RNA–Protein interactions for RNA: ENST00000542443.5

TRDN-204, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-204ENST00000542443 ZNF775Q96BV0 537 aaPredicted RBP10.67□□□□□ -0.7
TRDN-204ENST00000542443 PRPF38BQ5VTL8 546 aaKnown RBP10.66□□□□□ -0.7
TRDN-204ENST00000542443 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
TRDN-204ENST00000542443 SMCPP49901 116 aaPredicted RBP10.65□□□□□ -0.7
TRDN-204ENST00000542443 QPCTQ16769 361 aa10.65□□□□□ -0.7
TRDN-204ENST00000542443 GMPR2Q9P2T1 348 aaKnown RBP10.64□□□□□ -0.71
TRDN-204ENST00000542443 TMEM132AQ24JP5 1023 aa10.63□□□□□ -0.71
TRDN-204ENST00000542443 POLR3EQ9NVU0 708 aa10.63□□□□□ -0.71
TRDN-204ENST00000542443 MAP10Q9P2G4 905 aa10.63□□□□□ -0.71
TRDN-204ENST00000542443 SIAH2O43255 324 aa10.62□□□□□ -0.71
TRDN-204ENST00000542443 ZNF511Q8NB15 262 aa10.62□□□□□ -0.71
TRDN-204ENST00000542443 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
TRDN-204ENST00000542443 WASF2Q9Y6W5 498 aa10.62□□□□□ -0.71
TRDN-204ENST00000542443 C11orf95C9JLR9 678 aaPredicted RBP10.61□□□□□ -0.71
TRDN-204ENST00000542443 RSPH6AQ9H0K4 717 aa10.61□□□□□ -0.71
TRDN-204ENST00000542443 PER1O15534 1290 aaPredicted RBP10.6□□□□□ -0.71
TRDN-204ENST00000542443 CLK2P49760 499 aaKnown RBP10.6□□□□□ -0.71
TRDN-204ENST00000542443 KDM4CQ9H3R0 1056 aa10.6□□□□□ -0.71
TRDN-204ENST00000542443 LILRB3O75022 631 aa10.59□□□□□ -0.71
TRDN-204ENST00000542443 RTL5Q5HYW3 569 aaPredicted RBP10.59□□□□□ -0.71
TRDN-204ENST00000542443 ATP13A2Q9NQ11 1180 aa10.59□□□□□ -0.71
TRDN-204ENST00000542443 TUSC1Q2TAM9 212 aa10.58□□□□□ -0.72
TRDN-204ENST00000542443 TLL2Q9Y6L7 1015 aa10.58□□□□□ -0.72
TRDN-204ENST00000542443 F12P00748 615 aaPredicted RBP10.57□□□□□ -0.72
TRDN-204ENST00000542443 ATP1B4Q9UN42 357 aaPredicted RBP10.57□□□□□ -0.72
TRDN-204ENST00000542443 VARSP26640 1264 aaKnown RBP10.56□□□□□ -0.72
TRDN-204ENST00000542443 HELBQ8NG08 1087 aaPredicted RBP10.56□□□□□ -0.72
TRDN-204ENST00000542443 FOXJ1Q92949 421 aa10.55□□□□□ -0.72
TRDN-204ENST00000542443 AGERQ15109 404 aa10.54□□□□□ -0.72
TRDN-204ENST00000542443 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
TRDN-204ENST00000542443 FAM117AQ9C073 453 aa10.53□□□□□ -0.72
TRDN-204ENST00000542443 CAPN5O15484 640 aaPredicted RBP10.52□□□□□ -0.73
TRDN-204ENST00000542443 SNRPBP14678 240 aaKnown RBP10.52□□□□□ -0.73
TRDN-204ENST00000542443 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
TRDN-204ENST00000542443 FAM174AQ8TBP5 190 aa10.52□□□□□ -0.73
TRDN-204ENST00000542443 DDRGK1Q96HY6 314 aa10.51□□□□□ -0.73
TRDN-204ENST00000542443 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
TRDN-204ENST00000542443 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
TRDN-204ENST00000542443 BMP1P13497 986 aa10.49□□□□□ -0.73
TRDN-204ENST00000542443 CTDSPL2Q05D32 466 aa10.49□□□□□ -0.73
TRDN-204ENST00000542443 NNTQ13423 1086 aa10.49□□□□□ -0.73
TRDN-204ENST00000542443 PROCA1Q8NCQ7 364 aaPredicted RBP10.49□□□□□ -0.73
TRDN-204ENST00000542443 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
TRDN-204ENST00000542443 BPHLQ86WA6 291 aaPredicted RBP10.48□□□□□ -0.73
TRDN-204ENST00000542443 MPNDQ8N594 471 aa10.48□□□□□ -0.73
TRDN-204ENST00000542443 ARMC2Q8NEN0 867 aa10.48□□□□□ -0.73
TRDN-204ENST00000542443 IL27Q8NEV9 243 aa10.48□□□□□ -0.73
TRDN-204ENST00000542443 C4orf48Q5BLP8 95 aa10.47□□□□□ -0.73
TRDN-204ENST00000542443 SH3D19Q5HYK7 790 aa10.47□□□□□ -0.73
TRDN-204ENST00000542443 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
TRDN-204ENST00000542443 ADH1CP00326 375 aa10.46□□□□□ -0.73
TRDN-204ENST00000542443 KIFC2Q96AC6 838 aa10.46□□□□□ -0.73
TRDN-204ENST00000542443 NBPF14Q5TI25 921 aa10.45□□□□□ -0.74
TRDN-204ENST00000542443 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
TRDN-204ENST00000542443 TRIM46Q7Z4K8 759 aa10.45□□□□□ -0.74
TRDN-204ENST00000542443 MAGEB6P1A0A0J9YX57 407 aa10.44□□□□□ -0.74
TRDN-204ENST00000542443 WDR4P57081 412 aaKnown RBP10.44□□□□□ -0.74
TRDN-204ENST00000542443 LRRN4Q8WUT4 740 aa10.44□□□□□ -0.74
TRDN-204ENST00000542443 CDK15Q96Q40 435 aa10.44□□□□□ -0.74
TRDN-204ENST00000542443 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
TRDN-204ENST00000542443 AP1G2O75843 785 aa10.41□□□□□ -0.74
TRDN-204ENST00000542443 WFS1O76024 890 aa10.41□□□□□ -0.74
TRDN-204ENST00000542443 TIMP2P16035 220 aa10.41□□□□□ -0.74
TRDN-204ENST00000542443 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRDN-204ENST00000542443 GTF3C3Q9Y5Q9 886 aa10.41□□□□□ -0.74
TRDN-204ENST00000542443 NR3C2P08235 984 aa10.4□□□□□ -0.74
TRDN-204ENST00000542443 SH3BP5LQ7L8J4 393 aa10.4□□□□□ -0.74
TRDN-204ENST00000542443 GRM5P41594 1212 aa10.39□□□□□ -0.75
TRDN-204ENST00000542443 NR5A1Q13285 461 aa10.39□□□□□ -0.75
TRDN-204ENST00000542443 PPP2R2DQ66LE6 453 aa10.39□□□□□ -0.75
TRDN-204ENST00000542443 SH3RF1Q7Z6J0 888 aa10.39□□□□□ -0.75
TRDN-204ENST00000542443 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
TRDN-204ENST00000542443 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
TRDN-204ENST00000542443 NFX1Q12986 1120 aaKnown RBP10.38□□□□□ -0.75
TRDN-204ENST00000542443 NR6A1Q15406 480 aa10.38□□□□□ -0.75
TRDN-204ENST00000542443 LCE2AQ5TA79 106 aaPredicted RBP10.38□□□□□ -0.75
TRDN-204ENST00000542443 MRPL14Q6P1L8 145 aaKnown RBP10.38□□□□□ -0.75
TRDN-204ENST00000542443 VASH1Q7L8A9 365 aaPredicted RBP10.38□□□□□ -0.75
TRDN-204ENST00000542443 C1QTNF2Q9BXJ5 285 aa10.38□□□□□ -0.75
TRDN-204ENST00000542443 KLF16Q9BXK1 252 aaPredicted RBP10.38□□□□□ -0.75
TRDN-204ENST00000542443 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
TRDN-204ENST00000542443 TERTO14746 1132 aaKnown RBP10.37□□□□□ -0.75
TRDN-204ENST00000542443 FSHRP23945 695 aa10.37□□□□□ -0.75
TRDN-204ENST00000542443 SCARF1Q14162 830 aa10.37□□□□□ -0.75
TRDN-204ENST00000542443 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
TRDN-204ENST00000542443 ITPKCQ96DU7 683 aa10.37□□□□□ -0.75
TRDN-204ENST00000542443 FKBPLQ9UIM3 349 aa10.37□□□□□ -0.75
TRDN-204ENST00000542443 PURBQ96QR8 312 aaKnown RBP10.36□□□□□ -0.75
TRDN-204ENST00000542443 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
TRDN-204ENST00000542443 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
TRDN-204ENST00000542443 PDXDC2PQ6P474 469 aa10.34□□□□□ -0.75
TRDN-204ENST00000542443 TRMT44Q8IYL2 757 aaKnown RBP10.34□□□□□ -0.75
TRDN-204ENST00000542443 GOPCQ9HD26 462 aa10.34□□□□□ -0.75
TRDN-204ENST00000542443 PCMTD1Q96MG8 357 aaPredicted RBP10.33□□□□□ -0.76
TRDN-204ENST00000542443 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
TRDN-204ENST00000542443 USP17L8P0C7I0 530 aa10.32□□□□□ -0.76
TRDN-204ENST00000542443 RFC5P40937 340 aa10.32□□□□□ -0.76
TRDN-204ENST00000542443 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
TRDN-204ENST00000542443 ZBTB33Q86T24 672 aa10.32□□□□□ -0.76
TRDN-204ENST00000542443 EPS8L1Q8TE68 723 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms