RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 MARVELD3Q96A59 401 aa7.67□□□□□ -1.18
NPIPB4-219ENST00000543660 TMEM131LA2VDJ0 1609 aa7.67□□□□□ -1.18
NPIPB4-219ENST00000543660 MYO5BQ9ULV0 1848 aa7.66□□□□□ -1.18
NPIPB4-219ENST00000543660 C3orf67Q6ZVT6 689 aa7.66□□□□□ -1.18
NPIPB4-219ENST00000543660 L3MBTL3Q96JM7 780 aaPredicted RBP7.66□□□□□ -1.18
NPIPB4-219ENST00000543660 PCDHB8Q9UN66 801 aa7.66□□□□□ -1.18
NPIPB4-219ENST00000543660 KANK4Q5T7N3 995 aaPredicted RBP7.65□□□□□ -1.18
NPIPB4-219ENST00000543660 RPRD2Q5VT52 1461 aaKnown RBP7.65□□□□□ -1.18
NPIPB4-219ENST00000543660 DEFB132Q7Z7B7 95 aa7.65□□□□□ -1.18
NPIPB4-219ENST00000543660 PDCD7Q8N8D1 485 aaKnown RBP7.65□□□□□ -1.18
NPIPB4-219ENST00000543660 GCC2Q8IWJ2 1684 aa7.64□□□□□ -1.19
NPIPB4-219ENST00000543660 TRPM2O94759 1503 aa7.64□□□□□ -1.19
NPIPB4-219ENST00000543660 BCL9LQ86UU0 1499 aa7.64□□□□□ -1.19
NPIPB4-219ENST00000543660 BLMP54132 1417 aaPredicted RBP7.64□□□□□ -1.19
NPIPB4-219ENST00000543660 PTCH1Q13635 1447 aa7.64□□□□□ -1.19
NPIPB4-219ENST00000543660 SOS2Q07890 1332 aaPredicted RBP7.64□□□□□ -1.19
NPIPB4-219ENST00000543660 ZNF467Q7Z7K2 595 aaPredicted RBP7.64□□□□□ -1.19
NPIPB4-219ENST00000543660 DAPK1P53355 1430 aa7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 CHGAP10645 457 aaKnown RBP7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 EMP3P54852 163 aa7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 GOLGA2Q08379 1002 aa7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 MKRN3Q13064 507 aaKnown RBP7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 HOMEZQ8IX15 550 aa7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 GJD4Q96KN9 370 aaPredicted RBP7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 CHIC2Q9UKJ5 165 aa7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 TIMELESSQ9UNS1 1208 aa7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 CROCC2H7BZ55 1655 aa7.63□□□□□ -1.19
NPIPB4-219ENST00000543660 ANKRD30AQ9BXX3 1397 aa7.62□□□□□ -1.19
NPIPB4-219ENST00000543660 XRN1Q8IZH2 1706 aaKnown RBP7.62□□□□□ -1.19
NPIPB4-219ENST00000543660 HRCP23327 699 aa7.62□□□□□ -1.19
NPIPB4-219ENST00000543660 FBXO3Q9UK99 471 aa7.62□□□□□ -1.19
NPIPB4-219ENST00000543660 LAMC1P11047 1609 aa7.62□□□□□ -1.19
NPIPB4-219ENST00000543660 C1orf167Q5SNV9 1468 aa7.62□□□□□ -1.19
NPIPB4-219ENST00000543660 ADGRL3Q9HAR2 1447 aa7.61□□□□□ -1.19
NPIPB4-219ENST00000543660 TULP1O00294 542 aaPredicted RBP7.61□□□□□ -1.19
NPIPB4-219ENST00000543660 GSE1Q14687 1217 aa7.61□□□□□ -1.19
NPIPB4-219ENST00000543660 ORAI2Q96SN7 254 aa7.61□□□□□ -1.19
NPIPB4-219ENST00000543660 UNC13BO14795 1591 aa7.61□□□□□ -1.19
NPIPB4-219ENST00000543660 MYOM2P54296 1465 aa7.61□□□□□ -1.19
NPIPB4-219ENST00000543660 METP08581 1390 aa7.6□□□□□ -1.19
NPIPB4-219ENST00000543660 PSDA5PKW4 1024 aaPredicted RBP7.6□□□□□ -1.19
NPIPB4-219ENST00000543660 NRXN3Q9Y4C0 1643 aa7.6□□□□□ -1.19
NPIPB4-219ENST00000543660 CHRM1P11229 460 aaPredicted RBP7.59□□□□□ -1.19
NPIPB4-219ENST00000543660 COL22A1Q8NFW1 1626 aaPredicted RBP7.59□□□□□ -1.19
NPIPB4-219ENST00000543660 PTPN23Q9H3S7 1636 aa7.59□□□□□ -1.19
NPIPB4-219ENST00000543660 RALGAPBQ86X10 1494 aa7.58□□□□□ -1.2
NPIPB4-219ENST00000543660 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
NPIPB4-219ENST00000543660 UNC5CLQ8IV45 518 aa7.58□□□□□ -1.2
NPIPB4-219ENST00000543660 HS3ST6Q96QI5 342 aa7.58□□□□□ -1.2
NPIPB4-219ENST00000543660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.58□□□□□ -1.22e-15■□□□□ 9.2
NPIPB4-219ENST00000543660 GLI3P10071 1580 aa7.58□□□□□ -1.2
NPIPB4-219ENST00000543660 NALCNQ8IZF0 1738 aa7.58□□□□□ -1.2
NPIPB4-219ENST00000543660 YY1P25490 414 aa7.57□□□□□ -1.2
NPIPB4-219ENST00000543660 SEPT12Q8IYM1 358 aa7.57□□□□□ -1.2
NPIPB4-219ENST00000543660 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
NPIPB4-219ENST00000543660 KRTAP3-2Q9BYR7 98 aa7.57□□□□□ -1.2
NPIPB4-219ENST00000543660 VPS8Q8N3P4 1428 aa7.57□□□□□ -1.2
NPIPB4-219ENST00000543660 ANKRD50Q9ULJ7 1429 aa7.57□□□□□ -1.2
NPIPB4-219ENST00000543660 ADGRL2O95490 1459 aa7.56□□□□□ -1.2
NPIPB4-219ENST00000543660 FAM205CA6NFA0 338 aa7.56□□□□□ -1.2
NPIPB4-219ENST00000543660 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
NPIPB4-219ENST00000543660 BRWD3Q6RI45 1802 aa7.56□□□□□ -1.2
NPIPB4-219ENST00000543660 SLIT2O94813 1529 aa7.56□□□□□ -1.2
NPIPB4-219ENST00000543660 SPHKAPQ2M3C7 1700 aa7.55□□□□□ -1.2
NPIPB4-219ENST00000543660 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.55□□□□□ -1.2
NPIPB4-219ENST00000543660 PXDNQ92626 1479 aa7.55□□□□□ -1.2
NPIPB4-219ENST00000543660 E9PCH4 1651 aa7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 UTRNP46939 3433 aa7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 BAG6P46379 1132 aa7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 PSEN1P49768 467 aa7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 KRT27Q7Z3Y8 459 aa7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 MARF1Q9Y4F3 1742 aaKnown RBP7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 ROBO2Q9HCK4 1378 aa7.54□□□□□ -1.2
NPIPB4-219ENST00000543660 NPHP3Q7Z494 1330 aa7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 POTEB3A0JP26 581 aa7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 FOXO3O43524 673 aa7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 XPCQ01831 940 aaPredicted RBP7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 EN1Q05925 392 aaPredicted RBP7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 VPS72Q15906 364 aa7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 POTEBQ6S5H4 581 aa7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
NPIPB4-219ENST00000543660 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
NPIPB4-219ENST00000543660 KLHL34Q8N239 644 aa7.52□□□□□ -1.21
NPIPB4-219ENST00000543660 IQGAP3Q86VI3 1631 aa7.52□□□□□ -1.21
NPIPB4-219ENST00000543660 ZNF326Q5BKZ1 582 aaKnown RBP7.51□□□□□ -1.21
NPIPB4-219ENST00000543660 PRAG1Q86YV5 1406 aa7.51□□□□□ -1.21
NPIPB4-219ENST00000543660 SPATA31A3Q5VYP0 1347 aa7.51□□□□□ -1.21
NPIPB4-219ENST00000543660 G3V3G9 751 aa7.5□□□□□ -1.21
NPIPB4-219ENST00000543660 PDAP1Q13442 181 aaKnown RBP7.5□□□□□ -1.21
NPIPB4-219ENST00000543660 NEXMIFQ5QGS0 1516 aa7.49□□□□□ -1.21
NPIPB4-219ENST00000543660 HFM1A2PYH4 1435 aa7.49□□□□□ -1.21
NPIPB4-219ENST00000543660 DISP2A7MBM2 1401 aa7.49□□□□□ -1.21
NPIPB4-219ENST00000543660 USP32Q8NFA0 1604 aa7.49□□□□□ -1.21
NPIPB4-219ENST00000543660 NUP155O75694 1391 aa7.48□□□□□ -1.21
NPIPB4-219ENST00000543660 LRPPRCP42704 1394 aaKnown RBP7.48□□□□□ -1.21
NPIPB4-219ENST00000543660 VASPP50552 380 aaPredicted RBP7.48□□□□□ -1.21
NPIPB4-219ENST00000543660 EZH2Q15910 746 aaKnown RBP7.48□□□□□ -1.21
NPIPB4-219ENST00000543660 FAM182BQ5T319 152 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms