RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 EID1Q9Y6B2 187 aa26.81■■□□□ 1.88
ME3-212ENST00000543262 EDC4Q6P2E9 1401 aaKnown RBP26.8■■□□□ 1.88
ME3-212ENST00000543262 ADGRB2O60241 1585 aa26.8■■□□□ 1.88
ME3-212ENST00000543262 PNPLA6Q8IY17 1366 aa26.8■■□□□ 1.88
ME3-212ENST00000543262 BCAR3O75815 825 aa26.8■■□□□ 1.88
ME3-212ENST00000543262 NCBP3Q53F19 620 aaKnown RBP26.8■■□□□ 1.88
ME3-212ENST00000543262 SLC26A8Q96RN1 970 aa26.79■■□□□ 1.88
ME3-212ENST00000543262 PLEKHF1Q96S99 279 aa26.79■■□□□ 1.88
ME3-212ENST00000543262 CDC42BPGQ6DT37 1551 aa26.79■■□□□ 1.88
ME3-212ENST00000543262 DIAPH1O60610 1272 aaKnown RBP26.78■■□□□ 1.88
ME3-212ENST00000543262 SLIT1O75093 1534 aa26.78■■□□□ 1.88
ME3-212ENST00000543262 FBLN1P23142 703 aa26.77■■□□□ 1.88
ME3-212ENST00000543262 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.77■■□□□ 1.88
ME3-212ENST00000543262 MAP2P11137 1827 aaKnown RBP26.76■■□□□ 1.88
ME3-212ENST00000543262 ARHGAP23Q9P227 1491 aa26.76■■□□□ 1.87
ME3-212ENST00000543262 MON2Q7Z3U7 1717 aa26.76■■□□□ 1.87
ME3-212ENST00000543262 PRR36Q9H6K5 1346 aa26.76■■□□□ 1.87
ME3-212ENST00000543262 NME9Q86XW9 330 aa26.76■■□□□ 1.87
ME3-212ENST00000543262 POLKQ9UBT6 870 aa26.76■■□□□ 1.87
ME3-212ENST00000543262 AKAP12Q02952 1782 aa26.75■■□□□ 1.87
ME3-212ENST00000543262 PTPRUQ92729 1446 aa26.74■■□□□ 1.87
ME3-212ENST00000543262 ITSN1Q15811 1721 aa26.74■■□□□ 1.87
ME3-212ENST00000543262 PPM1GO15355 546 aaPredicted RBP26.73■■□□□ 1.87
ME3-212ENST00000543262 THEMISQ8N1K5 641 aaPredicted RBP26.72■■□□□ 1.87
ME3-212ENST00000543262 ZRANB1Q9UGI0 708 aa26.72■■□□□ 1.87
ME3-212ENST00000543262 TMPOP42166 694 aaKnown RBP26.71■■□□□ 1.87
ME3-212ENST00000543262 FANCIQ9NVI1 1328 aa26.71■■□□□ 1.87
ME3-212ENST00000543262 MAPK8IP3Q9UPT6 1336 aa26.71■■□□□ 1.87
ME3-212ENST00000543262 ZNF692Q9BU19 519 aaPredicted RBP26.7■■□□□ 1.86
ME3-212ENST00000543262 TBX22Q9Y458 520 aa26.7■■□□□ 1.86
ME3-212ENST00000543262 MYH16Q9H6N6 1097 aa26.68■■□□□ 1.86
ME3-212ENST00000543262 AMOTL2Q9Y2J4 779 aa26.68■■□□□ 1.86
ME3-212ENST00000543262 PNNQ9H307 717 aaKnown RBP26.67■■□□□ 1.86
ME3-212ENST00000543262 COG3Q96JB2 828 aa26.67■■□□□ 1.86
ME3-212ENST00000543262 TRIM35Q9UPQ4 493 aa26.67■■□□□ 1.86
ME3-212ENST00000543262 EMILIN1Q9Y6C2 1016 aa26.67■■□□□ 1.86
ME3-212ENST00000543262 RARSP54136 660 aaKnown RBP26.66■■□□□ 1.86
ME3-212ENST00000543262 TOPAZ1Q8N9V7 1692 aa26.65■■□□□ 1.86
ME3-212ENST00000543262 NUTM2FA1L443 756 aa26.65■■□□□ 1.86
ME3-212ENST00000543262 FCHSD2O94868 740 aa26.65■■□□□ 1.86
ME3-212ENST00000543262 AATKQ6ZMQ8 1374 aa26.64■■□□□ 1.86
ME3-212ENST00000543262 TCERG1O14776 1098 aaKnown RBP26.64■■□□□ 1.85
ME3-212ENST00000543262 PDE3AQ14432 1141 aa26.63■■□□□ 1.85
ME3-212ENST00000543262 KDM2BQ8NHM5 1336 aa26.63■■□□□ 1.85
ME3-212ENST00000543262 RIPK4P57078 832 aa26.62■■□□□ 1.85
ME3-212ENST00000543262 ACEP12821 1306 aa26.62■■□□□ 1.85
ME3-212ENST00000543262 LRRC7Q96NW7 1537 aa26.62■■□□□ 1.85
ME3-212ENST00000543262 PLEKHG3A1L390 1219 aa26.62■■□□□ 1.85
ME3-212ENST00000543262 CANXP27824 592 aaKnown RBP26.62■■□□□ 1.85
ME3-212ENST00000543262 RSPH6AQ9H0K4 717 aa26.61■■□□□ 1.85
ME3-212ENST00000543262 CDK12Q9NYV4 1490 aaPredicted RBP26.61■■□□□ 1.85
ME3-212ENST00000543262 DIP2AQ14689 1571 aa26.6■■□□□ 1.85
ME3-212ENST00000543262 PRKAR2BP31323 418 aa26.6■■□□□ 1.85
ME3-212ENST00000543262 FRAT1Q92837 279 aaPredicted RBP26.6■■□□□ 1.85
ME3-212ENST00000543262 TSR2Q969E8 191 aaKnown RBP26.59■■□□□ 1.85
ME3-212ENST00000543262 PTCH1Q13635 1447 aa26.59■■□□□ 1.85
ME3-212ENST00000543262 NRKQ7Z2Y5 1582 aa26.59■■□□□ 1.85
ME3-212ENST00000543262 IL13P35225 146 aa26.59■■□□□ 1.85
ME3-212ENST00000543262 RRS1Q15050 365 aaKnown RBP26.59■■□□□ 1.85
ME3-212ENST00000543262 CENPQQ7L2Z9 268 aaPredicted RBP26.59■■□□□ 1.85
ME3-212ENST00000543262 TTC21BQ7Z4L5 1316 aa26.59■■□□□ 1.85
ME3-212ENST00000543262 RIMS1Q86UR5 1692 aaKnown RBP26.57■■□□□ 1.84
ME3-212ENST00000543262 PANK1Q8TE04 598 aa26.57■■□□□ 1.84
ME3-212ENST00000543262 CEP170BQ9Y4F5 1589 aaPredicted RBP26.57■■□□□ 1.84
ME3-212ENST00000543262 IL16Q14005 1332 aa26.56■■□□□ 1.84
ME3-212ENST00000543262 MSH5O43196 834 aa26.56■■□□□ 1.84
ME3-212ENST00000543262 HMOX1P09601 288 aa26.56■■□□□ 1.84
ME3-212ENST00000543262 SKAP1Q86WV1 359 aa26.55■■□□□ 1.84
ME3-212ENST00000543262 BCL2L13Q9BXK5 485 aa26.55■■□□□ 1.84
ME3-212ENST00000543262 USP6P35125 1406 aa26.55■■□□□ 1.84
ME3-212ENST00000543262 NEFMP07197 916 aa26.54■■□□□ 1.84
ME3-212ENST00000543262 MS4A1P11836 297 aa26.54■■□□□ 1.84
ME3-212ENST00000543262 XRN1Q8IZH2 1706 aaKnown RBP26.54■■□□□ 1.84
ME3-212ENST00000543262 PHACTR3Q96KR7 559 aa26.54■■□□□ 1.84
ME3-212ENST00000543262 COG6Q9Y2V7 657 aa26.54■■□□□ 1.84
ME3-212ENST00000543262 EXOSC9Q06265 439 aaKnown RBP26.53■■□□□ 1.84
ME3-212ENST00000543262 CT47B1P0C2W7 299 aaPredicted RBP26.53■■□□□ 1.84
ME3-212ENST00000543262 RGPD8O14715 1765 aaPredicted RBP26.52■■□□□ 1.84
ME3-212ENST00000543262 NFE2L2Q16236 605 aa26.49■■□□□ 1.83
ME3-212ENST00000543262 PMFBP1Q8TBY8 1022 aa26.49■■□□□ 1.83
ME3-212ENST00000543262 OVOS2A0A0J9YW53 1432 aa26.49■■□□□ 1.83
ME3-212ENST00000543262 OVOS2Q6IE36 1432 aa26.49■■□□□ 1.83
ME3-212ENST00000543262 TNNQ9UQP3 1299 aa26.49■■□□□ 1.83
ME3-212ENST00000543262 KCNA6P17658 529 aa26.48■■□□□ 1.83
ME3-212ENST00000543262 PDE4AP27815 886 aa26.48■■□□□ 1.83
ME3-212ENST00000543262 SSH2Q76I76 1423 aa26.48■■□□□ 1.83
ME3-212ENST00000543262 RLBP1P12271 317 aa26.47■■□□□ 1.83
ME3-212ENST00000543262 CLUAP1Q96AJ1 413 aa26.47■■□□□ 1.83
ME3-212ENST00000543262 NALCNQ8IZF0 1738 aa26.46■■□□□ 1.83
ME3-212ENST00000543262 PIK3R4Q99570 1358 aa26.45■■□□□ 1.83
ME3-212ENST00000543262 BACH2Q9BYV9 841 aa26.44■■□□□ 1.82
ME3-212ENST00000543262 NGDNQ8NEJ9 315 aaKnown RBP26.44■■□□□ 1.82
ME3-212ENST00000543262 IGHDP01880 384 aa26.43■■□□□ 1.82
ME3-212ENST00000543262 SMC4Q9NTJ3 1288 aa26.43■■□□□ 1.82
ME3-212ENST00000543262 USP31Q70CQ4 1352 aa26.42■■□□□ 1.82
ME3-212ENST00000543262 TTC21AQ8NDW8 1320 aa26.42■■□□□ 1.82
ME3-212ENST00000543262 ANKLE2Q86XL3 938 aa26.42■■□□□ 1.82
ME3-212ENST00000543262 SSH1Q8WYL5 1049 aa26.42■■□□□ 1.82
ME3-212ENST00000543262 EIF4A2Q14240 407 aaKnown RBP26.42■■□□□ 1.82
ME3-212ENST00000543262 ZKSCAN2Q63HK3 967 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms