RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 TMEM132EQ6IEE7 984 aa9.57□□□□□ -0.88
CDCA3-209ENST00000544610 GJD4Q96KN9 370 aaPredicted RBP9.57□□□□□ -0.88
CDCA3-209ENST00000544610 TIMELESSQ9UNS1 1208 aa9.57□□□□□ -0.88
CDCA3-209ENST00000544610 GLI3P10071 1580 aa9.57□□□□□ -0.88
CDCA3-209ENST00000544610 RALGAPBQ86X10 1494 aa9.56□□□□□ -0.88
CDCA3-209ENST00000544610 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
CDCA3-209ENST00000544610 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
CDCA3-209ENST00000544610 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
CDCA3-209ENST00000544610 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
CDCA3-209ENST00000544610 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
CDCA3-209ENST00000544610 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
CDCA3-209ENST00000544610 C14orf93Q9H972 538 aaKnown RBP9.54□□□□□ -0.88
CDCA3-209ENST00000544610 ADGRB2O60241 1585 aa9.54□□□□□ -0.88
CDCA3-209ENST00000544610 ABCA3Q99758 1704 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 SBNO1A3KN83 1393 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 DLC1Q96QB1 1528 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 PLCH1Q4KWH8 1693 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 KRT28Q7Z3Y7 464 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 CCER1Q8TC90 406 aaPredicted RBP9.53□□□□□ -0.88
CDCA3-209ENST00000544610 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 PHF8Q9UPP1 1060 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 BLMP54132 1417 aaPredicted RBP9.53□□□□□ -0.88
CDCA3-209ENST00000544610 NWD2Q9ULI1 1742 aa9.53□□□□□ -0.88
CDCA3-209ENST00000544610 ADGRB1O14514 1584 aa9.52□□□□□ -0.89
CDCA3-209ENST00000544610 CFAP70Q5T0N1 1121 aa9.52□□□□□ -0.89
CDCA3-209ENST00000544610 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
CDCA3-209ENST00000544610 ANKARQ7Z5J8 1434 aa9.52□□□□□ -0.89
CDCA3-209ENST00000544610 ARHGEF10O15013 1369 aa9.51□□□□□ -0.89
CDCA3-209ENST00000544610 RGPD8O14715 1765 aaPredicted RBP9.51□□□□□ -0.89
CDCA3-209ENST00000544610 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
CDCA3-209ENST00000544610 PSME1Q06323 249 aa9.51□□□□□ -0.89
CDCA3-209ENST00000544610 VPS72Q15906 364 aa9.51□□□□□ -0.89
CDCA3-209ENST00000544610 PRAM1Q96QH2 718 aa9.51□□□□□ -0.89
CDCA3-209ENST00000544610 TRPM3Q9HCF6 1732 aaPredicted RBP9.5□□□□□ -0.89
CDCA3-209ENST00000544610 BRWD3Q6RI45 1802 aa9.49□□□□□ -0.89
CDCA3-209ENST00000544610 NRAPQ86VF7 1730 aa9.49□□□□□ -0.89
CDCA3-209ENST00000544610 ONECUT3O60422 494 aaPredicted RBP9.49□□□□□ -0.89
CDCA3-209ENST00000544610 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
CDCA3-209ENST00000544610 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
CDCA3-209ENST00000544610 CABLES1Q8TDN4 633 aa9.49□□□□□ -0.89
CDCA3-209ENST00000544610 TULP4Q9NRJ4 1543 aa9.48□□□□□ -0.89
CDCA3-209ENST00000544610 SAFB2Q14151 953 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDCA3-209ENST00000544610 ALS2Q96Q42 1657 aa9.48□□□□□ -0.89
CDCA3-209ENST00000544610 FAM83GA6ND36 823 aa9.47□□□□□ -0.89
CDCA3-209ENST00000544610 PMFBP1Q8TBY8 1022 aa9.47□□□□□ -0.89
CDCA3-209ENST00000544610 POGKQ9P215 609 aa9.47□□□□□ -0.89
CDCA3-209ENST00000544610 EIF3AQ14152 1382 aaKnown RBP9.47□□□□□ -0.89
CDCA3-209ENST00000544610 CRYBG1Q9Y4K1 1723 aa9.46□□□□□ -0.89
CDCA3-209ENST00000544610 COL14A1Q05707 1796 aaKnown RBP9.46□□□□□ -0.9
CDCA3-209ENST00000544610 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
CDCA3-209ENST00000544610 KRT27Q7Z3Y8 459 aa9.46□□□□□ -0.9
CDCA3-209ENST00000544610 DEFB132Q7Z7B7 95 aa9.46□□□□□ -0.9
CDCA3-209ENST00000544610 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
CDCA3-209ENST00000544610 SF3B2Q13435 895 aaKnown RBP9.45□□□□□ -0.9
CDCA3-209ENST00000544610 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
CDCA3-209ENST00000544610 CCDC9Q9Y3X0 531 aaKnown RBP9.45□□□□□ -0.9
CDCA3-209ENST00000544610 PRR36Q9H6K5 1346 aa9.45□□□□□ -0.9
CDCA3-209ENST00000544610 GPRASP1Q5JY77 1395 aa9.45□□□□□ -0.9
CDCA3-209ENST00000544610 LRP5O75197 1615 aa9.45□□□□□ -0.9
CDCA3-209ENST00000544610 HIRIP3Q9BW71 556 aaPredicted RBP9.44□□□□□ -0.9
CDCA3-209ENST00000544610 BTG4Q9NY30 223 aa9.44□□□□□ -0.9
CDCA3-209ENST00000544610 TRAK1Q9UPV9 953 aa9.44□□□□□ -0.9
CDCA3-209ENST00000544610 THSD7AQ9UPZ6 1657 aa9.43□□□□□ -0.9
CDCA3-209ENST00000544610 ATP7BP35670 1465 aa9.43□□□□□ -0.9
CDCA3-209ENST00000544610 MINK1Q8N4C8 1332 aaPredicted RBP9.43□□□□□ -0.9
CDCA3-209ENST00000544610 SPDYE4A6NLX3 237 aa9.43□□□□□ -0.9
CDCA3-209ENST00000544610 WASLO00401 505 aaPredicted RBP9.43□□□□□ -0.9
CDCA3-209ENST00000544610 ARHGEF28Q8N1W1 1705 aaKnown RBP9.42□□□□□ -0.9
CDCA3-209ENST00000544610 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
CDCA3-209ENST00000544610 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
CDCA3-209ENST00000544610 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
CDCA3-209ENST00000544610 DISP2A7MBM2 1401 aa9.41□□□□□ -0.9
CDCA3-209ENST00000544610 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
CDCA3-209ENST00000544610 SPATA31A7Q8IWB4 1347 aa9.41□□□□□ -0.9
CDCA3-209ENST00000544610 A0A0G2JS52 829 aa9.41□□□□□ -0.9
CDCA3-209ENST00000544610 BAG6P46379 1132 aa9.41□□□□□ -0.9
CDCA3-209ENST00000544610 MYT1Q01538 1121 aa9.41□□□□□ -0.9
CDCA3-209ENST00000544610 DCAF11Q8TEB1 546 aa9.41□□□□□ -0.9
CDCA3-209ENST00000544610 PHRF1Q9P1Y6 1649 aaKnown RBP9.41□□□□□ -0.9
CDCA3-209ENST00000544610 TNS1Q9HBL0 1735 aaKnown RBP9.4□□□□□ -0.9
CDCA3-209ENST00000544610 TOPAZ1Q8N9V7 1692 aa9.4□□□□□ -0.9
CDCA3-209ENST00000544610 CLCN6P51797 869 aa9.4□□□□□ -0.9
CDCA3-209ENST00000544610 NGDNQ8NEJ9 315 aaKnown RBP9.4□□□□□ -0.9
CDCA3-209ENST00000544610 KDM2AQ9Y2K7 1162 aa9.4□□□□□ -0.9
CDCA3-209ENST00000544610 KIAA0232Q92628 1395 aa9.39□□□□□ -0.91
CDCA3-209ENST00000544610 PAK3O75914 559 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-209ENST00000544610 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-209ENST00000544610 PRDM11Q9NQV5 511 aa9.39□□□□□ -0.91
CDCA3-209ENST00000544610 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-209ENST00000544610 SPATA31A1Q5TZJ5 1347 aa9.38□□□□□ -0.91
CDCA3-209ENST00000544610 NUDT16Q96DE0 195 aaKnown RBP9.38□□□□□ -0.91
CDCA3-209ENST00000544610 OTUD5Q96G74 571 aa9.38□□□□□ -0.91
CDCA3-209ENST00000544610 NRKQ7Z2Y5 1582 aa9.37□□□□□ -0.91
CDCA3-209ENST00000544610 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
CDCA3-209ENST00000544610 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
CDCA3-209ENST00000544610 FAM182BQ5T319 152 aa9.37□□□□□ -0.91
CDCA3-209ENST00000544610 TONSLQ96HA7 1378 aa9.37□□□□□ -0.91
CDCA3-209ENST00000544610 KIAA1210Q9ULL0 1709 aa9.36□□□□□ -0.91
CDCA3-209ENST00000544610 CHRNA2Q15822 529 aa9.36□□□□□ -0.91
CDCA3-209ENST00000544610 SSH2Q76I76 1423 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms