RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
CD4-211ENST00000543755 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
CD4-211ENST00000543755 PRELPP51888 382 aa13.45□□□□□ -0.26
CD4-211ENST00000543755 COL13A1Q5TAT6 717 aaPredicted RBP13.45□□□□□ -0.26
CD4-211ENST00000543755 SHANK3Q9BYB0 1731 aa13.44□□□□□ -0.26
CD4-211ENST00000543755 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
CD4-211ENST00000543755 USP35Q9P2H5 1018 aa13.44□□□□□ -0.26
CD4-211ENST00000543755 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
CD4-211ENST00000543755 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
CD4-211ENST00000543755 ABCA3Q99758 1704 aa13.43□□□□□ -0.26
CD4-211ENST00000543755 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
CD4-211ENST00000543755 COL14A1Q05707 1796 aaKnown RBP13.43□□□□□ -0.26
CD4-211ENST00000543755 SPATA31A1Q5TZJ5 1347 aa13.42□□□□□ -0.26
CD4-211ENST00000543755 ARXQ96QS3 562 aa13.42□□□□□ -0.26
CD4-211ENST00000543755 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
CD4-211ENST00000543755 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
CD4-211ENST00000543755 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
CD4-211ENST00000543755 PRDM11Q9NQV5 511 aa13.41□□□□□ -0.26
CD4-211ENST00000543755 STK26Q9P289 416 aa13.41□□□□□ -0.26
CD4-211ENST00000543755 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
CD4-211ENST00000543755 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
CD4-211ENST00000543755 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
CD4-211ENST00000543755 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
CD4-211ENST00000543755 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
CD4-211ENST00000543755 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
CD4-211ENST00000543755 TECPR2O15040 1411 aa13.38□□□□□ -0.27
CD4-211ENST00000543755 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
CD4-211ENST00000543755 KIF1BO60333 1816 aa13.36□□□□□ -0.27
CD4-211ENST00000543755 EVA1CP58658 441 aa13.36□□□□□ -0.27
CD4-211ENST00000543755 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
CD4-211ENST00000543755 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
CD4-211ENST00000543755 NRXN1Q9ULB1 1477 aa13.36□□□□□ -0.27
CD4-211ENST00000543755 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
CD4-211ENST00000543755 MAP3K5Q99683 1374 aa13.34□□□□□ -0.27
CD4-211ENST00000543755 PLSCR1O15162 318 aa13.34□□□□□ -0.27
CD4-211ENST00000543755 APLP1P51693 650 aa13.34□□□□□ -0.27
CD4-211ENST00000543755 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
CD4-211ENST00000543755 GPRASP1Q5JY77 1395 aa13.33□□□□□ -0.27
CD4-211ENST00000543755 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
CD4-211ENST00000543755 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
CD4-211ENST00000543755 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
CD4-211ENST00000543755 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
CD4-211ENST00000543755 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
CD4-211ENST00000543755 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
CD4-211ENST00000543755 GRIN3BO60391 1043 aa13.3□□□□□ -0.28
CD4-211ENST00000543755 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
CD4-211ENST00000543755 PROM2Q8N271 834 aa13.3□□□□□ -0.28
CD4-211ENST00000543755 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
CD4-211ENST00000543755 DNAJC5GQ8N7S2 189 aa13.3□□□□□ -0.28
CD4-211ENST00000543755 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
CD4-211ENST00000543755 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
CD4-211ENST00000543755 KIAA0232Q92628 1395 aa13.29□□□□□ -0.28
CD4-211ENST00000543755 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
CD4-211ENST00000543755 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
CD4-211ENST00000543755 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
CD4-211ENST00000543755 RGPD3A6NKT7 1758 aaPredicted RBP13.28□□□□□ -0.28
CD4-211ENST00000543755 RGPD8O14715 1765 aaPredicted RBP13.28□□□□□ -0.28
CD4-211ENST00000543755 RGPD4Q7Z3J3 1758 aa13.28□□□□□ -0.28
CD4-211ENST00000543755 NLGN2Q8NFZ4 835 aa13.28□□□□□ -0.28
CD4-211ENST00000543755 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
CD4-211ENST00000543755 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
CD4-211ENST00000543755 TXNRD1Q16881 649 aa13.27□□□□□ -0.29
CD4-211ENST00000543755 TMEM132EQ6IEE7 984 aa13.27□□□□□ -0.29
CD4-211ENST00000543755 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
CD4-211ENST00000543755 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
CD4-211ENST00000543755 WWC3Q9ULE0 1092 aa13.26□□□□□ -0.29
CD4-211ENST00000543755 SSH2Q76I76 1423 aa13.25□□□□□ -0.29
CD4-211ENST00000543755 POLD1P28340 1107 aa13.25□□□□□ -0.29
CD4-211ENST00000543755 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
CD4-211ENST00000543755 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
CD4-211ENST00000543755 PPLO60437 1756 aa13.25□□□□□ -0.29
CD4-211ENST00000543755 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
CD4-211ENST00000543755 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
CD4-211ENST00000543755 ACIN1Q9UKV3 1341 aaKnown RBP13.24□□□□□ -0.29
CD4-211ENST00000543755 NGDNQ8NEJ9 315 aaKnown RBP13.24□□□□□ -0.29
CD4-211ENST00000543755 YTHDC2Q9H6S0 1430 aaKnown RBP13.23□□□□□ -0.29
CD4-211ENST00000543755 ADGRF5Q8IZF2 1346 aa13.23□□□□□ -0.29
CD4-211ENST00000543755 ITGAEP38570 1179 aa13.23□□□□□ -0.29
CD4-211ENST00000543755 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
CD4-211ENST00000543755 ALS2Q96Q42 1657 aa13.23□□□□□ -0.29
CD4-211ENST00000543755 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
CD4-211ENST00000543755 KIF3CO14782 793 aa13.22□□□□□ -0.29
CD4-211ENST00000543755 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.29
CD4-211ENST00000543755 DDB1Q16531 1140 aa13.21□□□□□ -0.29
CD4-211ENST00000543755 POGKQ9P215 609 aa13.21□□□□□ -0.29
CD4-211ENST00000543755 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
CD4-211ENST00000543755 HTRA3P83110 453 aa13.2□□□□□ -0.3
CD4-211ENST00000543755 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
CD4-211ENST00000543755 ADCY9O60503 1353 aa13.2□□□□□ -0.3
CD4-211ENST00000543755 PRAM1Q96QH2 718 aa13.19□□□□□ -0.3
CD4-211ENST00000543755 ANKRD30BQ9BXX2 1392 aa13.19□□□□□ -0.3
CD4-211ENST00000543755 RGL3Q3MIN7 710 aa13.18□□□□□ -0.3
CD4-211ENST00000543755 JMYQ8N9B5 988 aa13.18□□□□□ -0.3
CD4-211ENST00000543755 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
CD4-211ENST00000543755 AATKQ6ZMQ8 1374 aa13.18□□□□□ -0.3
CD4-211ENST00000543755 ATP7BP35670 1465 aa13.17□□□□□ -0.3
CD4-211ENST00000543755 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
CD4-211ENST00000543755 CRYBG1Q9Y4K1 1723 aa13.17□□□□□ -0.3
CD4-211ENST00000543755 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
CD4-211ENST00000543755 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms