RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ATAD2Q6PL18 1390 aa30.52■■■□□ 2.48
SCARB1-210ENST00000545493 POLR3AO14802 1390 aaPredicted RBP30.51■■■□□ 2.47
SCARB1-210ENST00000545493 COL14A1Q05707 1796 aaKnown RBP30.51■■■□□ 2.47
SCARB1-210ENST00000545493 CENPJQ9HC77 1338 aaPredicted RBP30.5■■■□□ 2.47
SCARB1-210ENST00000545493 BRWD3Q6RI45 1802 aa30.46■■■□□ 2.47
SCARB1-210ENST00000545493 NEUROD1Q13562 356 aa30.44■■■□□ 2.46
SCARB1-210ENST00000545493 FAM83GA6ND36 823 aa30.43■■■□□ 2.46
SCARB1-210ENST00000545493 PAK3O75914 559 aaPredicted RBP30.43■■■□□ 2.46
SCARB1-210ENST00000545493 VPS72Q15906 364 aa30.43■■■□□ 2.46
SCARB1-210ENST00000545493 ACEP12821 1306 aa30.43■■■□□ 2.46
SCARB1-210ENST00000545493 NRKQ7Z2Y5 1582 aa30.42■■■□□ 2.46
SCARB1-210ENST00000545493 PPIP5K1Q6PFW1 1433 aa30.42■■■□□ 2.46
SCARB1-210ENST00000545493 CCDC61Q9Y6R9 512 aa30.42■■■□□ 2.46
SCARB1-210ENST00000545493 PLEKHG3A1L390 1219 aa30.4■■■□□ 2.46
SCARB1-210ENST00000545493 ROCK2O75116 1388 aaKnown RBP30.4■■■□□ 2.46
SCARB1-210ENST00000545493 SRPK2P78362 688 aaKnown RBP30.37■■■□□ 2.45
SCARB1-210ENST00000545493 CABP2Q9NPB3 220 aa30.37■■■□□ 2.45
SCARB1-210ENST00000545493 NBPF8Q3BBV2 869 aa30.36■■■□□ 2.45
SCARB1-210ENST00000545493 BTG4Q9NY30 223 aa30.35■■■□□ 2.45
SCARB1-210ENST00000545493 KIAA0232Q92628 1395 aa30.33■■■□□ 2.45
SCARB1-210ENST00000545493 CCDC9Q9Y3X0 531 aaKnown RBP30.32■■■□□ 2.44
SCARB1-210ENST00000545493 NUTM2GQ5VZR2 741 aa30.31■■■□□ 2.44
SCARB1-210ENST00000545493 SEPT12Q8IYM1 358 aa30.3■■■□□ 2.44
SCARB1-210ENST00000545493 THSD7AQ9UPZ6 1657 aa30.3■■■□□ 2.44
SCARB1-210ENST00000545493 PRDM11Q9NQV5 511 aa30.29■■■□□ 2.44
SCARB1-210ENST00000545493 USP6P35125 1406 aa30.29■■■□□ 2.44
SCARB1-210ENST00000545493 USP19O94966 1318 aa30.28■■■□□ 2.44
SCARB1-210ENST00000545493 LMO7Q8WWI1 1683 aa30.28■■■□□ 2.44
SCARB1-210ENST00000545493 ONECUT3O60422 494 aaPredicted RBP30.28■■■□□ 2.44
SCARB1-210ENST00000545493 PIK3C2AO00443 1686 aa30.27■■■□□ 2.44
SCARB1-210ENST00000545493 AKAP12Q02952 1782 aa30.27■■■□□ 2.44
SCARB1-210ENST00000545493 EVC2Q86UK5 1308 aa30.24■■■□□ 2.43
SCARB1-210ENST00000545493 BRD4O60885 1362 aaPredicted RBP30.24■■■□□ 2.43
SCARB1-210ENST00000545493 TONSLQ96HA7 1378 aa30.24■■■□□ 2.43
SCARB1-210ENST00000545493 SSH2Q76I76 1423 aa30.23■■■□□ 2.43
SCARB1-210ENST00000545493 CHRNA2Q15822 529 aa30.23■■■□□ 2.43
SCARB1-210ENST00000545493 ABTB2Q8N961 1025 aa30.23■■■□□ 2.43
SCARB1-210ENST00000545493 CABP1Q9NZU7 370 aa30.23■■■□□ 2.43
SCARB1-210ENST00000545493 SPATA31A5Q5VU36 1347 aa30.22■■■□□ 2.43
SCARB1-210ENST00000545493 SPATA31A7Q8IWB4 1347 aa30.22■■■□□ 2.43
SCARB1-210ENST00000545493 BLMP54132 1417 aaPredicted RBP30.22■■■□□ 2.43
SCARB1-210ENST00000545493 SLIT3O75094 1523 aa30.22■■■□□ 2.43
SCARB1-210ENST00000545493 FAM98CQ17RN3 349 aaKnown RBP30.22■■■□□ 2.43
SCARB1-210ENST00000545493 CPDO75976 1380 aa30.21■■■□□ 2.43
SCARB1-210ENST00000545493 SBNO2Q9Y2G9 1366 aa30.21■■■□□ 2.43
SCARB1-210ENST00000545493 ZC3H6P61129 1189 aaKnown RBP30.21■■■□□ 2.43
SCARB1-210ENST00000545493 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
SCARB1-210ENST00000545493 CAMTA1Q9Y6Y1 1673 aa30.19■■■□□ 2.42
SCARB1-210ENST00000545493 KRT27Q7Z3Y8 459 aa30.18■■■□□ 2.42
SCARB1-210ENST00000545493 CCDC125Q86Z20 511 aa30.18■■■□□ 2.42
SCARB1-210ENST00000545493 MON2Q7Z3U7 1717 aa30.17■■■□□ 2.42
SCARB1-210ENST00000545493 A0A0G2JS52 829 aa30.16■■■□□ 2.42
SCARB1-210ENST00000545493 MYT1Q01538 1121 aa30.16■■■□□ 2.42
SCARB1-210ENST00000545493 SRCAPQ6ZRS2 3230 aa30.15■■■□□ 2.42
SCARB1-210ENST00000545493 SPATA31A1Q5TZJ5 1347 aa30.15■■■□□ 2.42
SCARB1-210ENST00000545493 CARD11Q9BXL7 1154 aa30.14■■■□□ 2.42
SCARB1-210ENST00000545493 NLRP13Q86W25 1043 aa30.13■■■□□ 2.41
SCARB1-210ENST00000545493 STRN4Q9NRL3 753 aa30.13■■■□□ 2.41
SCARB1-210ENST00000545493 CPSF1Q10570 1443 aaKnown RBP30.12■■■□□ 2.41
SCARB1-210ENST00000545493 COL5A2P05997 1499 aaPredicted RBP30.12■■■□□ 2.41
SCARB1-210ENST00000545493 GCP02774 474 aa30.11■■■□□ 2.41
SCARB1-210ENST00000545493 RGPD1P0DJD0 1748 aa30.1■■■□□ 2.41
SCARB1-210ENST00000545493 COL18A1P39060 1754 aa30.08■■■□□ 2.41
SCARB1-210ENST00000545493 TNS1Q9HBL0 1735 aaKnown RBP30.08■■■□□ 2.41
SCARB1-210ENST00000545493 CD163L1Q9NR16 1453 aa30.08■■■□□ 2.41
SCARB1-210ENST00000545493 USP54Q70EL1 1684 aa30.07■■■□□ 2.4
SCARB1-210ENST00000545493 TTC21BQ7Z4L5 1316 aa30.06■■■□□ 2.4
SCARB1-210ENST00000545493 NLRP6P59044 892 aa30.06■■■□□ 2.4
SCARB1-210ENST00000545493 DEFB132Q7Z7B7 95 aa30.06■■■□□ 2.4
SCARB1-210ENST00000545493 LARP1Q6PKG0 1096 aaKnown RBP30.04■■■□□ 2.4
SCARB1-210ENST00000545493 NFAT5O94916 1531 aa30.04■■■□□ 2.4
SCARB1-210ENST00000545493 KTN1Q86UP2 1357 aaKnown RBP30.03■■■□□ 2.4
SCARB1-210ENST00000545493 PARP4Q9UKK3 1724 aaKnown RBP30.02■■■□□ 2.4
SCARB1-210ENST00000545493 FAM182BQ5T319 152 aa30.02■■■□□ 2.4
SCARB1-210ENST00000545493 ZNF692Q9BU19 519 aaPredicted RBP30.02■■■□□ 2.4
SCARB1-210ENST00000545493 WNK3Q9BYP7 1800 aa30.01■■■□□ 2.4
SCARB1-210ENST00000545493 USP35Q9P2H5 1018 aa30.01■■■□□ 2.39
SCARB1-210ENST00000545493 AATKQ6ZMQ8 1374 aa30.01■■■□□ 2.39
SCARB1-210ENST00000545493 TTC21AQ8NDW8 1320 aa30■■■□□ 2.39
SCARB1-210ENST00000545493 SF3B2Q13435 895 aaKnown RBP30■■■□□ 2.39
SCARB1-210ENST00000545493 EVA1CP58658 441 aa29.99■■■□□ 2.39
SCARB1-210ENST00000545493 BARGINQ6ZT62 677 aa29.99■■■□□ 2.39
SCARB1-210ENST00000545493 CRB1P82279 1406 aa29.97■■■□□ 2.39
SCARB1-210ENST00000545493 ZBTB7CA1YPR0 619 aa29.97■■■□□ 2.39
SCARB1-210ENST00000545493 ZRANB1Q9UGI0 708 aa29.97■■■□□ 2.39
SCARB1-210ENST00000545493 LRRC37A3O60309 1634 aa29.96■■■□□ 2.39
SCARB1-210ENST00000545493 RGPD5Q99666 1765 aa29.96■■■□□ 2.39
SCARB1-210ENST00000545493 TCP11L2Q8N4U5 519 aa29.95■■■□□ 2.39
SCARB1-210ENST00000545493 ABCC6O95255 1503 aa29.94■■■□□ 2.38
SCARB1-210ENST00000545493 DISP2A7MBM2 1401 aa29.94■■■□□ 2.38
SCARB1-210ENST00000545493 TESK2Q96S53 571 aa29.93■■■□□ 2.38
SCARB1-210ENST00000545493 A0A1W2PP64 1363 aa29.92■■■□□ 2.38
SCARB1-210ENST00000545493 USP31Q70CQ4 1352 aa29.91■■■□□ 2.38
SCARB1-210ENST00000545493 ARHGEF25Q86VW2 580 aa29.91■■■□□ 2.38
SCARB1-210ENST00000545493 THRAP3Q9Y2W1 955 aaKnown RBP29.91■■■□□ 2.38
SCARB1-210ENST00000545493 BAG6P46379 1132 aa29.9■■■□□ 2.38
SCARB1-210ENST00000545493 EDC4Q6P2E9 1401 aaKnown RBP29.89■■■□□ 2.38
SCARB1-210ENST00000545493 PEAK1Q9H792 1746 aa29.89■■■□□ 2.38
SCARB1-210ENST00000545493 SOX12O15370 315 aa29.89■■■□□ 2.38
SCARB1-210ENST00000545493 KCNH5Q8NCM2 988 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms