RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
DDX47-211ENST00000544497 FDX1P10109 184 aa11.27□□□□□ -0.61
DDX47-211ENST00000544497 PTCRAQ6ISU1 281 aaPredicted RBP11.27□□□□□ -0.61
DDX47-211ENST00000544497 INSM1Q01101 510 aaPredicted RBP11.26□□□□□ -0.61
DDX47-211ENST00000544497 EHBP1Q8NDI1 1231 aa11.26□□□□□ -0.61
DDX47-211ENST00000544497 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
DDX47-211ENST00000544497 SIAH2O43255 324 aa11.25□□□□□ -0.61
DDX47-211ENST00000544497 LCE2CQ5TA81 110 aa11.25□□□□□ -0.61
DDX47-211ENST00000544497 PCDHGC3Q9UN70 934 aa11.25□□□□□ -0.61
DDX47-211ENST00000544497 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
DDX47-211ENST00000544497 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
DDX47-211ENST00000544497 CCNYL3P0C7X3 344 aa11.23□□□□□ -0.61
DDX47-211ENST00000544497 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
DDX47-211ENST00000544497 TBC1D2Q9BYX2 928 aa11.22□□□□□ -0.61
DDX47-211ENST00000544497 CLK2P49760 499 aaKnown RBP11.21□□□□□ -0.61
DDX47-211ENST00000544497 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
DDX47-211ENST00000544497 WASF2Q9Y6W5 498 aa11.21□□□□□ -0.61
DDX47-211ENST00000544497 SH3BP2P78314 561 aa11.2□□□□□ -0.62
DDX47-211ENST00000544497 PTPRNQ16849 979 aa11.2□□□□□ -0.62
DDX47-211ENST00000544497 SPIRE2Q8WWL2 714 aa11.2□□□□□ -0.62
DDX47-211ENST00000544497 UBTFP17480 764 aaKnown RBP11.19□□□□□ -0.62
DDX47-211ENST00000544497 CAPN5O15484 640 aaPredicted RBP11.18□□□□□ -0.62
DDX47-211ENST00000544497 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
DDX47-211ENST00000544497 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
DDX47-211ENST00000544497 BMP1P13497 986 aa11.17□□□□□ -0.62
DDX47-211ENST00000544497 MCM6Q14566 821 aa11.17□□□□□ -0.62
DDX47-211ENST00000544497 EVA1BQ9NVM1 165 aa11.17□□□□□ -0.62
DDX47-211ENST00000544497 NDUFV2P19404 249 aa11.16□□□□□ -0.62
DDX47-211ENST00000544497 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
DDX47-211ENST00000544497 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
DDX47-211ENST00000544497 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
DDX47-211ENST00000544497 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
DDX47-211ENST00000544497 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
DDX47-211ENST00000544497 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
DDX47-211ENST00000544497 KCNH2Q12809 1159 aa11.14□□□□□ -0.63
DDX47-211ENST00000544497 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
DDX47-211ENST00000544497 ARID3AQ99856 593 aa11.14□□□□□ -0.63
DDX47-211ENST00000544497 ARID3CA6NKF2 412 aa11.13□□□□□ -0.63
DDX47-211ENST00000544497 MTMR2Q13614 643 aa11.13□□□□□ -0.63
DDX47-211ENST00000544497 DESI1Q6ICB0 168 aa11.13□□□□□ -0.63
DDX47-211ENST00000544497 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
DDX47-211ENST00000544497 BAP1Q92560 729 aa11.13□□□□□ -0.63
DDX47-211ENST00000544497 LIMD1Q9UGP4 676 aa11.13□□□□□ -0.63
DDX47-211ENST00000544497 TLL2Q9Y6L7 1015 aa11.13□□□□□ -0.63
DDX47-211ENST00000544497 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
DDX47-211ENST00000544497 ZNF511Q8NB15 262 aa11.12□□□□□ -0.63
DDX47-211ENST00000544497 APBB1O00213 710 aa11.11□□□□□ -0.63
DDX47-211ENST00000544497 VARSP26640 1264 aaKnown RBP11.11□□□□□ -0.63
DDX47-211ENST00000544497 NPAS3Q8IXF0 933 aa11.11□□□□□ -0.63
DDX47-211ENST00000544497 A6NJR5 290 aa11.1□□□□□ -0.63
DDX47-211ENST00000544497 RFC5P40937 340 aa11.1□□□□□ -0.63
DDX47-211ENST00000544497 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
DDX47-211ENST00000544497 MPNDQ8N594 471 aa11.1□□□□□ -0.63
DDX47-211ENST00000544497 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
DDX47-211ENST00000544497 RAD21O60216 631 aa11.08□□□□□ -0.64
DDX47-211ENST00000544497 NNTQ13423 1086 aa11.08□□□□□ -0.64
DDX47-211ENST00000544497 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
DDX47-211ENST00000544497 GJA5P36382 358 aa11.07□□□□□ -0.64
DDX47-211ENST00000544497 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
DDX47-211ENST00000544497 IRF7Q92985 503 aa11.07□□□□□ -0.64
DDX47-211ENST00000544497 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
DDX47-211ENST00000544497 SPTLC1O15269 473 aa11.06□□□□□ -0.64
DDX47-211ENST00000544497 TRAK2O60296 914 aa11.06□□□□□ -0.64
DDX47-211ENST00000544497 GMPRP36959 345 aa11.06□□□□□ -0.64
DDX47-211ENST00000544497 TMEM259Q4ZIN3 620 aa11.06□□□□□ -0.64
DDX47-211ENST00000544497 H3BM21 787 aa11.05□□□□□ -0.64
DDX47-211ENST00000544497 BANK1Q8NDB2 785 aa11.05□□□□□ -0.64
DDX47-211ENST00000544497 CTHP32929 405 aa11.04□□□□□ -0.64
DDX47-211ENST00000544497 FBXO31Q5XUX0 539 aaPredicted RBP11.04□□□□□ -0.64
DDX47-211ENST00000544497 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
DDX47-211ENST00000544497 LYPD8Q6UX82 237 aa11.04□□□□□ -0.64
DDX47-211ENST00000544497 PROSER2Q86WR7 435 aaPredicted RBP11.04□□□□□ -0.64
DDX47-211ENST00000544497 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
DDX47-211ENST00000544497 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
DDX47-211ENST00000544497 FAM181BA6NEQ2 426 aa11.03□□□□□ -0.64
DDX47-211ENST00000544497 ADH1CP00326 375 aa11.03□□□□□ -0.64
DDX47-211ENST00000544497 TIMP2P16035 220 aa11.03□□□□□ -0.64
DDX47-211ENST00000544497 VEGFBP49765 207 aa11.03□□□□□ -0.64
DDX47-211ENST00000544497 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
DDX47-211ENST00000544497 MRPL14Q6P1L8 145 aaKnown RBP11.03□□□□□ -0.64
DDX47-211ENST00000544497 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
DDX47-211ENST00000544497 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
DDX47-211ENST00000544497 NUTM2DQ5VT03 806 aaPredicted RBP11.02□□□□□ -0.65
DDX47-211ENST00000544497 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
DDX47-211ENST00000544497 FAM174AQ8TBP5 190 aa11.02□□□□□ -0.65
DDX47-211ENST00000544497 WDR4P57081 412 aaKnown RBP11.01□□□□□ -0.65
DDX47-211ENST00000544497 SCARF1Q14162 830 aa11.01□□□□□ -0.65
DDX47-211ENST00000544497 QPCTQ16769 361 aa11.01□□□□□ -0.65
DDX47-211ENST00000544497 CFAP99D6REC4 459 aa11□□□□□ -0.65
DDX47-211ENST00000544497 LORP23490 312 aaPredicted RBP11□□□□□ -0.65
DDX47-211ENST00000544497 ZSCAN1Q8NBB4 408 aa11□□□□□ -0.65
DDX47-211ENST00000544497 ZBTB3Q9H5J0 574 aa11□□□□□ -0.65
DDX47-211ENST00000544497 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
DDX47-211ENST00000544497 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
DDX47-211ENST00000544497 CDK15Q96Q40 435 aa10.99□□□□□ -0.65
DDX47-211ENST00000544497 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
DDX47-211ENST00000544497 KLF16Q9BXK1 252 aaPredicted RBP10.99□□□□□ -0.65
DDX47-211ENST00000544497 MAP10Q9P2G4 905 aa10.99□□□□□ -0.65
DDX47-211ENST00000544497 COG6Q9Y2V7 657 aa10.99□□□□□ -0.65
DDX47-211ENST00000544497 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms