RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MON2Q7Z3U7 1717 aa22.3■■□□□ 1.16
PTPRO-209ENST00000543886 U2SURPO15042 1029 aaKnown RBP22.3■■□□□ 1.16
PTPRO-209ENST00000543886 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
PTPRO-209ENST00000543886 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
PTPRO-209ENST00000543886 SLC26A8Q96RN1 970 aa22.29■■□□□ 1.16
PTPRO-209ENST00000543886 AKAP12Q02952 1782 aa22.29■■□□□ 1.16
PTPRO-209ENST00000543886 ANP32EQ9BTT0 268 aa22.29■■□□□ 1.16
PTPRO-209ENST00000543886 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.29■■□□□ 1.16
PTPRO-209ENST00000543886 CCDC27Q2M243 656 aa22.28■■□□□ 1.16
PTPRO-209ENST00000543886 CRBNQ96SW2 442 aa22.28■■□□□ 1.16
PTPRO-209ENST00000543886 DIP2AQ14689 1571 aa22.27■■□□□ 1.16
PTPRO-209ENST00000543886 NCBP3Q53F19 620 aaKnown RBP22.27■■□□□ 1.16
PTPRO-209ENST00000543886 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
PTPRO-209ENST00000543886 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
PTPRO-209ENST00000543886 PTPRUQ92729 1446 aa22.27■■□□□ 1.15
PTPRO-209ENST00000543886 DIAPH1O60610 1272 aaKnown RBP22.26■■□□□ 1.15
PTPRO-209ENST00000543886 PNPLA6Q8IY17 1366 aa22.26■■□□□ 1.15
PTPRO-209ENST00000543886 TBX22Q9Y458 520 aa22.26■■□□□ 1.15
PTPRO-209ENST00000543886 NCKAP5LQ9HCH0 1330 aa22.25■■□□□ 1.15
PTPRO-209ENST00000543886 PRR36Q9H6K5 1346 aa22.24■■□□□ 1.15
PTPRO-209ENST00000543886 RIMS1Q86UR5 1692 aaKnown RBP22.24■■□□□ 1.15
PTPRO-209ENST00000543886 TOPAZ1Q8N9V7 1692 aa22.24■■□□□ 1.15
PTPRO-209ENST00000543886 MAPK8IP3Q9UPT6 1336 aa22.24■■□□□ 1.15
PTPRO-209ENST00000543886 NME9Q86XW9 330 aa22.24■■□□□ 1.15
PTPRO-209ENST00000543886 ZNF692Q9BU19 519 aaPredicted RBP22.24■■□□□ 1.15
PTPRO-209ENST00000543886 CEP170BQ9Y4F5 1589 aaPredicted RBP22.23■■□□□ 1.15
PTPRO-209ENST00000543886 C20orf194Q5TEA3 1177 aa22.23■■□□□ 1.15
PTPRO-209ENST00000543886 PNNQ9H307 717 aaKnown RBP22.22■■□□□ 1.15
PTPRO-209ENST00000543886 AMOTL2Q9Y2J4 779 aa22.22■■□□□ 1.15
PTPRO-209ENST00000543886 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
PTPRO-209ENST00000543886 MAP2P11137 1827 aaKnown RBP22.22■■□□□ 1.15
PTPRO-209ENST00000543886 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
PTPRO-209ENST00000543886 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
PTPRO-209ENST00000543886 PLEKHF1Q96S99 279 aa22.21■■□□□ 1.15
PTPRO-209ENST00000543886 COG3Q96JB2 828 aa22.21■■□□□ 1.15
PTPRO-209ENST00000543886 MYH16Q9H6N6 1097 aa22.18■■□□□ 1.14
PTPRO-209ENST00000543886 AATKQ6ZMQ8 1374 aa22.18■■□□□ 1.14
PTPRO-209ENST00000543886 CDK12Q9NYV4 1490 aaPredicted RBP22.18■■□□□ 1.14
PTPRO-209ENST00000543886 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
PTPRO-209ENST00000543886 BCAR3O75815 825 aa22.17■■□□□ 1.14
PTPRO-209ENST00000543886 FBLN1P23142 703 aa22.16■■□□□ 1.14
PTPRO-209ENST00000543886 TMPOP42166 694 aaKnown RBP22.16■■□□□ 1.14
PTPRO-209ENST00000543886 ZRANB1Q9UGI0 708 aa22.16■■□□□ 1.14
PTPRO-209ENST00000543886 XRN1Q8IZH2 1706 aaKnown RBP22.16■■□□□ 1.14
PTPRO-209ENST00000543886 LRRC7Q96NW7 1537 aa22.15■■□□□ 1.14
PTPRO-209ENST00000543886 PLEKHG3A1L390 1219 aa22.15■■□□□ 1.14
PTPRO-209ENST00000543886 ACEP12821 1306 aa22.15■■□□□ 1.14
PTPRO-209ENST00000543886 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
PTPRO-209ENST00000543886 FCHSD2O94868 740 aa22.15■■□□□ 1.14
PTPRO-209ENST00000543886 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
PTPRO-209ENST00000543886 NEFMP07197 916 aa22.13■■□□□ 1.13
PTPRO-209ENST00000543886 CANXP27824 592 aaKnown RBP22.13■■□□□ 1.13
PTPRO-209ENST00000543886 ZNF142P52746 1687 aaPredicted RBP22.12■■□□□ 1.13
PTPRO-209ENST00000543886 TTC21BQ7Z4L5 1316 aa22.12■■□□□ 1.13
PTPRO-209ENST00000543886 USP6P35125 1406 aa22.12■■□□□ 1.13
PTPRO-209ENST00000543886 PIK3R4Q99570 1358 aa22.11■■□□□ 1.13
PTPRO-209ENST00000543886 ADAMTSL3P82987 1691 aa22.11■■□□□ 1.13
PTPRO-209ENST00000543886 RIPK4P57078 832 aa22.1■■□□□ 1.13
PTPRO-209ENST00000543886 RSPH6AQ9H0K4 717 aa22.1■■□□□ 1.13
PTPRO-209ENST00000543886 TRIM35Q9UPQ4 493 aa22.1■■□□□ 1.13
PTPRO-209ENST00000543886 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
PTPRO-209ENST00000543886 RARSP54136 660 aaKnown RBP22.09■■□□□ 1.13
PTPRO-209ENST00000543886 PDE3AQ14432 1141 aa22.08■■□□□ 1.13
PTPRO-209ENST00000543886 RRS1Q15050 365 aaKnown RBP22.08■■□□□ 1.13
PTPRO-209ENST00000543886 IL16Q14005 1332 aa22.08■■□□□ 1.12
PTPRO-209ENST00000543886 IL13P35225 146 aa22.08■■□□□ 1.12
PTPRO-209ENST00000543886 FANCIQ9NVI1 1328 aa22.07■■□□□ 1.12
PTPRO-209ENST00000543886 OVOS2A0A0J9YW53 1432 aa22.07■■□□□ 1.12
PTPRO-209ENST00000543886 OVOS2Q6IE36 1432 aa22.07■■□□□ 1.12
PTPRO-209ENST00000543886 ANKLE2Q86XL3 938 aa22.07■■□□□ 1.12
PTPRO-209ENST00000543886 KCNA6P17658 529 aa22.06■■□□□ 1.12
PTPRO-209ENST00000543886 NALCNQ8IZF0 1738 aa22.05■■□□□ 1.12
PTPRO-209ENST00000543886 TCERG1O14776 1098 aaKnown RBP22.05■■□□□ 1.12
PTPRO-209ENST00000543886 HMOX1P09601 288 aa22.05■■□□□ 1.12
PTPRO-209ENST00000543886 CT47B1P0C2W7 299 aaPredicted RBP22.05■■□□□ 1.12
PTPRO-209ENST00000543886 RGPD8O14715 1765 aaPredicted RBP22.05■■□□□ 1.12
PTPRO-209ENST00000543886 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
PTPRO-209ENST00000543886 TSR2Q969E8 191 aaKnown RBP22.04■■□□□ 1.12
PTPRO-209ENST00000543886 TTC21AQ8NDW8 1320 aa22.04■■□□□ 1.12
PTPRO-209ENST00000543886 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
PTPRO-209ENST00000543886 CENPQQ7L2Z9 268 aaPredicted RBP22.03■■□□□ 1.12
PTPRO-209ENST00000543886 PMFBP1Q8TBY8 1022 aa22.03■■□□□ 1.12
PTPRO-209ENST00000543886 SSH2Q76I76 1423 aa22.03■■□□□ 1.12
PTPRO-209ENST00000543886 NGDNQ8NEJ9 315 aaKnown RBP22.03■■□□□ 1.12
PTPRO-209ENST00000543886 KDM2BQ8NHM5 1336 aa22.02■■□□□ 1.12
PTPRO-209ENST00000543886 FMN2Q9NZ56 1722 aa22.02■■□□□ 1.12
PTPRO-209ENST00000543886 NFE2L2Q16236 605 aa22.02■■□□□ 1.11
PTPRO-209ENST00000543886 CHD2O14647 1828 aaKnown RBP22■■□□□ 1.11
PTPRO-209ENST00000543886 USP31Q70CQ4 1352 aa22■■□□□ 1.11
PTPRO-209ENST00000543886 EXOSC9Q06265 439 aaKnown RBP22■■□□□ 1.11
PTPRO-209ENST00000543886 PANK1Q8TE04 598 aa22■■□□□ 1.11
PTPRO-209ENST00000543886 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
PTPRO-209ENST00000543886 SETD1BQ9UPS6 1966 aaKnown RBP22■■□□□ 1.11
PTPRO-209ENST00000543886 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
PTPRO-209ENST00000543886 MS4A1P11836 297 aa21.98■■□□□ 1.11
PTPRO-209ENST00000543886 CALD1Q05682 793 aaKnown RBP21.97■■□□□ 1.11
PTPRO-209ENST00000543886 COG6Q9Y2V7 657 aa21.97■■□□□ 1.11
PTPRO-209ENST00000543886 PEAK1Q9H792 1746 aa21.95■■□□□ 1.11
PTPRO-209ENST00000543886 LMOD3Q0VAK6 560 aa21.95■■□□□ 1.1
PTPRO-209ENST00000543886 EIF4A2Q14240 407 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms