RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 CAPN5O15484 640 aaPredicted RBP11.33□□□□□ -0.6
MRPL48-212ENST00000543374 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
MRPL48-212ENST00000543374 TUSC1Q2TAM9 212 aa11.32□□□□□ -0.6
MRPL48-212ENST00000543374 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
MRPL48-212ENST00000543374 PDE4DQ08499 809 aa11.31□□□□□ -0.6
MRPL48-212ENST00000543374 FAM174AQ8TBP5 190 aa11.31□□□□□ -0.6
MRPL48-212ENST00000543374 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
MRPL48-212ENST00000543374 NFX1Q12986 1120 aaKnown RBP11.3□□□□□ -0.6
MRPL48-212ENST00000543374 TERTO14746 1132 aaKnown RBP11.29□□□□□ -0.6
MRPL48-212ENST00000543374 NUTM2BA6NNL0 878 aaPredicted RBP11.28□□□□□ -0.6
MRPL48-212ENST00000543374 NUTM2EB1AL46 878 aaPredicted RBP11.28□□□□□ -0.6
MRPL48-212ENST00000543374 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
MRPL48-212ENST00000543374 NUTM2AQ8IVF1 878 aaPredicted RBP11.28□□□□□ -0.6
MRPL48-212ENST00000543374 ARMC2Q8NEN0 867 aa11.28□□□□□ -0.6
MRPL48-212ENST00000543374 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
MRPL48-212ENST00000543374 WIPF1O43516 503 aa11.26□□□□□ -0.61
MRPL48-212ENST00000543374 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
MRPL48-212ENST00000543374 INSM1Q01101 510 aaPredicted RBP11.26□□□□□ -0.61
MRPL48-212ENST00000543374 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
MRPL48-212ENST00000543374 SLC16A10Q8TF71 515 aa11.26□□□□□ -0.61
MRPL48-212ENST00000543374 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
MRPL48-212ENST00000543374 BPHLQ86WA6 291 aaPredicted RBP11.25□□□□□ -0.61
MRPL48-212ENST00000543374 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
MRPL48-212ENST00000543374 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
MRPL48-212ENST00000543374 NNTQ13423 1086 aa11.24□□□□□ -0.61
MRPL48-212ENST00000543374 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
MRPL48-212ENST00000543374 CABLES1Q8TDN4 633 aa11.24□□□□□ -0.61
MRPL48-212ENST00000543374 CDK15Q96Q40 435 aa11.24□□□□□ -0.61
MRPL48-212ENST00000543374 LILRB3O75022 631 aa11.23□□□□□ -0.61
MRPL48-212ENST00000543374 AGERQ15109 404 aa11.23□□□□□ -0.61
MRPL48-212ENST00000543374 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
MRPL48-212ENST00000543374 ADH1CP00326 375 aa11.22□□□□□ -0.61
MRPL48-212ENST00000543374 TRIM46Q7Z4K8 759 aa11.22□□□□□ -0.61
MRPL48-212ENST00000543374 TSC1Q92574 1164 aa11.22□□□□□ -0.61
MRPL48-212ENST00000543374 MAP10Q9P2G4 905 aa11.22□□□□□ -0.61
MRPL48-212ENST00000543374 NXF1Q9UBU9 619 aaKnown RBP11.22□□□□□ -0.61
MRPL48-212ENST00000543374 BMP1P13497 986 aa11.21□□□□□ -0.61
MRPL48-212ENST00000543374 NR5A1Q13285 461 aa11.21□□□□□ -0.61
MRPL48-212ENST00000543374 SCARF1Q14162 830 aa11.21□□□□□ -0.61
MRPL48-212ENST00000543374 LIMD1Q9UGP4 676 aa11.21□□□□□ -0.61
MRPL48-212ENST00000543374 NBPF14Q5TI25 921 aa11.2□□□□□ -0.62
MRPL48-212ENST00000543374 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
MRPL48-212ENST00000543374 WDR4P57081 412 aaKnown RBP11.19□□□□□ -0.62
MRPL48-212ENST00000543374 ARID5BQ14865 1188 aa11.19□□□□□ -0.62
MRPL48-212ENST00000543374 QPCTQ16769 361 aa11.19□□□□□ -0.62
MRPL48-212ENST00000543374 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
MRPL48-212ENST00000543374 STK17AQ9UEE5 414 aa11.19□□□□□ -0.62
MRPL48-212ENST00000543374 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
MRPL48-212ENST00000543374 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
MRPL48-212ENST00000543374 MRPL14Q6P1L8 145 aaKnown RBP11.17□□□□□ -0.62
MRPL48-212ENST00000543374 TIMP2P16035 220 aa11.16□□□□□ -0.62
MRPL48-212ENST00000543374 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
MRPL48-212ENST00000543374 IRF7Q92985 503 aa11.16□□□□□ -0.62
MRPL48-212ENST00000543374 KLF16Q9BXK1 252 aaPredicted RBP11.15□□□□□ -0.62
MRPL48-212ENST00000543374 UPP2O95045 317 aa11.12□□□□□ -0.63
MRPL48-212ENST00000543374 GRM5P41594 1212 aa11.12□□□□□ -0.63
MRPL48-212ENST00000543374 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
MRPL48-212ENST00000543374 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
MRPL48-212ENST00000543374 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
MRPL48-212ENST00000543374 MAP4K5Q9Y4K4 846 aa11.12□□□□□ -0.63
MRPL48-212ENST00000543374 ZIC2O95409 532 aaPredicted RBP11.11□□□□□ -0.63
MRPL48-212ENST00000543374 C4orf48Q5BLP8 95 aa11.11□□□□□ -0.63
MRPL48-212ENST00000543374 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
MRPL48-212ENST00000543374 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
MRPL48-212ENST00000543374 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
MRPL48-212ENST00000543374 C1QTNF2Q9BXJ5 285 aa11.1□□□□□ -0.63
MRPL48-212ENST00000543374 H3BM21 787 aa11.09□□□□□ -0.63
MRPL48-212ENST00000543374 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
MRPL48-212ENST00000543374 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
MRPL48-212ENST00000543374 VASH1Q7L8A9 365 aaPredicted RBP11.08□□□□□ -0.64
MRPL48-212ENST00000543374 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
MRPL48-212ENST00000543374 DDRGK1Q96HY6 314 aa11.08□□□□□ -0.64
MRPL48-212ENST00000543374 EMILIN1Q9Y6C2 1016 aa11.07□□□□□ -0.64
MRPL48-212ENST00000543374 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
MRPL48-212ENST00000543374 NR3C2P08235 984 aa11.06□□□□□ -0.64
MRPL48-212ENST00000543374 PDXDC2PQ6P474 469 aa11.06□□□□□ -0.64
MRPL48-212ENST00000543374 CTDSPL2Q05D32 466 aa11.05□□□□□ -0.64
MRPL48-212ENST00000543374 SH3D19Q5HYK7 790 aa11.05□□□□□ -0.64
MRPL48-212ENST00000543374 LCE2CQ5TA81 110 aa11.05□□□□□ -0.64
MRPL48-212ENST00000543374 ZFAND3Q9H8U3 227 aa11.05□□□□□ -0.64
MRPL48-212ENST00000543374 CDV3Q9UKY7 258 aaKnown RBP11.05□□□□□ -0.64
MRPL48-212ENST00000543374 MAN1A2O60476 641 aa11.04□□□□□ -0.64
MRPL48-212ENST00000543374 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
MRPL48-212ENST00000543374 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
MRPL48-212ENST00000543374 BMP2P12643 396 aa11.03□□□□□ -0.64
MRPL48-212ENST00000543374 FSHRP23945 695 aa11.03□□□□□ -0.64
MRPL48-212ENST00000543374 GMPRP36959 345 aa11.03□□□□□ -0.64
MRPL48-212ENST00000543374 CCDC116Q8IYX3 515 aa11.03□□□□□ -0.64
MRPL48-212ENST00000543374 TSEN34Q9BSV6 310 aaKnown RBP11.03□□□□□ -0.64
MRPL48-212ENST00000543374 PPP2R2DQ66LE6 453 aa11.02□□□□□ -0.65
MRPL48-212ENST00000543374 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
MRPL48-212ENST00000543374 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
MRPL48-212ENST00000543374 PNMA1Q8ND90 353 aa11.02□□□□□ -0.65
MRPL48-212ENST00000543374 BCANQ96GW7 911 aa11.02□□□□□ -0.65
MRPL48-212ENST00000543374 KDM4CQ9H3R0 1056 aa11.02□□□□□ -0.65
MRPL48-212ENST00000543374 FKBPLQ9UIM3 349 aa11.02□□□□□ -0.65
MRPL48-212ENST00000543374 C6orf118Q5T5N4 469 aa11.01□□□□□ -0.65
MRPL48-212ENST00000543374 ARHGAP9Q9BRR9 750 aa11.01□□□□□ -0.65
MRPL48-212ENST00000543374 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
MRPL48-212ENST00000543374 VEGFBP49765 207 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms