RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 NCBP3Q53F19 620 aaKnown RBP19.85■□□□□ 0.77
DDX11-219ENST00000542242 CDK19Q9BWU1 502 aa19.85■□□□□ 0.77
DDX11-219ENST00000542242 PHF8Q9UPP1 1060 aa19.85■□□□□ 0.77
DDX11-219ENST00000542242 FOXO3O43524 673 aa19.84■□□□□ 0.77
DDX11-219ENST00000542242 ABCA3Q99758 1704 aa19.83■□□□□ 0.77
DDX11-219ENST00000542242 CRYBG1Q9Y4K1 1723 aa19.83■□□□□ 0.77
DDX11-219ENST00000542242 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
DDX11-219ENST00000542242 CC2D1BQ5T0F9 858 aaKnown RBP19.82■□□□□ 0.76
DDX11-219ENST00000542242 TMC1Q8TDI8 760 aa19.82■□□□□ 0.76
DDX11-219ENST00000542242 LRRC59Q96AG4 307 aaKnown RBP19.82■□□□□ 0.76
DDX11-219ENST00000542242 AKAP12Q02952 1782 aa19.82■□□□□ 0.76
DDX11-219ENST00000542242 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
DDX11-219ENST00000542242 POLR3AO14802 1390 aaPredicted RBP19.82■□□□□ 0.76
DDX11-219ENST00000542242 CABP2Q9NPB3 220 aa19.81■□□□□ 0.76
DDX11-219ENST00000542242 SPATA31A6Q5VVP1 1343 aa19.8■□□□□ 0.76
DDX11-219ENST00000542242 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
DDX11-219ENST00000542242 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
DDX11-219ENST00000542242 ATAD2Q6PL18 1390 aa19.8■□□□□ 0.76
DDX11-219ENST00000542242 NPC1L1Q9UHC9 1359 aa19.8■□□□□ 0.76
DDX11-219ENST00000542242 PLEKHG3A1L390 1219 aa19.79■□□□□ 0.76
DDX11-219ENST00000542242 AMER1Q5JTC6 1135 aaPredicted RBP19.79■□□□□ 0.76
DDX11-219ENST00000542242 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
DDX11-219ENST00000542242 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
DDX11-219ENST00000542242 SPATA31A3Q5VYP0 1347 aa19.78■□□□□ 0.76
DDX11-219ENST00000542242 PMFBP1Q8TBY8 1022 aa19.78■□□□□ 0.76
DDX11-219ENST00000542242 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
DDX11-219ENST00000542242 NINLQ9Y2I6 1382 aa19.78■□□□□ 0.76
DDX11-219ENST00000542242 XPCQ01831 940 aaPredicted RBP19.77■□□□□ 0.76
DDX11-219ENST00000542242 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
DDX11-219ENST00000542242 KRT28Q7Z3Y7 464 aa19.76■□□□□ 0.75
DDX11-219ENST00000542242 NLRP13Q86W25 1043 aa19.76■□□□□ 0.75
DDX11-219ENST00000542242 FAM9BQ8IZU0 186 aa19.76■□□□□ 0.75
DDX11-219ENST00000542242 CARD14Q9BXL6 1004 aa19.76■□□□□ 0.75
DDX11-219ENST00000542242 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
DDX11-219ENST00000542242 MON2Q7Z3U7 1717 aa19.75■□□□□ 0.75
DDX11-219ENST00000542242 PPIP5K1Q6PFW1 1433 aa19.75■□□□□ 0.75
DDX11-219ENST00000542242 NSD3Q9BZ95 1437 aa19.75■□□□□ 0.75
DDX11-219ENST00000542242 NRKQ7Z2Y5 1582 aa19.74■□□□□ 0.75
DDX11-219ENST00000542242 ZNF772Q68DY9 489 aaPredicted RBP19.74■□□□□ 0.75
DDX11-219ENST00000542242 SSH2Q76I76 1423 aa19.73■□□□□ 0.75
DDX11-219ENST00000542242 ACEP12821 1306 aa19.73■□□□□ 0.75
DDX11-219ENST00000542242 CD163L1Q9NR16 1453 aa19.72■□□□□ 0.75
DDX11-219ENST00000542242 MEX3CQ5U5Q3 659 aaKnown RBP19.71■□□□□ 0.75
DDX11-219ENST00000542242 CPSF1Q10570 1443 aaKnown RBP19.7■□□□□ 0.74
DDX11-219ENST00000542242 HNRNPUQ00839 825 aaKnown RBP eCLIP19.7■□□□□ 0.74
DDX11-219ENST00000542242 UPF1Q92900 1129 aaKnown RBP eCLIP19.7■□□□□ 0.74
DDX11-219ENST00000542242 PHRF1Q9P1Y6 1649 aaKnown RBP19.69■□□□□ 0.74
DDX11-219ENST00000542242 PSME1Q06323 249 aa19.69■□□□□ 0.74
DDX11-219ENST00000542242 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
DDX11-219ENST00000542242 TERF2IPQ9NYB0 399 aa19.68■□□□□ 0.74
DDX11-219ENST00000542242 CABP1Q9NZU7 370 aa19.68■□□□□ 0.74
DDX11-219ENST00000542242 PIK3C2AO00443 1686 aa19.68■□□□□ 0.74
DDX11-219ENST00000542242 USP54Q70EL1 1684 aa19.68■□□□□ 0.74
DDX11-219ENST00000542242 USP6P35125 1406 aa19.68■□□□□ 0.74
DDX11-219ENST00000542242 PPP2R1AP30153 589 aa19.67■□□□□ 0.74
DDX11-219ENST00000542242 NGDNQ8NEJ9 315 aaKnown RBP19.67■□□□□ 0.74
DDX11-219ENST00000542242 CGNL1Q0VF96 1302 aa19.67■□□□□ 0.74
DDX11-219ENST00000542242 A0A1W2PP64 1363 aa19.67■□□□□ 0.74
DDX11-219ENST00000542242 ARHGEF10O15013 1369 aa19.67■□□□□ 0.74
DDX11-219ENST00000542242 HDGFL2Q7Z4V5 671 aaPredicted RBP19.66■□□□□ 0.74
DDX11-219ENST00000542242 NSD2O96028 1365 aa19.64■□□□□ 0.73
DDX11-219ENST00000542242 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.64■□□□□ 0.73
DDX11-219ENST00000542242 RXRBP28702 533 aa19.63■□□□□ 0.73
DDX11-219ENST00000542242 KIF20BQ96Q89 1820 aa19.62■□□□□ 0.73
DDX11-219ENST00000542242 ANKRD26Q9UPS8 1709 aa19.62■□□□□ 0.73
DDX11-219ENST00000542242 NUTM2BA6NNL0 878 aaPredicted RBP19.62■□□□□ 0.73
DDX11-219ENST00000542242 NUTM2EB1AL46 878 aaPredicted RBP19.62■□□□□ 0.73
DDX11-219ENST00000542242 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
DDX11-219ENST00000542242 NUTM2AQ8IVF1 878 aaPredicted RBP19.62■□□□□ 0.73
DDX11-219ENST00000542242 NWD2Q9ULI1 1742 aa19.62■□□□□ 0.73
DDX11-219ENST00000542242 PLCH1Q4KWH8 1693 aa19.62■□□□□ 0.73
DDX11-219ENST00000542242 NRAPQ86VF7 1730 aa19.6■□□□□ 0.73
DDX11-219ENST00000542242 SLIT2O94813 1529 aa19.6■□□□□ 0.73
DDX11-219ENST00000542242 CABLES1Q8TDN4 633 aa19.59■□□□□ 0.73
DDX11-219ENST00000542242 SLIT3O75094 1523 aa19.59■□□□□ 0.73
DDX11-219ENST00000542242 USP19O94966 1318 aa19.58■□□□□ 0.73
DDX11-219ENST00000542242 FNBP4Q8N3X1 1017 aaPredicted RBP19.58■□□□□ 0.72
DDX11-219ENST00000542242 ZNF692Q9BU19 519 aaPredicted RBP19.58■□□□□ 0.72
DDX11-219ENST00000542242 BCL9LQ86UU0 1499 aa19.57■□□□□ 0.72
DDX11-219ENST00000542242 COL14A1Q05707 1796 aaKnown RBP19.57■□□□□ 0.72
DDX11-219ENST00000542242 AFF2P51816 1311 aa19.56■□□□□ 0.72
DDX11-219ENST00000542242 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
DDX11-219ENST00000542242 ADAMTS2O95450 1211 aa19.56■□□□□ 0.72
DDX11-219ENST00000542242 INSRP06213 1382 aa19.56■□□□□ 0.72
DDX11-219ENST00000542242 TTC21BQ7Z4L5 1316 aa19.55■□□□□ 0.72
DDX11-219ENST00000542242 LMO7Q8WWI1 1683 aa19.55■□□□□ 0.72
DDX11-219ENST00000542242 COL18A1P39060 1754 aa19.55■□□□□ 0.72
DDX11-219ENST00000542242 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
DDX11-219ENST00000542242 PAK3O75914 559 aaPredicted RBP19.53■□□□□ 0.72
DDX11-219ENST00000542242 ATRNO75882 1429 aa19.52■□□□□ 0.72
DDX11-219ENST00000542242 TNNT2P45379 298 aaPredicted RBP19.52■□□□□ 0.72
DDX11-219ENST00000542242 WDR43Q15061 677 aaKnown RBP eCLIP19.52■□□□□ 0.72
DDX11-219ENST00000542242 C8orf37Q96NL8 207 aa19.52■□□□□ 0.72
DDX11-219ENST00000542242 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
DDX11-219ENST00000542242 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
DDX11-219ENST00000542242 NFAT5O94916 1531 aa19.51■□□□□ 0.71
DDX11-219ENST00000542242 FYB1O15117 783 aa19.51■□□□□ 0.71
DDX11-219ENST00000542242 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
DDX11-219ENST00000542242 GTF3C3Q9Y5Q9 886 aa19.51■□□□□ 0.71
DDX11-219ENST00000542242 USP31Q70CQ4 1352 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms