RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 SIRT1Q96EB6 747 aa17.18■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 ADGRB2O60241 1585 aa17.17■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 TMEM132EQ6IEE7 984 aa17.17■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 CENPJQ9HC77 1338 aaPredicted RBP17.16■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 TESK2Q96S53 571 aa17.15■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
CACNA1C-IT3-201ENST00000542680 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 TMF1P82094 1093 aa17.12■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 CCDC7Q96M83 1385 aa17.12■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 PARD3Q8TEW0 1356 aa17.11■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 ABCA3Q99758 1704 aa17.1■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
CACNA1C-IT3-201ENST00000542680 THSD7AQ9UPZ6 1657 aa17.08■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 KCNQ2O43526 872 aa17.08■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 STK26Q9P289 416 aa17.08■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 FAM182BQ5T319 152 aa17.07■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 POGKQ9P215 609 aa17.07■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 A0A0G2JS52 829 aa17.06■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 MYT1Q01538 1121 aa17.06■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 TULP4Q9NRJ4 1543 aa17.05■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 C11orf95C9JLR9 678 aaPredicted RBP17.04■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 FOXO3O43524 673 aa17.04■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 MYOM1P52179 1685 aa17.04■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 SPATA31A3Q5VYP0 1347 aa17.03■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 CASZ1Q86V15 1759 aa17.03■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
CACNA1C-IT3-201ENST00000542680 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 GIGYF1O75420 1035 aaPredicted RBP17.01■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 TRIM37O94972 964 aa16.99■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 KIF1AQ12756 1690 aa16.98■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 GOLGB1Q14789 3259 aaKnown RBP16.97■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 APBA3O96018 575 aa16.97■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 DIEXFQ68CQ4 756 aaKnown RBP16.97■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
CACNA1C-IT3-201ENST00000542680 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 SAFB2Q14151 953 aaKnown RBP eCLIP16.95■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 ITSN1Q15811 1721 aa16.94■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 WASLO00401 505 aaPredicted RBP16.94■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 TNS3Q68CZ2 1445 aa16.94■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 TOPAZ1Q8N9V7 1692 aa16.93■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 POLR3GLQ9BT43 218 aa16.92■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 CDK19Q9BWU1 502 aa16.92■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 ATP7BP35670 1465 aa16.92■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 RGPD3A6NKT7 1758 aaPredicted RBP16.9■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 RGPD4Q7Z3J3 1758 aa16.9■□□□□ 0.3
CACNA1C-IT3-201ENST00000542680 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 PTGER2P43116 358 aa16.88■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 FHDC1Q9C0D6 1143 aaPredicted RBP16.86■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 NUDT16Q96DE0 195 aaKnown RBP16.84■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 PDGFDQ9GZP0 370 aaPredicted RBP16.84■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 PANK3Q9H999 370 aa16.84■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 PPIP5K1Q6PFW1 1433 aa16.84■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
CACNA1C-IT3-201ENST00000542680 PER1O15534 1290 aaPredicted RBP16.83■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 MON2Q7Z3U7 1717 aa16.83■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 CPSF1Q10570 1443 aaKnown RBP16.82■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms