RNA–Protein interactions for RNA: ENST00000543259.1

C12orf56-206, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 4

Gene C12orf56, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-206ENST00000543259 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
C12orf56-206ENST00000543259 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
C12orf56-206ENST00000543259 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
C12orf56-206ENST00000543259 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
C12orf56-206ENST00000543259 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
C12orf56-206ENST00000543259 TRPM1Q7Z4N2 1603 aa17.05■□□□□ 0.32
C12orf56-206ENST00000543259 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
C12orf56-206ENST00000543259 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
C12orf56-206ENST00000543259 LRP5O75197 1615 aa17.04■□□□□ 0.32
C12orf56-206ENST00000543259 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
C12orf56-206ENST00000543259 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
C12orf56-206ENST00000543259 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
C12orf56-206ENST00000543259 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
C12orf56-206ENST00000543259 PHRF1Q9P1Y6 1649 aaKnown RBP17.03■□□□□ 0.32
C12orf56-206ENST00000543259 NBPF1Q3BBV0 1214 aa17.03■□□□□ 0.32
C12orf56-206ENST00000543259 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
C12orf56-206ENST00000543259 NEUROD1Q13562 356 aa17.02■□□□□ 0.32
C12orf56-206ENST00000543259 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
C12orf56-206ENST00000543259 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
C12orf56-206ENST00000543259 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.31
C12orf56-206ENST00000543259 SIN3AQ96ST3 1273 aa17.01■□□□□ 0.31
C12orf56-206ENST00000543259 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
C12orf56-206ENST00000543259 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
C12orf56-206ENST00000543259 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
C12orf56-206ENST00000543259 FAM83GA6ND36 823 aa17■□□□□ 0.31
C12orf56-206ENST00000543259 DEFB132Q7Z7B7 95 aa17■□□□□ 0.31
C12orf56-206ENST00000543259 TONSLQ96HA7 1378 aa17■□□□□ 0.31
C12orf56-206ENST00000543259 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
C12orf56-206ENST00000543259 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
C12orf56-206ENST00000543259 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
C12orf56-206ENST00000543259 KRT27Q7Z3Y8 459 aa16.98■□□□□ 0.31
C12orf56-206ENST00000543259 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
C12orf56-206ENST00000543259 PLEKHG3A1L390 1219 aa16.97■□□□□ 0.31
C12orf56-206ENST00000543259 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
C12orf56-206ENST00000543259 CCDC9Q9Y3X0 531 aaKnown RBP16.96■□□□□ 0.31
C12orf56-206ENST00000543259 PPIP5K1Q6PFW1 1433 aa16.96■□□□□ 0.3
C12orf56-206ENST00000543259 BTG4Q9NY30 223 aa16.95■□□□□ 0.3
C12orf56-206ENST00000543259 ACEP12821 1306 aa16.95■□□□□ 0.3
C12orf56-206ENST00000543259 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
C12orf56-206ENST00000543259 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
C12orf56-206ENST00000543259 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
C12orf56-206ENST00000543259 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
C12orf56-206ENST00000543259 SPATA31A5Q5VU36 1347 aa16.93■□□□□ 0.3
C12orf56-206ENST00000543259 SPATA31A7Q8IWB4 1347 aa16.93■□□□□ 0.3
C12orf56-206ENST00000543259 SBNO2Q9Y2G9 1366 aa16.92■□□□□ 0.3
C12orf56-206ENST00000543259 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
C12orf56-206ENST00000543259 LMO7Q8WWI1 1683 aa16.91■□□□□ 0.3
C12orf56-206ENST00000543259 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
C12orf56-206ENST00000543259 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
C12orf56-206ENST00000543259 KIAA0232Q92628 1395 aa16.89■□□□□ 0.3
C12orf56-206ENST00000543259 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.29
C12orf56-206ENST00000543259 A0A0G2JS52 829 aa16.88■□□□□ 0.29
C12orf56-206ENST00000543259 MYT1Q01538 1121 aa16.88■□□□□ 0.29
C12orf56-206ENST00000543259 ABTB2Q8N961 1025 aa16.88■□□□□ 0.29
C12orf56-206ENST00000543259 RREB1Q92766 1687 aa16.88■□□□□ 0.29
C12orf56-206ENST00000543259 USP6P35125 1406 aa16.87■□□□□ 0.29
C12orf56-206ENST00000543259 BAG6P46379 1132 aa16.87■□□□□ 0.29
C12orf56-206ENST00000543259 NLRP13Q86W25 1043 aa16.87■□□□□ 0.29
C12orf56-206ENST00000543259 USP19O94966 1318 aa16.86■□□□□ 0.29
C12orf56-206ENST00000543259 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
C12orf56-206ENST00000543259 CAMTA1Q9Y6Y1 1673 aa16.85■□□□□ 0.29
C12orf56-206ENST00000543259 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
C12orf56-206ENST00000543259 FAM182BQ5T319 152 aa16.85■□□□□ 0.29
C12orf56-206ENST00000543259 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
C12orf56-206ENST00000543259 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
C12orf56-206ENST00000543259 CPDO75976 1380 aa16.85■□□□□ 0.29
C12orf56-206ENST00000543259 SSH2Q76I76 1423 aa16.84■□□□□ 0.29
C12orf56-206ENST00000543259 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
C12orf56-206ENST00000543259 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
C12orf56-206ENST00000543259 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
C12orf56-206ENST00000543259 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
C12orf56-206ENST00000543259 AKAP12Q02952 1782 aa16.82■□□□□ 0.28
C12orf56-206ENST00000543259 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
C12orf56-206ENST00000543259 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
C12orf56-206ENST00000543259 TTC21AQ8NDW8 1320 aa16.81■□□□□ 0.28
C12orf56-206ENST00000543259 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
C12orf56-206ENST00000543259 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
C12orf56-206ENST00000543259 SLIT3O75094 1523 aa16.8■□□□□ 0.28
C12orf56-206ENST00000543259 WNK3Q9BYP7 1800 aa16.8■□□□□ 0.28
C12orf56-206ENST00000543259 PEAK1Q9H792 1746 aa16.79■□□□□ 0.28
C12orf56-206ENST00000543259 PIK3C2AO00443 1686 aa16.79■□□□□ 0.28
C12orf56-206ENST00000543259 GCP02774 474 aa16.79■□□□□ 0.28
C12orf56-206ENST00000543259 NLRP6P59044 892 aa16.79■□□□□ 0.28
C12orf56-206ENST00000543259 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
C12orf56-206ENST00000543259 COL5A2P05997 1499 aaPredicted RBP16.79■□□□□ 0.28
C12orf56-206ENST00000543259 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
C12orf56-206ENST00000543259 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
C12orf56-206ENST00000543259 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
C12orf56-206ENST00000543259 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
C12orf56-206ENST00000543259 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
C12orf56-206ENST00000543259 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.28
C12orf56-206ENST00000543259 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.28
C12orf56-206ENST00000543259 NINLQ9Y2I6 1382 aa16.77■□□□□ 0.28
C12orf56-206ENST00000543259 EVA1CP58658 441 aa16.77■□□□□ 0.28
C12orf56-206ENST00000543259 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
C12orf56-206ENST00000543259 COL18A1P39060 1754 aa16.77■□□□□ 0.27
C12orf56-206ENST00000543259 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
C12orf56-206ENST00000543259 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
C12orf56-206ENST00000543259 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
C12orf56-206ENST00000543259 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms