST00000546073 TOM1L2Q6ZVM7 507 aa23.83■■□□□ 1.41
CD9-211ENST00000546073 ATRNO75882 1429 aa23.83■■□□□ 1.4
CD9-211ENST00000546073 MYOM1P52179 1685 aa23.82■■□□□ 1.4
CD9-211ENST00000546073 USP35Q9P2H5 1018 aa23.81■■□□□ 1.4
CD9-211ENST00000546073 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
CD9-211ENST00000546073 IP6K1Q92551 441 aa23.79■■□□□ 1.4
CD9-211ENST00000546073 NWD2Q9ULI1 1742 aa23.79■■□□□ 1.4
CD9-211ENST00000546073 TNNT2P45379 298 aaPredicted RBP23.78■■□□□ 1.4
CD9-211ENST00000546073 ILDR2Q71H61 639 aa23.78■■□□□ 1.4
CD9-211ENST00000546073 CRYBG1Q9Y4K1 1723 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms