RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.3■■□□□ 1
KDM2B-216ENST00000543025 NRXN3Q9Y4C0 1643 aa21.3■■□□□ 1
KDM2B-216ENST00000543025 NCBP3Q53F19 620 aaKnown RBP21.29■■□□□ 1
KDM2B-216ENST00000543025 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
KDM2B-216ENST00000543025 ARHGEF28Q8N1W1 1705 aaKnown RBP21.29■■□□□ 1
KDM2B-216ENST00000543025 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
KDM2B-216ENST00000543025 TULP4Q9NRJ4 1543 aa21.28■■□□□ 1
KDM2B-216ENST00000543025 LTKP29376 864 aa21.28■■□□□ 1
KDM2B-216ENST00000543025 GSE1Q14687 1217 aa21.27■■□□□ 1
KDM2B-216ENST00000543025 SETD1AO15047 1707 aaKnown RBP21.27■■□□□ 1
KDM2B-216ENST00000543025 HDGFP51858 240 aaKnown RBP21.27■■□□□ 1
KDM2B-216ENST00000543025 MYH16Q9H6N6 1097 aa21.26■□□□□ 0.99
KDM2B-216ENST00000543025 ALKQ9UM73 1620 aa21.26■□□□□ 0.99
KDM2B-216ENST00000543025 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
KDM2B-216ENST00000543025 USP19O94966 1318 aa21.25■□□□□ 0.99
KDM2B-216ENST00000543025 EID1Q9Y6B2 187 aa21.24■□□□□ 0.99
KDM2B-216ENST00000543025 ADGRB2O60241 1585 aa21.24■□□□□ 0.99
KDM2B-216ENST00000543025 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
KDM2B-216ENST00000543025 RLBP1P12271 317 aa21.23■□□□□ 0.99
KDM2B-216ENST00000543025 LMTK3Q96Q04 1460 aa21.23■□□□□ 0.99
KDM2B-216ENST00000543025 U2AF1L5P0DN76 240 aaPredicted RBP21.22■□□□□ 0.99
KDM2B-216ENST00000543025 U2AF1Q01081 240 aaKnown RBP eCLIP21.22■□□□□ 0.99
KDM2B-216ENST00000543025 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
KDM2B-216ENST00000543025 PCDHB15Q9Y5E8 787 aa21.22■□□□□ 0.99
KDM2B-216ENST00000543025 TNNQ9UQP3 1299 aa21.2■□□□□ 0.98
KDM2B-216ENST00000543025 SEC24BO95487 1268 aa21.2■□□□□ 0.98
KDM2B-216ENST00000543025 CABP2Q9NPB3 220 aa21.2■□□□□ 0.98
KDM2B-216ENST00000543025 IL27Q8NEV9 243 aa21.19■□□□□ 0.98
KDM2B-216ENST00000543025 ADAMTS13Q76LX8 1427 aa21.18■□□□□ 0.98
KDM2B-216ENST00000543025 CT47B1P0C2W7 299 aaPredicted RBP21.18■□□□□ 0.98
KDM2B-216ENST00000543025 RWDD1Q9H446 243 aaPredicted RBP21.18■□□□□ 0.98
KDM2B-216ENST00000543025 ABCC11Q96J66 1382 aa21.18■□□□□ 0.98
KDM2B-216ENST00000543025 ANKLE2Q86XL3 938 aa21.18■□□□□ 0.98
KDM2B-216ENST00000543025 BECN1Q14457 450 aa21.17■□□□□ 0.98
KDM2B-216ENST00000543025 A0A1W2PP64 1363 aa21.17■□□□□ 0.98
KDM2B-216ENST00000543025 FRAT2O75474 233 aaPredicted RBP21.17■□□□□ 0.98
KDM2B-216ENST00000543025 MVPQ14764 893 aaKnown RBP21.17■□□□□ 0.98
KDM2B-216ENST00000543025 ZKSCAN2Q63HK3 967 aa21.16■□□□□ 0.98
KDM2B-216ENST00000543025 PDZRN3Q9UPQ7 1066 aa21.16■□□□□ 0.98
KDM2B-216ENST00000543025 MED14O60244 1454 aa21.16■□□□□ 0.98
KDM2B-216ENST00000543025 UPF2Q9HAU5 1272 aaKnown RBP21.15■□□□□ 0.98
KDM2B-216ENST00000543025 DIP2AQ14689 1571 aa21.15■□□□□ 0.98
KDM2B-216ENST00000543025 HSPA2P54652 639 aa21.14■□□□□ 0.98
KDM2B-216ENST00000543025 SAFB2Q14151 953 aaKnown RBP eCLIP21.14■□□□□ 0.97
KDM2B-216ENST00000543025 FTSJ3Q8IY81 847 aaKnown RBP21.14■□□□□ 0.97
KDM2B-216ENST00000543025 SRPK2P78362 688 aaKnown RBP21.13■□□□□ 0.97
KDM2B-216ENST00000543025 DZIP1LQ8IYY4 767 aaKnown RBP21.13■□□□□ 0.97
KDM2B-216ENST00000543025 PLEKHF1Q96S99 279 aa21.13■□□□□ 0.97
KDM2B-216ENST00000543025 METP08581 1390 aa21.13■□□□□ 0.97
KDM2B-216ENST00000543025 NCKAP5LQ9HCH0 1330 aa21.12■□□□□ 0.97
KDM2B-216ENST00000543025 COL3A1P02461 1466 aaPredicted RBP21.12■□□□□ 0.97
KDM2B-216ENST00000543025 NPHP4O75161 1426 aaPredicted RBP21.11■□□□□ 0.97
KDM2B-216ENST00000543025 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
KDM2B-216ENST00000543025 ATAD2Q6PL18 1390 aa21.11■□□□□ 0.97
KDM2B-216ENST00000543025 SLC26A8Q96RN1 970 aa21.11■□□□□ 0.97
KDM2B-216ENST00000543025 U2SURPO15042 1029 aaKnown RBP21.11■□□□□ 0.97
KDM2B-216ENST00000543025 TSR2Q969E8 191 aaKnown RBP21.11■□□□□ 0.97
KDM2B-216ENST00000543025 TMPOP42166 694 aaKnown RBP21.1■□□□□ 0.97
KDM2B-216ENST00000543025 GGNBP2Q9H3C7 697 aa21.1■□□□□ 0.97
KDM2B-216ENST00000543025 ANKRD26Q9UPS8 1709 aa21.1■□□□□ 0.97
KDM2B-216ENST00000543025 TBC1D32Q96NH3 1257 aa21.09■□□□□ 0.97
KDM2B-216ENST00000543025 SMC4Q9NTJ3 1288 aa21.09■□□□□ 0.97
KDM2B-216ENST00000543025 STK26Q9P289 416 aa21.09■□□□□ 0.97
KDM2B-216ENST00000543025 STRCQ7RTU9 1775 aa21.09■□□□□ 0.97
KDM2B-216ENST00000543025 KNDC1Q76NI1 1749 aa21.09■□□□□ 0.97
KDM2B-216ENST00000543025 TERF2IPQ9NYB0 399 aa21.09■□□□□ 0.97
KDM2B-216ENST00000543025 EXOSC9Q06265 439 aaKnown RBP21.08■□□□□ 0.97
KDM2B-216ENST00000543025 TRIM35Q9UPQ4 493 aa21.08■□□□□ 0.96
KDM2B-216ENST00000543025 TBX22Q9Y458 520 aa21.07■□□□□ 0.96
KDM2B-216ENST00000543025 IL16Q14005 1332 aa21.07■□□□□ 0.96
KDM2B-216ENST00000543025 FYB1O15117 783 aa21.06■□□□□ 0.96
KDM2B-216ENST00000543025 TRIM27P14373 513 aa21.06■□□□□ 0.96
KDM2B-216ENST00000543025 DDX19BQ9UMR2 479 aa21.06■□□□□ 0.96
KDM2B-216ENST00000543025 CD163L1Q9NR16 1453 aa21.05■□□□□ 0.96
KDM2B-216ENST00000543025 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
KDM2B-216ENST00000543025 ATF7IPQ6VMQ6 1270 aa21.04■□□□□ 0.96
KDM2B-216ENST00000543025 SSH1Q8WYL5 1049 aa21.04■□□□□ 0.96
KDM2B-216ENST00000543025 DLC1Q96QB1 1528 aa21.04■□□□□ 0.96
KDM2B-216ENST00000543025 HDAC1Q13547 482 aaPredicted RBP21.04■□□□□ 0.96
KDM2B-216ENST00000543025 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
KDM2B-216ENST00000543025 RTN4Q9NQC3 1192 aaKnown RBP21.04■□□□□ 0.96
KDM2B-216ENST00000543025 BRPF3Q9ULD4 1205 aa21.04■□□□□ 0.96
KDM2B-216ENST00000543025 MINK1Q8N4C8 1332 aaPredicted RBP21.03■□□□□ 0.96
KDM2B-216ENST00000543025 CPS1P31327 1500 aa21.03■□□□□ 0.96
KDM2B-216ENST00000543025 XRN1Q8IZH2 1706 aaKnown RBP21.03■□□□□ 0.96
KDM2B-216ENST00000543025 SLKQ9H2G2 1235 aaPredicted RBP21.03■□□□□ 0.96
KDM2B-216ENST00000543025 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
KDM2B-216ENST00000543025 POGKQ9P215 609 aa21.03■□□□□ 0.96
KDM2B-216ENST00000543025 CHD2O14647 1828 aaKnown RBP21.03■□□□□ 0.96
KDM2B-216ENST00000543025 TECPR2O15040 1411 aa21.02■□□□□ 0.96
KDM2B-216ENST00000543025 ITPRIPQ8IWB1 547 aa21.02■□□□□ 0.96
KDM2B-216ENST00000543025 DIAPH1O60610 1272 aaKnown RBP21.02■□□□□ 0.95
KDM2B-216ENST00000543025 RIPK4P57078 832 aa21.02■□□□□ 0.95
KDM2B-216ENST00000543025 HDGFL2Q7Z4V5 671 aaPredicted RBP21.01■□□□□ 0.95
KDM2B-216ENST00000543025 ANTXR1Q9H6X2 564 aa21.01■□□□□ 0.95
KDM2B-216ENST00000543025 PNPLA6Q8IY17 1366 aa21.01■□□□□ 0.95
KDM2B-216ENST00000543025 TBC1D2Q9BYX2 928 aa21■□□□□ 0.95
KDM2B-216ENST00000543025 PIK3R4Q99570 1358 aa21■□□□□ 0.95
KDM2B-216ENST00000543025 NOB1Q9ULX3 412 aaKnown RBP21■□□□□ 0.95
KDM2B-216ENST00000543025 KIF16BQ96L93 1317 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms