RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 MTHFSP49914 203 aa13.6□□□□□ -0.23
CIT-218ENST00000546026 NRKQ7Z2Y5 1582 aa13.6□□□□□ -0.23
CIT-218ENST00000546026 PMFBP1Q8TBY8 1022 aa13.6□□□□□ -0.23
CIT-218ENST00000546026 PHF8Q9UPP1 1060 aa13.6□□□□□ -0.23
CIT-218ENST00000546026 STRCP1A6NGW2 1772 aa13.59□□□□□ -0.23
CIT-218ENST00000546026 NME9Q86XW9 330 aa13.59□□□□□ -0.23
CIT-218ENST00000546026 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
CIT-218ENST00000546026 COG3Q96JB2 828 aa13.59□□□□□ -0.23
CIT-218ENST00000546026 DCCP43146 1447 aa13.58□□□□□ -0.24
CIT-218ENST00000546026 BLMP54132 1417 aaPredicted RBP13.58□□□□□ -0.24
CIT-218ENST00000546026 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
CIT-218ENST00000546026 TMEM94Q12767 1356 aa13.58□□□□□ -0.24
CIT-218ENST00000546026 AATKQ6ZMQ8 1374 aa13.58□□□□□ -0.24
CIT-218ENST00000546026 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
CIT-218ENST00000546026 ATF3P18847 181 aa13.55□□□□□ -0.24
CIT-218ENST00000546026 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
CIT-218ENST00000546026 PNPLA6Q8IY17 1366 aa13.55□□□□□ -0.24
CIT-218ENST00000546026 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
CIT-218ENST00000546026 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
CIT-218ENST00000546026 OVOS2A0A0J9YW53 1432 aa13.54□□□□□ -0.24
CIT-218ENST00000546026 OVOS2Q6IE36 1432 aa13.54□□□□□ -0.24
CIT-218ENST00000546026 C1orf167Q5SNV9 1468 aa13.54□□□□□ -0.24
CIT-218ENST00000546026 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
CIT-218ENST00000546026 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
CIT-218ENST00000546026 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
CIT-218ENST00000546026 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
CIT-218ENST00000546026 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
CIT-218ENST00000546026 MSH6P52701 1360 aa13.52□□□□□ -0.25
CIT-218ENST00000546026 COL3A1P02461 1466 aaPredicted RBP13.52□□□□□ -0.25
CIT-218ENST00000546026 LRRC7Q96NW7 1537 aa13.52□□□□□ -0.25
CIT-218ENST00000546026 KIF1AQ12756 1690 aa13.52□□□□□ -0.25
CIT-218ENST00000546026 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
CIT-218ENST00000546026 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
CIT-218ENST00000546026 MST1RQ04912 1400 aa13.51□□□□□ -0.25
CIT-218ENST00000546026 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
CIT-218ENST00000546026 PSME1Q06323 249 aa13.51□□□□□ -0.25
CIT-218ENST00000546026 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
CIT-218ENST00000546026 ORAI2Q96SN7 254 aa13.51□□□□□ -0.25
CIT-218ENST00000546026 DIAPH1O60610 1272 aaKnown RBP13.5□□□□□ -0.25
CIT-218ENST00000546026 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
CIT-218ENST00000546026 PIK3C2AO00443 1686 aa13.49□□□□□ -0.25
CIT-218ENST00000546026 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
CIT-218ENST00000546026 NLRP6P59044 892 aa13.48□□□□□ -0.25
CIT-218ENST00000546026 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
CIT-218ENST00000546026 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
CIT-218ENST00000546026 RUNDC1Q96C34 613 aa13.48□□□□□ -0.25
CIT-218ENST00000546026 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
CIT-218ENST00000546026 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
CIT-218ENST00000546026 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
CIT-218ENST00000546026 FBLN1P23142 703 aa13.47□□□□□ -0.25
CIT-218ENST00000546026 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
CIT-218ENST00000546026 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
CIT-218ENST00000546026 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
CIT-218ENST00000546026 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
CIT-218ENST00000546026 FOXO3O43524 673 aa13.46□□□□□ -0.25
CIT-218ENST00000546026 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
CIT-218ENST00000546026 IL13P35225 146 aa13.45□□□□□ -0.26
CIT-218ENST00000546026 RRS1Q15050 365 aaKnown RBP13.45□□□□□ -0.26
CIT-218ENST00000546026 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
CIT-218ENST00000546026 APAF1O14727 1248 aa13.44□□□□□ -0.26
CIT-218ENST00000546026 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
CIT-218ENST00000546026 FCHSD2O94868 740 aa13.44□□□□□ -0.26
CIT-218ENST00000546026 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
CIT-218ENST00000546026 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
CIT-218ENST00000546026 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
CIT-218ENST00000546026 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
CIT-218ENST00000546026 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
CIT-218ENST00000546026 ZNF521Q96K83 1311 aa13.42□□□□□ -0.26
CIT-218ENST00000546026 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
CIT-218ENST00000546026 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
CIT-218ENST00000546026 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
CIT-218ENST00000546026 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
CIT-218ENST00000546026 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
CIT-218ENST00000546026 NUTM2GQ5VZR2 741 aa13.41□□□□□ -0.26
CIT-218ENST00000546026 TCP11L2Q8N4U5 519 aa13.41□□□□□ -0.26
CIT-218ENST00000546026 FLT4P35916 1363 aa13.41□□□□□ -0.26
CIT-218ENST00000546026 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
CIT-218ENST00000546026 SENP3-EIF4A1A0A087X0R7 540 aa13.4□□□□□ -0.26
CIT-218ENST00000546026 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
CIT-218ENST00000546026 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
CIT-218ENST00000546026 USP19O94966 1318 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 SLIT3O75094 1523 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 AMPHP49418 695 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
CIT-218ENST00000546026 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
CIT-218ENST00000546026 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 PHF23Q9BUL5 403 aaPredicted RBP13.39□□□□□ -0.27
CIT-218ENST00000546026 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
CIT-218ENST00000546026 ALS2Q96Q42 1657 aa13.38□□□□□ -0.27
CIT-218ENST00000546026 SOX12O15370 315 aa13.38□□□□□ -0.27
CIT-218ENST00000546026 NEFMP07197 916 aa13.38□□□□□ -0.27
CIT-218ENST00000546026 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
CIT-218ENST00000546026 NFAT5O94916 1531 aa13.38□□□□□ -0.27
CIT-218ENST00000546026 PXDNQ92626 1479 aa13.37□□□□□ -0.27
CIT-218ENST00000546026 HOXC9P31274 260 aa13.37□□□□□ -0.27
CIT-218ENST00000546026 WDR63Q8IWG1 891 aa13.37□□□□□ -0.27
CIT-218ENST00000546026 WWC1Q8IX03 1113 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms