RNA–Protein interactions for RNA: ENST00000543368.1

NPIPB3-212, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-212ENST00000543368 ATAD2Q6PL18 1390 aa14.57□□□□□ -0.08
NPIPB3-212ENST00000543368 ATRNO75882 1429 aa14.57□□□□□ -0.08
NPIPB3-212ENST00000543368 PPIP5K1Q6PFW1 1433 aa14.57□□□□□ -0.08
NPIPB3-212ENST00000543368 TOPAZ1Q8N9V7 1692 aa14.56□□□□□ -0.08
NPIPB3-212ENST00000543368 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
NPIPB3-212ENST00000543368 SLIT2O94813 1529 aa14.56□□□□□ -0.08
NPIPB3-212ENST00000543368 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
NPIPB3-212ENST00000543368 BCL9LQ86UU0 1499 aa14.55□□□□□ -0.08
NPIPB3-212ENST00000543368 ALS2Q96Q42 1657 aa14.55□□□□□ -0.08
NPIPB3-212ENST00000543368 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.53□□□□□ -0.08
NPIPB3-212ENST00000543368 CABLES1Q8TDN4 633 aa14.53□□□□□ -0.08
NPIPB3-212ENST00000543368 GJD4Q96KN9 370 aaPredicted RBP14.53□□□□□ -0.08
NPIPB3-212ENST00000543368 PUS7Q96PZ0 661 aaKnown RBP14.53□□□□□ -0.08
NPIPB3-212ENST00000543368 NLRP13Q86W25 1043 aa14.52□□□□□ -0.09
NPIPB3-212ENST00000543368 ABTB2Q8N961 1025 aa14.52□□□□□ -0.09
NPIPB3-212ENST00000543368 CABP1Q9NZU7 370 aa14.52□□□□□ -0.09
NPIPB3-212ENST00000543368 RGS12O14924 1447 aa14.51□□□□□ -0.09
NPIPB3-212ENST00000543368 VPS72Q15906 364 aa14.51□□□□□ -0.09
NPIPB3-212ENST00000543368 PCGF6Q9BYE7 350 aa14.51□□□□□ -0.09
NPIPB3-212ENST00000543368 NWD2Q9ULI1 1742 aa14.51□□□□□ -0.09
NPIPB3-212ENST00000543368 ABCA3Q99758 1704 aa14.5□□□□□ -0.09
NPIPB3-212ENST00000543368 PRDM11Q9NQV5 511 aa14.5□□□□□ -0.09
NPIPB3-212ENST00000543368 USP6P35125 1406 aa14.49□□□□□ -0.09
NPIPB3-212ENST00000543368 FAM83GA6ND36 823 aa14.49□□□□□ -0.09
NPIPB3-212ENST00000543368 PLEKHG5O94827 1062 aa14.49□□□□□ -0.09
NPIPB3-212ENST00000543368 COL14A1Q05707 1796 aaKnown RBP14.48□□□□□ -0.09
NPIPB3-212ENST00000543368 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
NPIPB3-212ENST00000543368 USP19O94966 1318 aa14.47□□□□□ -0.09
NPIPB3-212ENST00000543368 TTC21AQ8NDW8 1320 aa14.47□□□□□ -0.09
NPIPB3-212ENST00000543368 BTG4Q9NY30 223 aa14.47□□□□□ -0.09
NPIPB3-212ENST00000543368 NINLQ9Y2I6 1382 aa14.47□□□□□ -0.09
NPIPB3-212ENST00000543368 HDGFL2Q7Z4V5 671 aaPredicted RBP14.46□□□□□ -0.09
NPIPB3-212ENST00000543368 UPF1Q92900 1129 aaKnown RBP eCLIP14.46□□□□□ -0.09
NPIPB3-212ENST00000543368 CPDO75976 1380 aa14.46□□□□□ -0.1
NPIPB3-212ENST00000543368 PLCH1Q4KWH8 1693 aa14.46□□□□□ -0.1
NPIPB3-212ENST00000543368 NLRP6P59044 892 aa14.45□□□□□ -0.1
NPIPB3-212ENST00000543368 CDCA8Q53HL2 280 aa14.45□□□□□ -0.1
NPIPB3-212ENST00000543368 CCER1Q8TC90 406 aaPredicted RBP14.45□□□□□ -0.1
NPIPB3-212ENST00000543368 KIAA0232Q92628 1395 aa14.45□□□□□ -0.1
NPIPB3-212ENST00000543368 CPSF1Q10570 1443 aaKnown RBP14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 ONECUT3O60422 494 aaPredicted RBP14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 GCP02774 474 aa14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 CCDC125Q86Z20 511 aa14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 KCNH5Q8NCM2 988 aa14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 KTN1Q86UP2 1357 aaKnown RBP14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 CRYBG1Q9Y4K1 1723 aa14.44□□□□□ -0.1
NPIPB3-212ENST00000543368 TTC21BQ7Z4L5 1316 aa14.43□□□□□ -0.1
NPIPB3-212ENST00000543368 SSH2Q76I76 1423 aa14.43□□□□□ -0.1
NPIPB3-212ENST00000543368 ST20-MTHFSA0A0A6YYL1 179 aa14.43□□□□□ -0.1
NPIPB3-212ENST00000543368 TMF1P82094 1093 aa14.43□□□□□ -0.1
NPIPB3-212ENST00000543368 PHRF1Q9P1Y6 1649 aaKnown RBP14.43□□□□□ -0.1
NPIPB3-212ENST00000543368 ZC3H6P61129 1189 aaKnown RBP14.42□□□□□ -0.1
NPIPB3-212ENST00000543368 TMC1Q8TDI8 760 aa14.42□□□□□ -0.1
NPIPB3-212ENST00000543368 USP47Q96K76 1375 aa14.42□□□□□ -0.1
NPIPB3-212ENST00000543368 EVA1CP58658 441 aa14.41□□□□□ -0.1
NPIPB3-212ENST00000543368 TESK2Q96S53 571 aa14.41□□□□□ -0.1
NPIPB3-212ENST00000543368 GLI3P10071 1580 aa14.41□□□□□ -0.1
NPIPB3-212ENST00000543368 SPATA31A5Q5VU36 1347 aa14.41□□□□□ -0.1
NPIPB3-212ENST00000543368 SPATA31A7Q8IWB4 1347 aa14.41□□□□□ -0.1
NPIPB3-212ENST00000543368 NRKQ7Z2Y5 1582 aa14.4□□□□□ -0.1
NPIPB3-212ENST00000543368 SEPT12Q8IYM1 358 aa14.4□□□□□ -0.1
NPIPB3-212ENST00000543368 NRAPQ86VF7 1730 aa14.4□□□□□ -0.1
NPIPB3-212ENST00000543368 A0A0G2JS52 829 aa14.39□□□□□ -0.11
NPIPB3-212ENST00000543368 MYT1Q01538 1121 aa14.39□□□□□ -0.11
NPIPB3-212ENST00000543368 SLIT3O75094 1523 aa14.39□□□□□ -0.11
NPIPB3-212ENST00000543368 AKAP12Q02952 1782 aa14.39□□□□□ -0.11
NPIPB3-212ENST00000543368 EDC4Q6P2E9 1401 aaKnown RBP14.39□□□□□ -0.11
NPIPB3-212ENST00000543368 AATKQ6ZMQ8 1374 aa14.38□□□□□ -0.11
NPIPB3-212ENST00000543368 CHRNA2Q15822 529 aa14.38□□□□□ -0.11
NPIPB3-212ENST00000543368 THRAP3Q9Y2W1 955 aaKnown RBP14.38□□□□□ -0.11
NPIPB3-212ENST00000543368 USP31Q70CQ4 1352 aa14.37□□□□□ -0.11
NPIPB3-212ENST00000543368 KRT27Q7Z3Y8 459 aa14.37□□□□□ -0.11
NPIPB3-212ENST00000543368 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
NPIPB3-212ENST00000543368 STRN4Q9NRL3 753 aa14.37□□□□□ -0.11
NPIPB3-212ENST00000543368 SPATA31A1Q5TZJ5 1347 aa14.37□□□□□ -0.11
NPIPB3-212ENST00000543368 SF3B2Q13435 895 aaKnown RBP14.36□□□□□ -0.11
NPIPB3-212ENST00000543368 FAM98CQ17RN3 349 aaKnown RBP14.36□□□□□ -0.11
NPIPB3-212ENST00000543368 BARGINQ6ZT62 677 aa14.36□□□□□ -0.11
NPIPB3-212ENST00000543368 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
NPIPB3-212ENST00000543368 PIK3C2AO00443 1686 aa14.35□□□□□ -0.11
NPIPB3-212ENST00000543368 CD163L1Q9NR16 1453 aa14.34□□□□□ -0.11
NPIPB3-212ENST00000543368 C11orf95C9JLR9 678 aaPredicted RBP14.34□□□□□ -0.11
NPIPB3-212ENST00000543368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.34□□□□□ -0.11
NPIPB3-212ENST00000543368 TCP11L2Q8N4U5 519 aa14.34□□□□□ -0.11
NPIPB3-212ENST00000543368 ABCC6O95255 1503 aa14.34□□□□□ -0.11
NPIPB3-212ENST00000543368 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
NPIPB3-212ENST00000543368 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
NPIPB3-212ENST00000543368 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.11
NPIPB3-212ENST00000543368 LMO7Q8WWI1 1683 aa14.33□□□□□ -0.11
NPIPB3-212ENST00000543368 ARHGEF25Q86VW2 580 aa14.33□□□□□ -0.12
NPIPB3-212ENST00000543368 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.12
NPIPB3-212ENST00000543368 COL5A2P05997 1499 aaPredicted RBP14.32□□□□□ -0.12
NPIPB3-212ENST00000543368 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
NPIPB3-212ENST00000543368 CRB1P82279 1406 aa14.32□□□□□ -0.12
NPIPB3-212ENST00000543368 USP54Q70EL1 1684 aa14.31□□□□□ -0.12
NPIPB3-212ENST00000543368 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.12
NPIPB3-212ENST00000543368 LARP1Q6PKG0 1096 aaKnown RBP14.31□□□□□ -0.12
NPIPB3-212ENST00000543368 CDCA7Q9BWT1 371 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms