RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 PHF23Q9BUL5 403 aaPredicted RBP25.77■■□□□ 1.72
COPS7A-216ENST00000543170 SSH2Q76I76 1423 aa25.77■■□□□ 1.72
COPS7A-216ENST00000543170 CDCA8Q53HL2 280 aa25.76■■□□□ 1.71
COPS7A-216ENST00000543170 MEX3CQ5U5Q3 659 aaKnown RBP25.76■■□□□ 1.71
COPS7A-216ENST00000543170 ZNF692Q9BU19 519 aaPredicted RBP25.76■■□□□ 1.71
COPS7A-216ENST00000543170 CD163L1Q9NR16 1453 aa25.76■■□□□ 1.71
COPS7A-216ENST00000543170 PAK3O75914 559 aaPredicted RBP25.73■■□□□ 1.71
COPS7A-216ENST00000543170 HSPA5P11021 654 aaKnown RBP25.73■■□□□ 1.71
COPS7A-216ENST00000543170 PHRF1Q9P1Y6 1649 aaKnown RBP25.73■■□□□ 1.71
COPS7A-216ENST00000543170 LMOD2Q6P5Q4 547 aa25.72■■□□□ 1.71
COPS7A-216ENST00000543170 MYOM1P52179 1685 aa25.71■■□□□ 1.71
COPS7A-216ENST00000543170 PIK3C2AO00443 1686 aa25.71■■□□□ 1.71
COPS7A-216ENST00000543170 KTN1Q86UP2 1357 aaKnown RBP25.69■■□□□ 1.7
COPS7A-216ENST00000543170 TMC1Q8TDI8 760 aa25.69■■□□□ 1.7
COPS7A-216ENST00000543170 HDGFL2Q7Z4V5 671 aaPredicted RBP25.68■■□□□ 1.7
COPS7A-216ENST00000543170 SLC12A5Q9H2X9 1139 aa25.68■■□□□ 1.7
COPS7A-216ENST00000543170 RGS17Q9UGC6 210 aaPredicted RBP25.68■■□□□ 1.7
COPS7A-216ENST00000543170 A0A1W2PP64 1363 aa25.68■■□□□ 1.7
COPS7A-216ENST00000543170 TTC21AQ8NDW8 1320 aa25.67■■□□□ 1.7
COPS7A-216ENST00000543170 ADAMTS2O95450 1211 aa25.67■■□□□ 1.7
COPS7A-216ENST00000543170 TERF2IPQ9NYB0 399 aa25.67■■□□□ 1.7
COPS7A-216ENST00000543170 USP54Q70EL1 1684 aa25.67■■□□□ 1.7
COPS7A-216ENST00000543170 ANKRD36BQ8N2N9 1353 aa25.67■■□□□ 1.7
COPS7A-216ENST00000543170 USP19O94966 1318 aa25.66■■□□□ 1.7
COPS7A-216ENST00000543170 EDC4Q6P2E9 1401 aaKnown RBP25.66■■□□□ 1.7
COPS7A-216ENST00000543170 TTC21BQ7Z4L5 1316 aa25.65■■□□□ 1.7
COPS7A-216ENST00000543170 ABTB2Q8N961 1025 aa25.65■■□□□ 1.7
COPS7A-216ENST00000543170 C8orf37Q96NL8 207 aa25.65■■□□□ 1.7
COPS7A-216ENST00000543170 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.64■■□□□ 1.7
COPS7A-216ENST00000543170 HAP1P54257 671 aaPredicted RBP25.64■■□□□ 1.7
COPS7A-216ENST00000543170 ZNF772Q68DY9 489 aaPredicted RBP25.64■■□□□ 1.7
COPS7A-216ENST00000543170 CABLES1Q8TDN4 633 aa25.64■■□□□ 1.7
COPS7A-216ENST00000543170 AFF2P51816 1311 aa25.63■■□□□ 1.69
COPS7A-216ENST00000543170 SLIT3O75094 1523 aa25.63■■□□□ 1.69
COPS7A-216ENST00000543170 NWD2Q9ULI1 1742 aa25.63■■□□□ 1.69
COPS7A-216ENST00000543170 NLRP13Q86W25 1043 aa25.62■■□□□ 1.69
COPS7A-216ENST00000543170 SLIT2O94813 1529 aa25.62■■□□□ 1.69
COPS7A-216ENST00000543170 PLCH1Q4KWH8 1693 aa25.61■■□□□ 1.69
COPS7A-216ENST00000543170 FNBP4Q8N3X1 1017 aaPredicted RBP25.61■■□□□ 1.69
COPS7A-216ENST00000543170 COL14A1Q05707 1796 aaKnown RBP25.61■■□□□ 1.69
COPS7A-216ENST00000543170 NGLY1Q96IV0 654 aa25.6■■□□□ 1.69
COPS7A-216ENST00000543170 USP31Q70CQ4 1352 aa25.58■■□□□ 1.69
COPS7A-216ENST00000543170 NUTM2GQ5VZR2 741 aa25.57■■□□□ 1.68
COPS7A-216ENST00000543170 BCL9LQ86UU0 1499 aa25.56■■□□□ 1.68
COPS7A-216ENST00000543170 NLRP6P59044 892 aa25.56■■□□□ 1.68
COPS7A-216ENST00000543170 CPDO75976 1380 aa25.56■■□□□ 1.68
COPS7A-216ENST00000543170 PLEKHG5O94827 1062 aa25.55■■□□□ 1.68
COPS7A-216ENST00000543170 POTEAQ6S8J7 498 aa25.55■■□□□ 1.68
COPS7A-216ENST00000543170 NRAPQ86VF7 1730 aa25.54■■□□□ 1.68
COPS7A-216ENST00000543170 USP21Q9UK80 565 aa25.54■■□□□ 1.68
COPS7A-216ENST00000543170 OVOS2A0A0J9YW53 1432 aa25.53■■□□□ 1.68
COPS7A-216ENST00000543170 ATRNO75882 1429 aa25.53■■□□□ 1.68
COPS7A-216ENST00000543170 OVOS2Q6IE36 1432 aa25.53■■□□□ 1.68
COPS7A-216ENST00000543170 GCP02774 474 aa25.52■■□□□ 1.68
COPS7A-216ENST00000543170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.52■■□□□ 1.68
COPS7A-216ENST00000543170 KIAA0232Q92628 1395 aa25.52■■□□□ 1.68
COPS7A-216ENST00000543170 NFAT5O94916 1531 aa25.51■■□□□ 1.67
COPS7A-216ENST00000543170 LMO7Q8WWI1 1683 aa25.51■■□□□ 1.67
COPS7A-216ENST00000543170 KIF20BQ96Q89 1820 aa25.51■■□□□ 1.67
COPS7A-216ENST00000543170 FAM83GA6ND36 823 aa25.5■■□□□ 1.67
COPS7A-216ENST00000543170 ILDR2Q71H61 639 aa25.49■■□□□ 1.67
COPS7A-216ENST00000543170 NME9Q86XW9 330 aa25.49■■□□□ 1.67
COPS7A-216ENST00000543170 KCNH5Q8NCM2 988 aa25.49■■□□□ 1.67
COPS7A-216ENST00000543170 PRDM11Q9NQV5 511 aa25.49■■□□□ 1.67
COPS7A-216ENST00000543170 TRPC5Q9UL62 973 aaPredicted RBP25.49■■□□□ 1.67
COPS7A-216ENST00000543170 C11orf95C9JLR9 678 aaPredicted RBP25.48■■□□□ 1.67
COPS7A-216ENST00000543170 UNC5CLQ8IV45 518 aa25.48■■□□□ 1.67
COPS7A-216ENST00000543170 ABCC6O95255 1503 aa25.47■■□□□ 1.67
COPS7A-216ENST00000543170 CDK12Q9NYV4 1490 aaPredicted RBP25.47■■□□□ 1.67
COPS7A-216ENST00000543170 KIF7Q2M1P5 1343 aa25.47■■□□□ 1.67
COPS7A-216ENST00000543170 NSD3Q9BZ95 1437 aa25.46■■□□□ 1.67
COPS7A-216ENST00000543170 ZC3H6P61129 1189 aaKnown RBP25.46■■□□□ 1.67
COPS7A-216ENST00000543170 QTRT2Q9H974 415 aaKnown RBP25.46■■□□□ 1.67
COPS7A-216ENST00000543170 POLR3GLQ9BT43 218 aa25.45■■□□□ 1.66
COPS7A-216ENST00000543170 COL18A1P39060 1754 aa25.44■■□□□ 1.66
COPS7A-216ENST00000543170 RXRBP28702 533 aa25.43■■□□□ 1.66
COPS7A-216ENST00000543170 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
COPS7A-216ENST00000543170 RBM6P78332 1123 aaKnown RBP25.43■■□□□ 1.66
COPS7A-216ENST00000543170 CARD14Q9BXL6 1004 aa25.43■■□□□ 1.66
COPS7A-216ENST00000543170 BTG4Q9NY30 223 aa25.43■■□□□ 1.66
COPS7A-216ENST00000543170 ZRANB1Q9UGI0 708 aa25.43■■□□□ 1.66
COPS7A-216ENST00000543170 AATKQ6ZMQ8 1374 aa25.42■■□□□ 1.66
COPS7A-216ENST00000543170 GLI3P10071 1580 aa25.41■■□□□ 1.66
COPS7A-216ENST00000543170 VPS72Q15906 364 aa25.41■■□□□ 1.66
COPS7A-216ENST00000543170 CAMTA1Q9Y6Y1 1673 aa25.41■■□□□ 1.66
COPS7A-216ENST00000543170 CCDC7Q96M83 1385 aa25.41■■□□□ 1.66
COPS7A-216ENST00000543170 LTN1O94822 1766 aa25.41■■□□□ 1.66
COPS7A-216ENST00000543170 CHRNA2Q15822 529 aa25.4■■□□□ 1.66
COPS7A-216ENST00000543170 COG3Q96JB2 828 aa25.4■■□□□ 1.66
COPS7A-216ENST00000543170 FYB1O15117 783 aa25.39■■□□□ 1.66
COPS7A-216ENST00000543170 ARHGEF25Q86VW2 580 aa25.39■■□□□ 1.66
COPS7A-216ENST00000543170 ANKRD26Q9UPS8 1709 aa25.39■■□□□ 1.65
COPS7A-216ENST00000543170 GJD4Q96KN9 370 aaPredicted RBP25.38■■□□□ 1.65
COPS7A-216ENST00000543170 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
COPS7A-216ENST00000543170 COL5A2P05997 1499 aaPredicted RBP25.37■■□□□ 1.65
COPS7A-216ENST00000543170 PANK3Q9H999 370 aa25.36■■□□□ 1.65
COPS7A-216ENST00000543170 RGS12O14924 1447 aa25.36■■□□□ 1.65
COPS7A-216ENST00000543170 WASHC2AQ641Q2 1341 aa25.36■■□□□ 1.65
COPS7A-216ENST00000543170 NSD2O96028 1365 aa25.33■■□□□ 1.65
COPS7A-216ENST00000543170 SOX12O15370 315 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms