RNA–Protein interactions for RNA: ENST00000543128.5

CCDC189-205, Transcript of coiled-coil domain containing 189, humanhuman

TSL 1 (best)

Gene CCDC189, Length 1,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-205ENST00000543128 U2AF1Q01081 240 aaKnown RBP eCLIP28.4■■■□□ 2.14
CCDC189-205ENST00000543128 WDR63Q8IWG1 891 aa28.39■■■□□ 2.14
CCDC189-205ENST00000543128 PPIP5K1Q6PFW1 1433 aa28.39■■■□□ 2.13
CCDC189-205ENST00000543128 PNPLA6Q8IY17 1366 aa28.38■■■□□ 2.13
CCDC189-205ENST00000543128 C20orf194Q5TEA3 1177 aa28.38■■■□□ 2.13
CCDC189-205ENST00000543128 EDC4Q6P2E9 1401 aaKnown RBP28.37■■■□□ 2.13
CCDC189-205ENST00000543128 RRP7AQ9Y3A4 280 aaKnown RBP28.36■■■□□ 2.13
CCDC189-205ENST00000543128 CDC42BPGQ6DT37 1551 aa28.36■■■□□ 2.13
CCDC189-205ENST00000543128 NEUROD2Q15784 382 aa28.35■■■□□ 2.13
CCDC189-205ENST00000543128 NUDT16Q96DE0 195 aaKnown RBP28.35■■■□□ 2.13
CCDC189-205ENST00000543128 ROBO2Q9HCK4 1378 aa28.34■■■□□ 2.13
CCDC189-205ENST00000543128 MON2Q7Z3U7 1717 aa28.33■■■□□ 2.13
CCDC189-205ENST00000543128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.33■■■□□ 2.13
CCDC189-205ENST00000543128 CCDC61Q9Y6R9 512 aa28.33■■■□□ 2.13
CCDC189-205ENST00000543128 FANCIQ9NVI1 1328 aa28.33■■■□□ 2.13
CCDC189-205ENST00000543128 ANKLE2Q86XL3 938 aa28.32■■■□□ 2.12
CCDC189-205ENST00000543128 PLEKHF1Q96S99 279 aa28.32■■■□□ 2.12
CCDC189-205ENST00000543128 AKAP12Q02952 1782 aa28.32■■■□□ 2.12
CCDC189-205ENST00000543128 U2SURPO15042 1029 aaKnown RBP28.29■■■□□ 2.12
CCDC189-205ENST00000543128 DIAPH1O60610 1272 aaKnown RBP28.29■■■□□ 2.12
CCDC189-205ENST00000543128 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.29■■■□□ 2.12
CCDC189-205ENST00000543128 ITSN1Q15811 1721 aa28.29■■■□□ 2.12
CCDC189-205ENST00000543128 TBX22Q9Y458 520 aa28.28■■■□□ 2.12
CCDC189-205ENST00000543128 MAP2P11137 1827 aaKnown RBP28.27■■■□□ 2.12
CCDC189-205ENST00000543128 BCAR3O75815 825 aa28.27■■■□□ 2.12
CCDC189-205ENST00000543128 SLC26A8Q96RN1 970 aa28.27■■■□□ 2.12
CCDC189-205ENST00000543128 POLKQ9UBT6 870 aa28.26■■■□□ 2.11
CCDC189-205ENST00000543128 PRR36Q9H6K5 1346 aa28.26■■■□□ 2.11
CCDC189-205ENST00000543128 DIP2AQ14689 1571 aa28.25■■■□□ 2.11
CCDC189-205ENST00000543128 PTPRUQ92729 1446 aa28.25■■■□□ 2.11
CCDC189-205ENST00000543128 ZNF692Q9BU19 519 aaPredicted RBP28.25■■■□□ 2.11
CCDC189-205ENST00000543128 PNNQ9H307 717 aaKnown RBP28.25■■■□□ 2.11
CCDC189-205ENST00000543128 TOPAZ1Q8N9V7 1692 aa28.23■■■□□ 2.11
CCDC189-205ENST00000543128 NCKAP5LQ9HCH0 1330 aa28.23■■■□□ 2.11
CCDC189-205ENST00000543128 TMPOP42166 694 aaKnown RBP28.22■■■□□ 2.11
CCDC189-205ENST00000543128 MYH16Q9H6N6 1097 aa28.22■■■□□ 2.11
CCDC189-205ENST00000543128 AATKQ6ZMQ8 1374 aa28.22■■■□□ 2.11
CCDC189-205ENST00000543128 TCERG1O14776 1098 aaKnown RBP28.22■■■□□ 2.11
CCDC189-205ENST00000543128 NME9Q86XW9 330 aa28.22■■■□□ 2.11
CCDC189-205ENST00000543128 MAPK8IP3Q9UPT6 1336 aa28.22■■■□□ 2.11
CCDC189-205ENST00000543128 PDE3AQ14432 1141 aa28.2■■■□□ 2.1
CCDC189-205ENST00000543128 FCHSD2O94868 740 aa28.19■■■□□ 2.1
CCDC189-205ENST00000543128 KDM2BQ8NHM5 1336 aa28.19■■■□□ 2.1
CCDC189-205ENST00000543128 CDK12Q9NYV4 1490 aaPredicted RBP28.18■■■□□ 2.1
CCDC189-205ENST00000543128 RARSP54136 660 aaKnown RBP28.18■■■□□ 2.1
CCDC189-205ENST00000543128 TRIM35Q9UPQ4 493 aa28.18■■■□□ 2.1
CCDC189-205ENST00000543128 FBLN1P23142 703 aa28.17■■■□□ 2.1
CCDC189-205ENST00000543128 COG3Q96JB2 828 aa28.16■■■□□ 2.1
CCDC189-205ENST00000543128 PTCH1Q13635 1447 aa28.16■■■□□ 2.1
CCDC189-205ENST00000543128 NRKQ7Z2Y5 1582 aa28.16■■■□□ 2.1
CCDC189-205ENST00000543128 PLEKHG3A1L390 1219 aa28.15■■■□□ 2.1
CCDC189-205ENST00000543128 NPHP4O75161 1426 aaPredicted RBP28.15■■■□□ 2.1
CCDC189-205ENST00000543128 LRRC7Q96NW7 1537 aa28.15■■■□□ 2.1
CCDC189-205ENST00000543128 IL16Q14005 1332 aa28.15■■■□□ 2.1
CCDC189-205ENST00000543128 PIK3R4Q99570 1358 aa28.15■■■□□ 2.1
CCDC189-205ENST00000543128 ZRANB1Q9UGI0 708 aa28.15■■■□□ 2.1
CCDC189-205ENST00000543128 AMOTL2Q9Y2J4 779 aa28.15■■■□□ 2.1
CCDC189-205ENST00000543128 CENPQQ7L2Z9 268 aaPredicted RBP28.14■■■□□ 2.1
CCDC189-205ENST00000543128 PPM1GO15355 546 aaPredicted RBP28.13■■■□□ 2.09
CCDC189-205ENST00000543128 MS4A1P11836 297 aa28.13■■■□□ 2.09
CCDC189-205ENST00000543128 CT47B1P0C2W7 299 aaPredicted RBP28.13■■■□□ 2.09
CCDC189-205ENST00000543128 RSPH6AQ9H0K4 717 aa28.13■■■□□ 2.09
CCDC189-205ENST00000543128 EMILIN1Q9Y6C2 1016 aa28.13■■■□□ 2.09
CCDC189-205ENST00000543128 RIPK4P57078 832 aa28.11■■■□□ 2.09
CCDC189-205ENST00000543128 LMTK3Q96Q04 1460 aa28.1■■■□□ 2.09
CCDC189-205ENST00000543128 IL13P35225 146 aa28.1■■■□□ 2.09
CCDC189-205ENST00000543128 XRN1Q8IZH2 1706 aaKnown RBP28.1■■■□□ 2.09
CCDC189-205ENST00000543128 ACEP12821 1306 aa28.09■■■□□ 2.09
CCDC189-205ENST00000543128 TTC21BQ7Z4L5 1316 aa28.09■■■□□ 2.09
CCDC189-205ENST00000543128 CANXP27824 592 aaKnown RBP28.08■■■□□ 2.09
CCDC189-205ENST00000543128 MSH5O43196 834 aa28.08■■■□□ 2.09
CCDC189-205ENST00000543128 USP6P35125 1406 aa28.07■■■□□ 2.08
CCDC189-205ENST00000543128 PRKAR2BP31323 418 aa28.07■■■□□ 2.08
CCDC189-205ENST00000543128 HSPA2P54652 639 aa28.06■■■□□ 2.08
CCDC189-205ENST00000543128 NEFMP07197 916 aa28.06■■■□□ 2.08
CCDC189-205ENST00000543128 FRAT1Q92837 279 aaPredicted RBP28.04■■■□□ 2.08
CCDC189-205ENST00000543128 PANK1Q8TE04 598 aa28.04■■■□□ 2.08
CCDC189-205ENST00000543128 TSR2Q969E8 191 aaKnown RBP28.04■■■□□ 2.08
CCDC189-205ENST00000543128 OVOS2A0A0J9YW53 1432 aa28.04■■■□□ 2.08
CCDC189-205ENST00000543128 OVOS2Q6IE36 1432 aa28.04■■■□□ 2.08
CCDC189-205ENST00000543128 SSH2Q76I76 1423 aa28.03■■■□□ 2.08
CCDC189-205ENST00000543128 NALCNQ8IZF0 1738 aa28.03■■■□□ 2.08
CCDC189-205ENST00000543128 AAMPQ13685 434 aa28.02■■■□□ 2.08
CCDC189-205ENST00000543128 RRS1Q15050 365 aaKnown RBP28.02■■■□□ 2.08
CCDC189-205ENST00000543128 NUTM2FA1L443 756 aa28.02■■■□□ 2.08
CCDC189-205ENST00000543128 KCNA6P17658 529 aa28.01■■■□□ 2.07
CCDC189-205ENST00000543128 EXOSC9Q06265 439 aaKnown RBP28.01■■■□□ 2.07
CCDC189-205ENST00000543128 NFE2L2Q16236 605 aa28.01■■■□□ 2.07
CCDC189-205ENST00000543128 COG6Q9Y2V7 657 aa28.01■■■□□ 2.07
CCDC189-205ENST00000543128 PDE4AP27815 886 aa28■■■□□ 2.07
CCDC189-205ENST00000543128 HMOX1P09601 288 aa27.99■■■□□ 2.07
CCDC189-205ENST00000543128 CHD2O14647 1828 aaKnown RBP27.99■■■□□ 2.07
CCDC189-205ENST00000543128 CLUAP1Q96AJ1 413 aa27.99■■■□□ 2.07
CCDC189-205ENST00000543128 PHACTR3Q96KR7 559 aa27.99■■■□□ 2.07
CCDC189-205ENST00000543128 BCL2L13Q9BXK5 485 aa27.98■■■□□ 2.07
CCDC189-205ENST00000543128 BACH2Q9BYV9 841 aa27.98■■■□□ 2.07
CCDC189-205ENST00000543128 RGPD8O14715 1765 aaPredicted RBP27.98■■■□□ 2.07
CCDC189-205ENST00000543128 USP31Q70CQ4 1352 aa27.97■■■□□ 2.07
CCDC189-205ENST00000543128 TTC21AQ8NDW8 1320 aa27.97■■■□□ 2.07
CCDC189-205ENST00000543128 ANP32EQ9BTT0 268 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms