RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 FAM83GA6ND36 823 aa23.58■■□□□ 1.37
SPPL3-207ENST00000543608 VPS72Q15906 364 aa23.57■■□□□ 1.36
SPPL3-207ENST00000543608 PHRF1Q9P1Y6 1649 aaKnown RBP23.56■■□□□ 1.36
SPPL3-207ENST00000543608 SIN3AQ96ST3 1273 aa23.56■■□□□ 1.36
SPPL3-207ENST00000543608 CCDC9Q9Y3X0 531 aaKnown RBP23.56■■□□□ 1.36
SPPL3-207ENST00000543608 L3MBTL2Q969R5 705 aa23.55■■□□□ 1.36
SPPL3-207ENST00000543608 TRPM1Q7Z4N2 1603 aa23.54■■□□□ 1.36
SPPL3-207ENST00000543608 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
SPPL3-207ENST00000543608 CENPJQ9HC77 1338 aaPredicted RBP23.52■■□□□ 1.36
SPPL3-207ENST00000543608 POLR3AO14802 1390 aaPredicted RBP23.52■■□□□ 1.36
SPPL3-207ENST00000543608 SEPT12Q8IYM1 358 aa23.51■■□□□ 1.35
SPPL3-207ENST00000543608 ACEP12821 1306 aa23.51■■□□□ 1.35
SPPL3-207ENST00000543608 NEUROD1Q13562 356 aa23.5■■□□□ 1.35
SPPL3-207ENST00000543608 NUTM2GQ5VZR2 741 aa23.5■■□□□ 1.35
SPPL3-207ENST00000543608 CCDC61Q9Y6R9 512 aa23.5■■□□□ 1.35
SPPL3-207ENST00000543608 SRPK2P78362 688 aaKnown RBP23.48■■□□□ 1.35
SPPL3-207ENST00000543608 CABP2Q9NPB3 220 aa23.48■■□□□ 1.35
SPPL3-207ENST00000543608 PPIP5K1Q6PFW1 1433 aa23.48■■□□□ 1.35
SPPL3-207ENST00000543608 NBPF8Q3BBV2 869 aa23.47■■□□□ 1.35
SPPL3-207ENST00000543608 PRDM11Q9NQV5 511 aa23.47■■□□□ 1.35
SPPL3-207ENST00000543608 KIAA0232Q92628 1395 aa23.47■■□□□ 1.35
SPPL3-207ENST00000543608 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
SPPL3-207ENST00000543608 A0A0G2JS52 829 aa23.46■■□□□ 1.35
SPPL3-207ENST00000543608 PLEKHG3A1L390 1219 aa23.46■■□□□ 1.35
SPPL3-207ENST00000543608 MYT1Q01538 1121 aa23.46■■□□□ 1.35
SPPL3-207ENST00000543608 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
SPPL3-207ENST00000543608 ONECUT3O60422 494 aaPredicted RBP23.44■■□□□ 1.34
SPPL3-207ENST00000543608 CHRNA2Q15822 529 aa23.44■■□□□ 1.34
SPPL3-207ENST00000543608 BLMP54132 1417 aaPredicted RBP23.43■■□□□ 1.34
SPPL3-207ENST00000543608 ZC3H6P61129 1189 aaKnown RBP23.42■■□□□ 1.34
SPPL3-207ENST00000543608 KRT27Q7Z3Y8 459 aa23.42■■□□□ 1.34
SPPL3-207ENST00000543608 ROCK2O75116 1388 aaKnown RBP23.41■■□□□ 1.34
SPPL3-207ENST00000543608 CCDC125Q86Z20 511 aa23.41■■□□□ 1.34
SPPL3-207ENST00000543608 THSD7AQ9UPZ6 1657 aa23.41■■□□□ 1.34
SPPL3-207ENST00000543608 SPATA31A5Q5VU36 1347 aa23.4■■□□□ 1.34
SPPL3-207ENST00000543608 SPATA31A7Q8IWB4 1347 aa23.4■■□□□ 1.34
SPPL3-207ENST00000543608 ABTB2Q8N961 1025 aa23.4■■□□□ 1.34
SPPL3-207ENST00000543608 DEFB132Q7Z7B7 95 aa23.38■■□□□ 1.33
SPPL3-207ENST00000543608 STRN4Q9NRL3 753 aa23.37■■□□□ 1.33
SPPL3-207ENST00000543608 LMO7Q8WWI1 1683 aa23.37■■□□□ 1.33
SPPL3-207ENST00000543608 USP19O94966 1318 aa23.36■■□□□ 1.33
SPPL3-207ENST00000543608 USP6P35125 1406 aa23.36■■□□□ 1.33
SPPL3-207ENST00000543608 CABP1Q9NZU7 370 aa23.36■■□□□ 1.33
SPPL3-207ENST00000543608 FAM182BQ5T319 152 aa23.35■■□□□ 1.33
SPPL3-207ENST00000543608 PIK3C2AO00443 1686 aa23.35■■□□□ 1.33
SPPL3-207ENST00000543608 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
SPPL3-207ENST00000543608 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.33
SPPL3-207ENST00000543608 EVC2Q86UK5 1308 aa23.33■■□□□ 1.33
SPPL3-207ENST00000543608 ZRANB1Q9UGI0 708 aa23.33■■□□□ 1.33
SPPL3-207ENST00000543608 SSH2Q76I76 1423 aa23.33■■□□□ 1.32
SPPL3-207ENST00000543608 SF3B2Q13435 895 aaKnown RBP23.32■■□□□ 1.32
SPPL3-207ENST00000543608 AKAP12Q02952 1782 aa23.32■■□□□ 1.32
SPPL3-207ENST00000543608 CPDO75976 1380 aa23.31■■□□□ 1.32
SPPL3-207ENST00000543608 USP35Q9P2H5 1018 aa23.31■■□□□ 1.32
SPPL3-207ENST00000543608 SRCAPQ6ZRS2 3230 aa23.3■■□□□ 1.32
SPPL3-207ENST00000543608 SLIT3O75094 1523 aa23.3■■□□□ 1.32
SPPL3-207ENST00000543608 NLRP13Q86W25 1043 aa23.3■■□□□ 1.32
SPPL3-207ENST00000543608 RGPD1P0DJD0 1748 aa23.3■■□□□ 1.32
SPPL3-207ENST00000543608 BRD4O60885 1362 aaPredicted RBP23.28■■□□□ 1.32
SPPL3-207ENST00000543608 TNS1Q9HBL0 1735 aaKnown RBP23.28■■□□□ 1.32
SPPL3-207ENST00000543608 GCP02774 474 aa23.28■■□□□ 1.32
SPPL3-207ENST00000543608 ZBTB7CA1YPR0 619 aa23.27■■□□□ 1.32
SPPL3-207ENST00000543608 EVA1CP58658 441 aa23.27■■□□□ 1.32
SPPL3-207ENST00000543608 LARP1Q6PKG0 1096 aaKnown RBP23.27■■□□□ 1.32
SPPL3-207ENST00000543608 COL5A2P05997 1499 aaPredicted RBP23.26■■□□□ 1.31
SPPL3-207ENST00000543608 NLRP6P59044 892 aa23.26■■□□□ 1.31
SPPL3-207ENST00000543608 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
SPPL3-207ENST00000543608 MON2Q7Z3U7 1717 aa23.23■■□□□ 1.31
SPPL3-207ENST00000543608 CARD11Q9BXL7 1154 aa23.23■■□□□ 1.31
SPPL3-207ENST00000543608 COL18A1P39060 1754 aa23.22■■□□□ 1.31
SPPL3-207ENST00000543608 BAG6P46379 1132 aa23.21■■□□□ 1.31
SPPL3-207ENST00000543608 SBNO2Q9Y2G9 1366 aa23.21■■□□□ 1.31
SPPL3-207ENST00000543608 CPSF1Q10570 1443 aaKnown RBP23.2■■□□□ 1.3
SPPL3-207ENST00000543608 TTC21BQ7Z4L5 1316 aa23.2■■□□□ 1.3
SPPL3-207ENST00000543608 BARGINQ6ZT62 677 aa23.2■■□□□ 1.3
SPPL3-207ENST00000543608 TCP11L2Q8N4U5 519 aa23.19■■□□□ 1.3
SPPL3-207ENST00000543608 PARP4Q9UKK3 1724 aaKnown RBP23.19■■□□□ 1.3
SPPL3-207ENST00000543608 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
SPPL3-207ENST00000543608 SOX12O15370 315 aa23.18■■□□□ 1.3
SPPL3-207ENST00000543608 EN1Q05925 392 aaPredicted RBP23.18■■□□□ 1.3
SPPL3-207ENST00000543608 RGPD5Q99666 1765 aa23.18■■□□□ 1.3
SPPL3-207ENST00000543608 CRB1P82279 1406 aa23.17■■□□□ 1.3
SPPL3-207ENST00000543608 AATKQ6ZMQ8 1374 aa23.17■■□□□ 1.3
SPPL3-207ENST00000543608 ZNF692Q9BU19 519 aaPredicted RBP23.16■■□□□ 1.3
SPPL3-207ENST00000543608 WNK3Q9BYP7 1800 aa23.16■■□□□ 1.3
SPPL3-207ENST00000543608 CD163L1Q9NR16 1453 aa23.16■■□□□ 1.3
SPPL3-207ENST00000543608 LRRC37A3O60309 1634 aa23.15■■□□□ 1.3
SPPL3-207ENST00000543608 NFAT5O94916 1531 aa23.15■■□□□ 1.3
SPPL3-207ENST00000543608 TRIM37O94972 964 aa23.15■■□□□ 1.3
SPPL3-207ENST00000543608 TRIM26Q12899 539 aaPredicted RBP23.15■■□□□ 1.3
SPPL3-207ENST00000543608 DISP2A7MBM2 1401 aa23.15■■□□□ 1.3
SPPL3-207ENST00000543608 TTC21AQ8NDW8 1320 aa23.14■■□□□ 1.3
SPPL3-207ENST00000543608 PSDA5PKW4 1024 aaPredicted RBP23.14■■□□□ 1.29
SPPL3-207ENST00000543608 PDE3BQ13370 1112 aa23.14■■□□□ 1.29
SPPL3-207ENST00000543608 FAM196AQ6ZSG2 479 aa23.14■■□□□ 1.29
SPPL3-207ENST00000543608 AXIN2Q9Y2T1 843 aa23.13■■□□□ 1.29
SPPL3-207ENST00000543608 THRAP3Q9Y2W1 955 aaKnown RBP23.12■■□□□ 1.29
SPPL3-207ENST00000543608 USP54Q70EL1 1684 aa23.12■■□□□ 1.29
SPPL3-207ENST00000543608 EZH2Q15910 746 aaKnown RBP23.11■■□□□ 1.29
SPPL3-207ENST00000543608 ARHGEF25Q86VW2 580 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms