RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 TRPC5Q9UL62 973 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-205ENST00000545868 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
GABRB3-205ENST00000545868 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
GABRB3-205ENST00000545868 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
GABRB3-205ENST00000545868 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
GABRB3-205ENST00000545868 C14orf93Q9H972 538 aaKnown RBP14.34□□□□□ -0.11
GABRB3-205ENST00000545868 SPATA31A3Q5VYP0 1347 aa14.34□□□□□ -0.11
GABRB3-205ENST00000545868 CFAP70Q5T0N1 1121 aa14.33□□□□□ -0.12
GABRB3-205ENST00000545868 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
GABRB3-205ENST00000545868 RALGAPBQ86X10 1494 aa14.32□□□□□ -0.12
GABRB3-205ENST00000545868 RAB3GAP2Q9H2M9 1393 aa14.32□□□□□ -0.12
GABRB3-205ENST00000545868 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
GABRB3-205ENST00000545868 SIRT1Q96EB6 747 aa14.31□□□□□ -0.12
GABRB3-205ENST00000545868 KRT28Q7Z3Y7 464 aa14.29□□□□□ -0.12
GABRB3-205ENST00000545868 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
GABRB3-205ENST00000545868 DHX57Q6P158 1386 aaKnown RBP14.29□□□□□ -0.12
GABRB3-205ENST00000545868 SAFB2Q14151 953 aaKnown RBP eCLIP14.28□□□□□ -0.12
GABRB3-205ENST00000545868 PRAM1Q96QH2 718 aa14.28□□□□□ -0.12
GABRB3-205ENST00000545868 PHF8Q9UPP1 1060 aa14.28□□□□□ -0.12
GABRB3-205ENST00000545868 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.12
GABRB3-205ENST00000545868 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.12
GABRB3-205ENST00000545868 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
GABRB3-205ENST00000545868 TULP4Q9NRJ4 1543 aa14.26□□□□□ -0.13
GABRB3-205ENST00000545868 ANKARQ7Z5J8 1434 aa14.26□□□□□ -0.13
GABRB3-205ENST00000545868 SBNO1A3KN83 1393 aa14.26□□□□□ -0.13
GABRB3-205ENST00000545868 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
GABRB3-205ENST00000545868 CABLES1Q8TDN4 633 aa14.26□□□□□ -0.13
GABRB3-205ENST00000545868 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
GABRB3-205ENST00000545868 PRR36Q9H6K5 1346 aa14.24□□□□□ -0.13
GABRB3-205ENST00000545868 KIAA1210Q9ULL0 1709 aa14.24□□□□□ -0.13
GABRB3-205ENST00000545868 TNS1Q9HBL0 1735 aaKnown RBP14.23□□□□□ -0.13
GABRB3-205ENST00000545868 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
GABRB3-205ENST00000545868 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
GABRB3-205ENST00000545868 PMFBP1Q8TBY8 1022 aa14.22□□□□□ -0.13
GABRB3-205ENST00000545868 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
GABRB3-205ENST00000545868 THSD7AQ9UPZ6 1657 aa14.22□□□□□ -0.13
GABRB3-205ENST00000545868 ARHGEF10O15013 1369 aa14.22□□□□□ -0.13
GABRB3-205ENST00000545868 RGPD1P0DJD0 1748 aa14.21□□□□□ -0.13
GABRB3-205ENST00000545868 ACIN1Q9UKV3 1341 aaKnown RBP14.21□□□□□ -0.13
GABRB3-205ENST00000545868 TRAK1Q9UPV9 953 aa14.21□□□□□ -0.13
GABRB3-205ENST00000545868 ATP7BP35670 1465 aa14.2□□□□□ -0.14
GABRB3-205ENST00000545868 PSME1Q06323 249 aa14.2□□□□□ -0.14
GABRB3-205ENST00000545868 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
GABRB3-205ENST00000545868 MINK1Q8N4C8 1332 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-205ENST00000545868 FAM83GA6ND36 823 aa14.19□□□□□ -0.14
GABRB3-205ENST00000545868 VPS72Q15906 364 aa14.19□□□□□ -0.14
GABRB3-205ENST00000545868 POGKQ9P215 609 aa14.19□□□□□ -0.14
GABRB3-205ENST00000545868 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-205ENST00000545868 LMOD2Q6P5Q4 547 aa14.18□□□□□ -0.14
GABRB3-205ENST00000545868 CCDC125Q86Z20 511 aa14.18□□□□□ -0.14
GABRB3-205ENST00000545868 SEPT12Q8IYM1 358 aa14.18□□□□□ -0.14
GABRB3-205ENST00000545868 LRP5O75197 1615 aa14.17□□□□□ -0.14
GABRB3-205ENST00000545868 ONECUT3O60422 494 aaPredicted RBP14.17□□□□□ -0.14
GABRB3-205ENST00000545868 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
GABRB3-205ENST00000545868 DCAF11Q8TEB1 546 aa14.17□□□□□ -0.14
GABRB3-205ENST00000545868 KDM2AQ9Y2K7 1162 aa14.17□□□□□ -0.14
GABRB3-205ENST00000545868 DEFB132Q7Z7B7 95 aa14.16□□□□□ -0.14
GABRB3-205ENST00000545868 QRICH2Q9H0J4 1663 aa14.15□□□□□ -0.14
GABRB3-205ENST00000545868 NRKQ7Z2Y5 1582 aa14.15□□□□□ -0.14
GABRB3-205ENST00000545868 WASLO00401 505 aaPredicted RBP14.15□□□□□ -0.14
GABRB3-205ENST00000545868 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
GABRB3-205ENST00000545868 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
GABRB3-205ENST00000545868 EIF3AQ14152 1382 aaKnown RBP14.14□□□□□ -0.15
GABRB3-205ENST00000545868 LMO7Q8WWI1 1683 aa14.14□□□□□ -0.15
GABRB3-205ENST00000545868 GPRASP1Q5JY77 1395 aa14.13□□□□□ -0.15
GABRB3-205ENST00000545868 ECM2O94769 699 aaPredicted RBP14.13□□□□□ -0.15
GABRB3-205ENST00000545868 KRT27Q7Z3Y8 459 aa14.12□□□□□ -0.15
GABRB3-205ENST00000545868 BTG4Q9NY30 223 aa14.12□□□□□ -0.15
GABRB3-205ENST00000545868 CCDC9Q9Y3X0 531 aaKnown RBP14.12□□□□□ -0.15
GABRB3-205ENST00000545868 WNK3Q9BYP7 1800 aa14.11□□□□□ -0.15
GABRB3-205ENST00000545868 FAM98CQ17RN3 349 aaKnown RBP14.11□□□□□ -0.15
GABRB3-205ENST00000545868 RGPD5Q99666 1765 aa14.11□□□□□ -0.15
GABRB3-205ENST00000545868 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
GABRB3-205ENST00000545868 RREB1Q92766 1687 aa14.1□□□□□ -0.15
GABRB3-205ENST00000545868 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
GABRB3-205ENST00000545868 HRCP23327 699 aa14.09□□□□□ -0.15
GABRB3-205ENST00000545868 NUP188Q5SRE5 1749 aa14.09□□□□□ -0.15
GABRB3-205ENST00000545868 SPATA31A5Q5VU36 1347 aa14.09□□□□□ -0.15
GABRB3-205ENST00000545868 SPATA31A7Q8IWB4 1347 aa14.09□□□□□ -0.15
GABRB3-205ENST00000545868 POLR3AO14802 1390 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-205ENST00000545868 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
GABRB3-205ENST00000545868 PARP4Q9UKK3 1724 aaKnown RBP14.08□□□□□ -0.16
GABRB3-205ENST00000545868 FAM182BQ5T319 152 aa14.08□□□□□ -0.16
GABRB3-205ENST00000545868 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
GABRB3-205ENST00000545868 NUDT16Q96DE0 195 aaKnown RBP14.08□□□□□ -0.16
GABRB3-205ENST00000545868 STAC3Q96MF2 364 aa14.08□□□□□ -0.16
GABRB3-205ENST00000545868 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
GABRB3-205ENST00000545868 AKAP12Q02952 1782 aa14.08□□□□□ -0.16
GABRB3-205ENST00000545868 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.16
GABRB3-205ENST00000545868 CAMTA1Q9Y6Y1 1673 aa14.07□□□□□ -0.16
GABRB3-205ENST00000545868 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
GABRB3-205ENST00000545868 COL18A1P39060 1754 aa14.06□□□□□ -0.16
GABRB3-205ENST00000545868 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
GABRB3-205ENST00000545868 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
GABRB3-205ENST00000545868 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
GABRB3-205ENST00000545868 A0A0G2JS52 829 aa14.05□□□□□ -0.16
GABRB3-205ENST00000545868 MYT1Q01538 1121 aa14.05□□□□□ -0.16
GABRB3-205ENST00000545868 CHRNA2Q15822 529 aa14.05□□□□□ -0.16
GABRB3-205ENST00000545868 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
GABRB3-205ENST00000545868 DISP2A7MBM2 1401 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms