RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 NBPF1Q3BBV0 1214 aa15.21■□□□□ 0.03
LMO3-230ENST00000544276 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
LMO3-230ENST00000544276 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
LMO3-230ENST00000544276 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
LMO3-230ENST00000544276 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
LMO3-230ENST00000544276 NBPF8Q3BBV2 869 aa15.2■□□□□ 0.02
LMO3-230ENST00000544276 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
LMO3-230ENST00000544276 ACEP12821 1306 aa15.19■□□□□ 0.02
LMO3-230ENST00000544276 PRDM11Q9NQV5 511 aa15.18■□□□□ 0.02
LMO3-230ENST00000544276 PLCH1Q4KWH8 1693 aa15.18■□□□□ 0.02
LMO3-230ENST00000544276 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
LMO3-230ENST00000544276 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
LMO3-230ENST00000544276 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
LMO3-230ENST00000544276 COL14A1Q05707 1796 aaKnown RBP15.17■□□□□ 0.02
LMO3-230ENST00000544276 BRD4O60885 1362 aaPredicted RBP15.17■□□□□ 0.02
LMO3-230ENST00000544276 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
LMO3-230ENST00000544276 FAM98CQ17RN3 349 aaKnown RBP15.16■□□□□ 0.02
LMO3-230ENST00000544276 L3MBTL2Q969R5 705 aa15.16■□□□□ 0.02
LMO3-230ENST00000544276 ITSN1Q15811 1721 aa15.15■□□□□ 0.02
LMO3-230ENST00000544276 KIAA0232Q92628 1395 aa15.15■□□□□ 0.02
LMO3-230ENST00000544276 NRAPQ86VF7 1730 aa15.14■□□□□ 0.01
LMO3-230ENST00000544276 SRPK2P78362 688 aaKnown RBP15.14■□□□□ 0.01
LMO3-230ENST00000544276 USP19O94966 1318 aa15.14■□□□□ 0.01
LMO3-230ENST00000544276 CPDO75976 1380 aa15.13■□□□□ 0.01
LMO3-230ENST00000544276 ABTB2Q8N961 1025 aa15.13■□□□□ 0.01
LMO3-230ENST00000544276 CRYBG1Q9Y4K1 1723 aa15.13■□□□□ 0.01
LMO3-230ENST00000544276 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
LMO3-230ENST00000544276 TOPAZ1Q8N9V7 1692 aa15.12■□□□□ 0.01
LMO3-230ENST00000544276 PPIP5K1Q6PFW1 1433 aa15.12■□□□□ 0.01
LMO3-230ENST00000544276 A0A0G2JS52 829 aa15.12■□□□□ 0.01
LMO3-230ENST00000544276 MYT1Q01538 1121 aa15.12■□□□□ 0.01
LMO3-230ENST00000544276 DEFB132Q7Z7B7 95 aa15.12■□□□□ 0.01
LMO3-230ENST00000544276 ZC3H6P61129 1189 aaKnown RBP15.11■□□□□ 0.01
LMO3-230ENST00000544276 NLRP13Q86W25 1043 aa15.11■□□□□ 0.01
LMO3-230ENST00000544276 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
LMO3-230ENST00000544276 BAG6P46379 1132 aa15.1■□□□□ 0.01
LMO3-230ENST00000544276 CHRNA2Q15822 529 aa15.1■□□□□ 0.01
LMO3-230ENST00000544276 NUTM2GQ5VZR2 741 aa15.1■□□□□ 0.01
LMO3-230ENST00000544276 GCP02774 474 aa15.09■□□□□ 0.01
LMO3-230ENST00000544276 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
LMO3-230ENST00000544276 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
LMO3-230ENST00000544276 EVC2Q86UK5 1308 aa15.09■□□□□ 0.01
LMO3-230ENST00000544276 BRWD3Q6RI45 1802 aa15.08■□□□□ 0.01
LMO3-230ENST00000544276 CABP1Q9NZU7 370 aa15.08■□□□□ 0
LMO3-230ENST00000544276 USP6P35125 1406 aa15.08■□□□□ 0
LMO3-230ENST00000544276 SSH2Q76I76 1423 aa15.08■□□□□ 0
LMO3-230ENST00000544276 THSD7AQ9UPZ6 1657 aa15.07■□□□□ 0
LMO3-230ENST00000544276 EVA1CP58658 441 aa15.07■□□□□ 0
LMO3-230ENST00000544276 STRN4Q9NRL3 753 aa15.07■□□□□ 0
LMO3-230ENST00000544276 THRAP3Q9Y2W1 955 aaKnown RBP15.07■□□□□ 0
LMO3-230ENST00000544276 ROCK2O75116 1388 aaKnown RBP15.07■□□□□ 0
LMO3-230ENST00000544276 DISP2A7MBM2 1401 aa15.07■□□□□ 0
LMO3-230ENST00000544276 PHRF1Q9P1Y6 1649 aaKnown RBP15.06■□□□□ 0
LMO3-230ENST00000544276 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
LMO3-230ENST00000544276 NRKQ7Z2Y5 1582 aa15.06■□□□□ 0
LMO3-230ENST00000544276 NEUROD1Q13562 356 aa15.05■□□□□ -0
LMO3-230ENST00000544276 FAM196AQ6ZSG2 479 aa15.05■□□□□ -0
LMO3-230ENST00000544276 CAMTA1Q9Y6Y1 1673 aa15.04■□□□□ -0
LMO3-230ENST00000544276 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
LMO3-230ENST00000544276 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
LMO3-230ENST00000544276 AATKQ6ZMQ8 1374 aa15.03■□□□□ -0
LMO3-230ENST00000544276 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
LMO3-230ENST00000544276 NLRP6P59044 892 aa15.03■□□□□ -0
LMO3-230ENST00000544276 TRPM1Q7Z4N2 1603 aa15.03■□□□□ -0
LMO3-230ENST00000544276 FAM182BQ5T319 152 aa15.02■□□□□ -0
LMO3-230ENST00000544276 LMO7Q8WWI1 1683 aa15.02□□□□□ -0.01
LMO3-230ENST00000544276 QRICH2Q9H0J4 1663 aa15.02□□□□□ -0.01
LMO3-230ENST00000544276 SLIT3O75094 1523 aa15.02□□□□□ -0.01
LMO3-230ENST00000544276 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
LMO3-230ENST00000544276 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
LMO3-230ENST00000544276 EN1Q05925 392 aaPredicted RBP15.01□□□□□ -0.01
LMO3-230ENST00000544276 PDE3BQ13370 1112 aa15.01□□□□□ -0.01
LMO3-230ENST00000544276 USP35Q9P2H5 1018 aa15.01□□□□□ -0.01
LMO3-230ENST00000544276 PARD3Q8TEW0 1356 aa15□□□□□ -0.01
LMO3-230ENST00000544276 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
LMO3-230ENST00000544276 CRB1P82279 1406 aa15□□□□□ -0.01
LMO3-230ENST00000544276 CPSF1Q10570 1443 aaKnown RBP15□□□□□ -0.01
LMO3-230ENST00000544276 TTC21BQ7Z4L5 1316 aa14.99□□□□□ -0.01
LMO3-230ENST00000544276 KCNH5Q8NCM2 988 aa14.99□□□□□ -0.01
LMO3-230ENST00000544276 CAMKK2Q96RR4 588 aa14.99□□□□□ -0.01
LMO3-230ENST00000544276 TRIM37O94972 964 aa14.98□□□□□ -0.01
LMO3-230ENST00000544276 ARHGEF25Q86VW2 580 aa14.98□□□□□ -0.01
LMO3-230ENST00000544276 RGPD1P0DJD0 1748 aa14.97□□□□□ -0.01
LMO3-230ENST00000544276 EZH2Q15910 746 aaKnown RBP14.96□□□□□ -0.01
LMO3-230ENST00000544276 PUS7Q96PZ0 661 aaKnown RBP14.96□□□□□ -0.01
LMO3-230ENST00000544276 CARD11Q9BXL7 1154 aa14.96□□□□□ -0.01
LMO3-230ENST00000544276 WDR17Q8IZU2 1322 aa14.95□□□□□ -0.02
LMO3-230ENST00000544276 APBA3O96018 575 aa14.95□□□□□ -0.02
LMO3-230ENST00000544276 CDCA7Q9BWT1 371 aaPredicted RBP14.95□□□□□ -0.02
LMO3-230ENST00000544276 KTN1Q86UP2 1357 aaKnown RBP14.95□□□□□ -0.02
LMO3-230ENST00000544276 AXIN2Q9Y2T1 843 aa14.94□□□□□ -0.02
LMO3-230ENST00000544276 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
LMO3-230ENST00000544276 PSDA5PKW4 1024 aaPredicted RBP14.93□□□□□ -0.02
LMO3-230ENST00000544276 TOM1L2Q6ZVM7 507 aa14.93□□□□□ -0.02
LMO3-230ENST00000544276 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
LMO3-230ENST00000544276 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
LMO3-230ENST00000544276 LRP5O75197 1615 aa14.92□□□□□ -0.02
LMO3-230ENST00000544276 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
LMO3-230ENST00000544276 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
LMO3-230ENST00000544276 CARD10Q9BWT7 1032 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms