RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 PHF8Q9UPP1 1060 aa17.74■□□□□ 0.43
PDE3A-202ENST00000542675 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
PDE3A-202ENST00000542675 NRAPQ86VF7 1730 aa17.72■□□□□ 0.43
PDE3A-202ENST00000542675 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
PDE3A-202ENST00000542675 LMOD2Q6P5Q4 547 aa17.72■□□□□ 0.43
PDE3A-202ENST00000542675 VPS72Q15906 364 aa17.71■□□□□ 0.43
PDE3A-202ENST00000542675 CFAP70Q5T0N1 1121 aa17.71■□□□□ 0.43
PDE3A-202ENST00000542675 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
PDE3A-202ENST00000542675 NRXN1Q9ULB1 1477 aa17.7■□□□□ 0.42
PDE3A-202ENST00000542675 TRPM3Q9HCF6 1732 aaPredicted RBP17.7■□□□□ 0.42
PDE3A-202ENST00000542675 FAM83GA6ND36 823 aa17.69■□□□□ 0.42
PDE3A-202ENST00000542675 PMFBP1Q8TBY8 1022 aa17.69■□□□□ 0.42
PDE3A-202ENST00000542675 C14orf93Q9H972 538 aaKnown RBP17.69■□□□□ 0.42
PDE3A-202ENST00000542675 PRAM1Q96QH2 718 aa17.68■□□□□ 0.42
PDE3A-202ENST00000542675 PSDA5PKW4 1024 aaPredicted RBP17.67■□□□□ 0.42
PDE3A-202ENST00000542675 ONECUT3O60422 494 aaPredicted RBP17.67■□□□□ 0.42
PDE3A-202ENST00000542675 PSME1Q06323 249 aa17.67■□□□□ 0.42
PDE3A-202ENST00000542675 KRT27Q7Z3Y8 459 aa17.67■□□□□ 0.42
PDE3A-202ENST00000542675 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
PDE3A-202ENST00000542675 LRP5O75197 1615 aa17.67■□□□□ 0.42
PDE3A-202ENST00000542675 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
PDE3A-202ENST00000542675 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
PDE3A-202ENST00000542675 SF3B2Q13435 895 aaKnown RBP17.66■□□□□ 0.42
PDE3A-202ENST00000542675 CRYBG1Q9Y4K1 1723 aa17.65■□□□□ 0.42
PDE3A-202ENST00000542675 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
PDE3A-202ENST00000542675 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
PDE3A-202ENST00000542675 A0A0G2JS52 829 aa17.64■□□□□ 0.41
PDE3A-202ENST00000542675 MYT1Q01538 1121 aa17.64■□□□□ 0.41
PDE3A-202ENST00000542675 FAM98CQ17RN3 349 aaKnown RBP17.64■□□□□ 0.41
PDE3A-202ENST00000542675 HIRIP3Q9BW71 556 aaPredicted RBP17.63■□□□□ 0.41
PDE3A-202ENST00000542675 ARHGEF10O15013 1369 aa17.63■□□□□ 0.41
PDE3A-202ENST00000542675 COL14A1Q05707 1796 aaKnown RBP17.63■□□□□ 0.41
PDE3A-202ENST00000542675 RGPD1P0DJD0 1748 aa17.62■□□□□ 0.41
PDE3A-202ENST00000542675 BTG4Q9NY30 223 aa17.62■□□□□ 0.41
PDE3A-202ENST00000542675 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
PDE3A-202ENST00000542675 POGKQ9P215 609 aa17.61■□□□□ 0.41
PDE3A-202ENST00000542675 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
PDE3A-202ENST00000542675 DLC1Q96QB1 1528 aa17.61■□□□□ 0.41
PDE3A-202ENST00000542675 TNS1Q9HBL0 1735 aaKnown RBP17.61■□□□□ 0.41
PDE3A-202ENST00000542675 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
PDE3A-202ENST00000542675 ANKARQ7Z5J8 1434 aa17.59■□□□□ 0.41
PDE3A-202ENST00000542675 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
PDE3A-202ENST00000542675 EN1Q05925 392 aaPredicted RBP17.59■□□□□ 0.41
PDE3A-202ENST00000542675 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
PDE3A-202ENST00000542675 HRCP23327 699 aa17.58■□□□□ 0.4
PDE3A-202ENST00000542675 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.4
PDE3A-202ENST00000542675 BAG6P46379 1132 aa17.57■□□□□ 0.4
PDE3A-202ENST00000542675 SPATA31A5Q5VU36 1347 aa17.55■□□□□ 0.4
PDE3A-202ENST00000542675 SPATA31A7Q8IWB4 1347 aa17.55■□□□□ 0.4
PDE3A-202ENST00000542675 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
PDE3A-202ENST00000542675 TULP4Q9NRJ4 1543 aa17.55■□□□□ 0.4
PDE3A-202ENST00000542675 PHRF1Q9P1Y6 1649 aaKnown RBP17.54■□□□□ 0.4
PDE3A-202ENST00000542675 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
PDE3A-202ENST00000542675 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
PDE3A-202ENST00000542675 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
PDE3A-202ENST00000542675 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
PDE3A-202ENST00000542675 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
PDE3A-202ENST00000542675 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.4
PDE3A-202ENST00000542675 ITSN1Q15811 1721 aa17.52■□□□□ 0.39
PDE3A-202ENST00000542675 WASLO00401 505 aaPredicted RBP17.51■□□□□ 0.39
PDE3A-202ENST00000542675 CHRNA2Q15822 529 aa17.51■□□□□ 0.39
PDE3A-202ENST00000542675 EZH2Q15910 746 aaKnown RBP17.51■□□□□ 0.39
PDE3A-202ENST00000542675 PIP4P2Q8N4L2 257 aa17.51■□□□□ 0.39
PDE3A-202ENST00000542675 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
PDE3A-202ENST00000542675 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
PDE3A-202ENST00000542675 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
PDE3A-202ENST00000542675 NUTM2GQ5VZR2 741 aa17.49■□□□□ 0.39
PDE3A-202ENST00000542675 SPDYE1Q8NFV5 336 aaPredicted RBP17.49■□□□□ 0.39
PDE3A-202ENST00000542675 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
PDE3A-202ENST00000542675 STRN4Q9NRL3 753 aa17.48■□□□□ 0.39
PDE3A-202ENST00000542675 SPATA31A1Q5TZJ5 1347 aa17.47■□□□□ 0.39
PDE3A-202ENST00000542675 TRIM37O94972 964 aa17.47■□□□□ 0.39
PDE3A-202ENST00000542675 DCAF11Q8TEB1 546 aa17.47■□□□□ 0.39
PDE3A-202ENST00000542675 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
PDE3A-202ENST00000542675 ATP7BP35670 1465 aa17.47■□□□□ 0.39
PDE3A-202ENST00000542675 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
PDE3A-202ENST00000542675 RREB1Q92766 1687 aa17.46■□□□□ 0.39
PDE3A-202ENST00000542675 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.39
PDE3A-202ENST00000542675 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
PDE3A-202ENST00000542675 NUP188Q5SRE5 1749 aa17.46■□□□□ 0.39
PDE3A-202ENST00000542675 TOPAZ1Q8N9V7 1692 aa17.45■□□□□ 0.38
PDE3A-202ENST00000542675 EIF3AQ14152 1382 aaKnown RBP17.45■□□□□ 0.38
PDE3A-202ENST00000542675 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDE3A-202ENST00000542675 NUDT16Q96DE0 195 aaKnown RBP17.45■□□□□ 0.38
PDE3A-202ENST00000542675 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
PDE3A-202ENST00000542675 NRKQ7Z2Y5 1582 aa17.42■□□□□ 0.38
PDE3A-202ENST00000542675 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
PDE3A-202ENST00000542675 APBA3O96018 575 aa17.41■□□□□ 0.38
PDE3A-202ENST00000542675 LMO7Q8WWI1 1683 aa17.41■□□□□ 0.38
PDE3A-202ENST00000542675 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
PDE3A-202ENST00000542675 CDK19Q9BWU1 502 aa17.4■□□□□ 0.38
PDE3A-202ENST00000542675 SSH2Q76I76 1423 aa17.39■□□□□ 0.38
PDE3A-202ENST00000542675 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
PDE3A-202ENST00000542675 SBF2Q86WG5 1849 aa17.39■□□□□ 0.37
PDE3A-202ENST00000542675 ACEP12821 1306 aa17.39■□□□□ 0.37
PDE3A-202ENST00000542675 EVA1CP58658 441 aa17.37■□□□□ 0.37
PDE3A-202ENST00000542675 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
PDE3A-202ENST00000542675 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
PDE3A-202ENST00000542675 PARP4Q9UKK3 1724 aaKnown RBP17.35■□□□□ 0.37
PDE3A-202ENST00000542675 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms