RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 SEPT9Q9UHD8 586 aaPredicted RBP9.97□□□□□ -0.81
LDHC-209ENST00000545848 CAMSAP1Q5T5Y3 1602 aa9.96□□□□□ -0.81
LDHC-209ENST00000545848 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.81
LDHC-209ENST00000545848 HSPA2P54652 639 aa9.96□□□□□ -0.82
LDHC-209ENST00000545848 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
LDHC-209ENST00000545848 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
LDHC-209ENST00000545848 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
LDHC-209ENST00000545848 DAPK1P53355 1430 aa9.96□□□□□ -0.82
LDHC-209ENST00000545848 RTEL1-TNFRSF6BF6WH68 1400 aa9.95□□□□□ -0.82
LDHC-209ENST00000545848 MIA2Q96PC5 1412 aa9.95□□□□□ -0.82
LDHC-209ENST00000545848 ABCC3O15438 1527 aa9.94□□□□□ -0.82
LDHC-209ENST00000545848 SHANK2Q9UPX8 1470 aa9.94□□□□□ -0.82
LDHC-209ENST00000545848 CERKQ8TCT0 537 aa9.94□□□□□ -0.82
LDHC-209ENST00000545848 MYO5BQ9ULV0 1848 aa9.93□□□□□ -0.82
LDHC-209ENST00000545848 PRDM15P57071 1507 aaPredicted RBP9.93□□□□□ -0.82
LDHC-209ENST00000545848 BCAMP50895 628 aa9.93□□□□□ -0.82
LDHC-209ENST00000545848 PLCB2Q00722 1185 aa9.93□□□□□ -0.82
LDHC-209ENST00000545848 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
LDHC-209ENST00000545848 PACS2Q86VP3 889 aa9.93□□□□□ -0.82
LDHC-209ENST00000545848 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
LDHC-209ENST00000545848 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
LDHC-209ENST00000545848 KDM5DQ9BY66 1539 aa9.92□□□□□ -0.82
LDHC-209ENST00000545848 SOWAHBA6NEL2 793 aa9.92□□□□□ -0.82
LDHC-209ENST00000545848 ZC3H13Q5T200 1668 aaKnown RBP9.92□□□□□ -0.82
LDHC-209ENST00000545848 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
LDHC-209ENST00000545848 DHX29Q7Z478 1369 aaKnown RBP9.91□□□□□ -0.82
LDHC-209ENST00000545848 PRSS12P56730 875 aa9.91□□□□□ -0.82
LDHC-209ENST00000545848 CEP170BQ9Y4F5 1589 aaPredicted RBP9.91□□□□□ -0.82
LDHC-209ENST00000545848 SETD1BQ9UPS6 1966 aaKnown RBP9.9□□□□□ -0.82
LDHC-209ENST00000545848 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.82
LDHC-209ENST00000545848 ADGRL2O95490 1459 aa9.9□□□□□ -0.83
LDHC-209ENST00000545848 POLR1AO95602 1720 aaPredicted RBP9.9□□□□□ -0.83
LDHC-209ENST00000545848 SYNMO15061 1565 aa9.89□□□□□ -0.83
LDHC-209ENST00000545848 DUOX2Q9NRD8 1548 aa9.89□□□□□ -0.83
LDHC-209ENST00000545848 FAM198AQ9UFP1 575 aa9.89□□□□□ -0.83
LDHC-209ENST00000545848 UNC13BO14795 1591 aa9.88□□□□□ -0.83
LDHC-209ENST00000545848 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
LDHC-209ENST00000545848 UBR1Q8IWV7 1749 aa9.88□□□□□ -0.83
LDHC-209ENST00000545848 MLLT3P42568 568 aaPredicted RBP9.88□□□□□ -0.83
LDHC-209ENST00000545848 SPATA31D1Q6ZQQ2 1576 aa9.88□□□□□ -0.83
LDHC-209ENST00000545848 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
LDHC-209ENST00000545848 E9PCH4 1651 aa9.87□□□□□ -0.83
LDHC-209ENST00000545848 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
LDHC-209ENST00000545848 ZMYM3Q14202 1370 aa9.87□□□□□ -0.83
LDHC-209ENST00000545848 GCC2Q8IWJ2 1684 aa9.87□□□□□ -0.83
LDHC-209ENST00000545848 PZPP20742 1482 aa9.86□□□□□ -0.83
LDHC-209ENST00000545848 PIK3C2BO00750 1634 aa9.86□□□□□ -0.83
LDHC-209ENST00000545848 SMAPO00193 183 aa9.86□□□□□ -0.83
LDHC-209ENST00000545848 NCOA1Q15788 1441 aa9.86□□□□□ -0.83
LDHC-209ENST00000545848 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
LDHC-209ENST00000545848 GGT6Q6P531 493 aa9.86□□□□□ -0.83
LDHC-209ENST00000545848 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.86□□□□□ -0.83
LDHC-209ENST00000545848 CHIC2Q9UKJ5 165 aa9.86□□□□□ -0.83
LDHC-209ENST00000545848 UGGT1Q9NYU2 1555 aa9.85□□□□□ -0.83
LDHC-209ENST00000545848 NBPF26B4DH59 902 aa9.85□□□□□ -0.83
LDHC-209ENST00000545848 KIF3BO15066 747 aa9.85□□□□□ -0.83
LDHC-209ENST00000545848 NPDC1Q9NQX5 325 aaPredicted RBP9.85□□□□□ -0.83
LDHC-209ENST00000545848 WBP1LQ9NX94 342 aa9.85□□□□□ -0.83
LDHC-209ENST00000545848 RBM27Q9P2N5 1060 aaKnown RBP9.85□□□□□ -0.83
LDHC-209ENST00000545848 ERVK-7P63135 1459 aa9.85□□□□□ -0.83
LDHC-209ENST00000545848 CNTLNQ9NXG0 1405 aa9.84□□□□□ -0.83
LDHC-209ENST00000545848 EFCAB6Q5THR3 1501 aa9.84□□□□□ -0.83
LDHC-209ENST00000545848 C3orf80F5H4A9 247 aa9.84□□□□□ -0.83
LDHC-209ENST00000545848 NYAP1Q6ZVC0 841 aa9.84□□□□□ -0.83
LDHC-209ENST00000545848 TATDN2Q93075 761 aa9.84□□□□□ -0.83
LDHC-209ENST00000545848 PNMA3Q9UL41 463 aa9.84□□□□□ -0.83
LDHC-209ENST00000545848 NPATQ14207 1427 aa9.83□□□□□ -0.84
LDHC-209ENST00000545848 UHRF1BP1Q6BDS2 1440 aa9.83□□□□□ -0.84
LDHC-209ENST00000545848 ERBINQ96RT1 1412 aa9.83□□□□□ -0.84
LDHC-209ENST00000545848 IFFO2Q5TF58 517 aa9.83□□□□□ -0.84
LDHC-209ENST00000545848 RRP7BPQ9NSQ0 103 aa9.83□□□□□ -0.84
LDHC-209ENST00000545848 TSR3Q9UJK0 312 aaKnown RBP9.83□□□□□ -0.84
LDHC-209ENST00000545848 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
LDHC-209ENST00000545848 TET3O43151 1660 aa9.83□□□□□ -0.84
LDHC-209ENST00000545848 RRBP1Q9P2E9 1410 aaKnown RBP9.82□□□□□ -0.84
LDHC-209ENST00000545848 FAM135AQ9P2D6 1515 aa9.82□□□□□ -0.84
LDHC-209ENST00000545848 IQGAP3Q86VI3 1631 aa9.82□□□□□ -0.84
LDHC-209ENST00000545848 LTBP4Q8N2S1 1624 aa9.82□□□□□ -0.84
LDHC-209ENST00000545848 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
LDHC-209ENST00000545848 PADI6Q6TGC4 694 aa9.81□□□□□ -0.84
LDHC-209ENST00000545848 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
LDHC-209ENST00000545848 LMTK2Q8IWU2 1503 aa9.81□□□□□ -0.84
LDHC-209ENST00000545848 A2ML1A8K2U0 1454 aa9.8□□□□□ -0.84
LDHC-209ENST00000545848 FAM50AQ14320 339 aaKnown RBP9.8□□□□□ -0.84
LDHC-209ENST00000545848 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
LDHC-209ENST00000545848 TTC13Q8NBP0 860 aa9.8□□□□□ -0.84
LDHC-209ENST00000545848 SEMA3EO15041 775 aa9.79□□□□□ -0.84
LDHC-209ENST00000545848 ITGBL1O95965 494 aaPredicted RBP9.79□□□□□ -0.84
LDHC-209ENST00000545848 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
LDHC-209ENST00000545848 ALKQ9UM73 1620 aa9.78□□□□□ -0.84
LDHC-209ENST00000545848 IQGAP1P46940 1657 aa9.77□□□□□ -0.84
LDHC-209ENST00000545848 TNRQ92752 1358 aa9.77□□□□□ -0.84
LDHC-209ENST00000545848 SPHKAPQ2M3C7 1700 aa9.77□□□□□ -0.85
LDHC-209ENST00000545848 PTGDRQ13258 359 aa9.77□□□□□ -0.85
LDHC-209ENST00000545848 ANKRD50Q9ULJ7 1429 aa9.76□□□□□ -0.85
LDHC-209ENST00000545848 TSPY4P0CV99 314 aa9.76□□□□□ -0.85
LDHC-209ENST00000545848 TSPY10P0CW01 314 aa9.76□□□□□ -0.85
LDHC-209ENST00000545848 PPP4CP60510 307 aa9.76□□□□□ -0.85
LDHC-209ENST00000545848 ANKRD30AQ9BXX3 1397 aa9.75□□□□□ -0.85
LDHC-209ENST00000545848 TMEM131LA2VDJ0 1609 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms