RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 DCAF8L1A6NGE4 600 aa7.93□□□□□ -1.14
CLSTN3-215ENST00000544584 KRT27Q7Z3Y8 459 aa7.93□□□□□ -1.14
CLSTN3-215ENST00000544584 UNC5CLQ8IV45 518 aa7.93□□□□□ -1.14
CLSTN3-215ENST00000544584 SEPT12Q8IYM1 358 aa7.93□□□□□ -1.14
CLSTN3-215ENST00000544584 HIRIP3Q9BW71 556 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-215ENST00000544584 CCDC61Q9Y6R9 512 aa7.93□□□□□ -1.14
CLSTN3-215ENST00000544584 PLEKHH1Q9ULM0 1364 aa7.93□□□□□ -1.14
CLSTN3-215ENST00000544584 USP32Q8NFA0 1604 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 PLCH1Q4KWH8 1693 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 NUP188Q5SRE5 1749 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 EN1Q05925 392 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 SIN3AQ96ST3 1273 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 CDK19Q9BWU1 502 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 SBNO1A3KN83 1393 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 ADGRB1O14514 1584 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 ADGRB2O60241 1585 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 KIF1AQ12756 1690 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 KIAA1210Q9ULL0 1709 aa7.92□□□□□ -1.14
CLSTN3-215ENST00000544584 PAK3O75914 559 aaPredicted RBP7.91□□□□□ -1.14
CLSTN3-215ENST00000544584 PMFBP1Q8TBY8 1022 aa7.91□□□□□ -1.14
CLSTN3-215ENST00000544584 NUDT16Q96DE0 195 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-215ENST00000544584 CARD11Q9BXL7 1154 aa7.91□□□□□ -1.14
CLSTN3-215ENST00000544584 SPATA31A3Q5VYP0 1347 aa7.91□□□□□ -1.14
CLSTN3-215ENST00000544584 PXDNQ92626 1479 aa7.91□□□□□ -1.14
CLSTN3-215ENST00000544584 BRD4O60885 1362 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-215ENST00000544584 NBPF1Q3BBV0 1214 aa7.9□□□□□ -1.14
CLSTN3-215ENST00000544584 ZNF692Q9BU19 519 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-215ENST00000544584 TULP4Q9NRJ4 1543 aa7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 TNS3Q68CZ2 1445 aa7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 PARD3Q8TEW0 1356 aa7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 PLEKHG3A1L390 1219 aa7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 XPCQ01831 940 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 VPS72Q15906 364 aa7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 CDCA8Q53HL2 280 aa7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 PCGF6Q9BYE7 350 aa7.89□□□□□ -1.15
CLSTN3-215ENST00000544584 NRAPQ86VF7 1730 aa7.88□□□□□ -1.15
CLSTN3-215ENST00000544584 FMN2Q9NZ56 1722 aa7.88□□□□□ -1.15
CLSTN3-215ENST00000544584 ABCA3Q99758 1704 aa7.87□□□□□ -1.15
CLSTN3-215ENST00000544584 NBPF8Q3BBV2 869 aa7.87□□□□□ -1.15
CLSTN3-215ENST00000544584 NLRP13Q86W25 1043 aa7.87□□□□□ -1.15
CLSTN3-215ENST00000544584 CCER1Q8TC90 406 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-215ENST00000544584 PUS7Q96PZ0 661 aaKnown RBP7.87□□□□□ -1.15
CLSTN3-215ENST00000544584 CAMKK2Q96RR4 588 aa7.87□□□□□ -1.15
CLSTN3-215ENST00000544584 SPON1Q9HCB6 807 aa7.87□□□□□ -1.15
CLSTN3-215ENST00000544584 THSD7AQ9UPZ6 1657 aa7.86□□□□□ -1.15
CLSTN3-215ENST00000544584 EZH2Q15910 746 aaKnown RBP7.86□□□□□ -1.15
CLSTN3-215ENST00000544584 HDGFL2Q7Z4V5 671 aaPredicted RBP7.86□□□□□ -1.15
CLSTN3-215ENST00000544584 ABTB2Q8N961 1025 aa7.86□□□□□ -1.15
CLSTN3-215ENST00000544584 PPP1R1BQ9UD71 204 aaPredicted RBP7.86□□□□□ -1.15
CLSTN3-215ENST00000544584 CASZ1Q86V15 1759 aa7.86□□□□□ -1.15
CLSTN3-215ENST00000544584 NRKQ7Z2Y5 1582 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 ACEP12821 1306 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 KCNQ2O43526 872 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 CABP2Q9NPB3 220 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 PRDM11Q9NQV5 511 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 TERF2IPQ9NYB0 399 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 CCDC9Q9Y3X0 531 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 ITSN1Q15811 1721 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 ATP7BP35670 1465 aa7.85□□□□□ -1.15
CLSTN3-215ENST00000544584 POLR3AO14802 1390 aaPredicted RBP7.84□□□□□ -1.15
CLSTN3-215ENST00000544584 SBNO2Q9Y2G9 1366 aa7.84□□□□□ -1.15
CLSTN3-215ENST00000544584 MYOM1P52179 1685 aa7.84□□□□□ -1.15
CLSTN3-215ENST00000544584 EVA1CP58658 441 aa7.84□□□□□ -1.15
CLSTN3-215ENST00000544584 CABP1Q9NZU7 370 aa7.84□□□□□ -1.15
CLSTN3-215ENST00000544584 PPIP5K1Q6PFW1 1433 aa7.84□□□□□ -1.15
CLSTN3-215ENST00000544584 ARHGEF28Q8N1W1 1705 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 TTC21AQ8NDW8 1320 aa7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 PRR36Q9H6K5 1346 aa7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 GIGYF1O75420 1035 aaPredicted RBP7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 PLEKHG5O94827 1062 aa7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 TMF1P82094 1093 aa7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 KCNH5Q8NCM2 988 aa7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 TMC1Q8TDI8 760 aa7.83□□□□□ -1.16
CLSTN3-215ENST00000544584 RGPD3A6NKT7 1758 aaPredicted RBP7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 RGPD4Q7Z3J3 1758 aa7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 A0A0G2JS52 829 aa7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 C11orf95C9JLR9 678 aaPredicted RBP7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 SLC34A2O95436 690 aa7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 NLRP6P59044 892 aa7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 MYT1Q01538 1121 aa7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 SHANK3Q9BYB0 1731 aa7.82□□□□□ -1.16
CLSTN3-215ENST00000544584 CABLES1Q8TDN4 633 aa7.81□□□□□ -1.16
CLSTN3-215ENST00000544584 BTG4Q9NY30 223 aa7.81□□□□□ -1.16
CLSTN3-215ENST00000544584 TRPM1Q7Z4N2 1603 aa7.81□□□□□ -1.16
CLSTN3-215ENST00000544584 FAM83GA6ND36 823 aa7.8□□□□□ -1.16
CLSTN3-215ENST00000544584 GCP02774 474 aa7.8□□□□□ -1.16
CLSTN3-215ENST00000544584 KTN1Q86UP2 1357 aaKnown RBP7.8□□□□□ -1.16
CLSTN3-215ENST00000544584 QRICH2Q9H0J4 1663 aa7.79□□□□□ -1.16
CLSTN3-215ENST00000544584 ST20-MTHFSA0A0A6YYL1 179 aa7.79□□□□□ -1.16
CLSTN3-215ENST00000544584 FAM98CQ17RN3 349 aaKnown RBP7.79□□□□□ -1.16
CLSTN3-215ENST00000544584 FAM182BQ5T319 152 aa7.79□□□□□ -1.16
CLSTN3-215ENST00000544584 NBPF14Q5TI25 921 aa7.79□□□□□ -1.16
CLSTN3-215ENST00000544584 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
CLSTN3-215ENST00000544584 RGPD8O14715 1765 aaPredicted RBP7.79□□□□□ -1.16
CLSTN3-215ENST00000544584 USP6P35125 1406 aa7.78□□□□□ -1.16
CLSTN3-215ENST00000544584 ZC3H6P61129 1189 aaKnown RBP7.78□□□□□ -1.16
CLSTN3-215ENST00000544584 THRAP3Q9Y2W1 955 aaKnown RBP7.78□□□□□ -1.16
CLSTN3-215ENST00000544584 CPDO75976 1380 aa7.78□□□□□ -1.16
CLSTN3-215ENST00000544584 COL14A1Q05707 1796 aaKnown RBP7.78□□□□□ -1.16
CLSTN3-215ENST00000544584 TTC21BQ7Z4L5 1316 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms