RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 EZH2Q15910 746 aaKnown RBP11.76□□□□□ -0.53
NPIPB4-215ENST00000542133 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
NPIPB4-215ENST00000542133 TECPR2O15040 1411 aa11.76□□□□□ -0.53
NPIPB4-215ENST00000542133 KNDC1Q76NI1 1749 aa11.75□□□□□ -0.53
NPIPB4-215ENST00000542133 FAM182BQ5T319 152 aa11.75□□□□□ -0.53
NPIPB4-215ENST00000542133 CABLES1Q8TDN4 633 aa11.75□□□□□ -0.53
NPIPB4-215ENST00000542133 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
NPIPB4-215ENST00000542133 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
NPIPB4-215ENST00000542133 PARD3Q8TEW0 1356 aa11.74□□□□□ -0.53
NPIPB4-215ENST00000542133 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
NPIPB4-215ENST00000542133 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
NPIPB4-215ENST00000542133 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
NPIPB4-215ENST00000542133 KRT28Q7Z3Y7 464 aa11.73□□□□□ -0.53
NPIPB4-215ENST00000542133 CAMKK2Q96RR4 588 aa11.73□□□□□ -0.53
NPIPB4-215ENST00000542133 SBNO1A3KN83 1393 aa11.72□□□□□ -0.53
NPIPB4-215ENST00000542133 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-215ENST00000542133 NRXN1Q9ULB1 1477 aa11.71□□□□□ -0.53
NPIPB4-215ENST00000542133 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
NPIPB4-215ENST00000542133 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.53
NPIPB4-215ENST00000542133 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NPIPB4-215ENST00000542133 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
NPIPB4-215ENST00000542133 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
NPIPB4-215ENST00000542133 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
NPIPB4-215ENST00000542133 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
NPIPB4-215ENST00000542133 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
NPIPB4-215ENST00000542133 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
NPIPB4-215ENST00000542133 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
NPIPB4-215ENST00000542133 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 PPP1R1BQ9UD71 204 aaPredicted RBP11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 CRYBG1Q9Y4K1 1723 aa11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 UTRNP46939 3433 aa11.69□□□□□ -0.54
NPIPB4-215ENST00000542133 TRIM37O94972 964 aa11.68□□□□□ -0.54
NPIPB4-215ENST00000542133 PSME1Q06323 249 aa11.68□□□□□ -0.54
NPIPB4-215ENST00000542133 ZNF784Q8NCA9 323 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-215ENST00000542133 ALS2Q96Q42 1657 aa11.68□□□□□ -0.54
NPIPB4-215ENST00000542133 TULP1O00294 542 aaPredicted RBP11.67□□□□□ -0.54
NPIPB4-215ENST00000542133 SPON1Q9HCB6 807 aa11.67□□□□□ -0.54
NPIPB4-215ENST00000542133 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
NPIPB4-215ENST00000542133 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
NPIPB4-215ENST00000542133 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
NPIPB4-215ENST00000542133 APBA3O96018 575 aa11.66□□□□□ -0.54
NPIPB4-215ENST00000542133 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
NPIPB4-215ENST00000542133 STK26Q9P289 416 aa11.66□□□□□ -0.54
NPIPB4-215ENST00000542133 CASZ1Q86V15 1759 aa11.66□□□□□ -0.54
NPIPB4-215ENST00000542133 KCNQ2O43526 872 aa11.65□□□□□ -0.54
NPIPB4-215ENST00000542133 FAM196AQ6ZSG2 479 aa11.65□□□□□ -0.54
NPIPB4-215ENST00000542133 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
NPIPB4-215ENST00000542133 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
NPIPB4-215ENST00000542133 MYOM1P52179 1685 aa11.64□□□□□ -0.55
NPIPB4-215ENST00000542133 ADGRF5Q8IZF2 1346 aa11.63□□□□□ -0.55
NPIPB4-215ENST00000542133 YTHDC2Q9H6S0 1430 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-215ENST00000542133 C1QTNF8P60827 252 aa11.63□□□□□ -0.55
NPIPB4-215ENST00000542133 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
NPIPB4-215ENST00000542133 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
NPIPB4-215ENST00000542133 SPATA31A1Q5TZJ5 1347 aa11.62□□□□□ -0.55
NPIPB4-215ENST00000542133 PIK3C2GO75747 1445 aa11.61□□□□□ -0.55
NPIPB4-215ENST00000542133 ANKARQ7Z5J8 1434 aa11.61□□□□□ -0.55
NPIPB4-215ENST00000542133 PHRF1Q9P1Y6 1649 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-215ENST00000542133 ITGAEP38570 1179 aa11.6□□□□□ -0.55
NPIPB4-215ENST00000542133 TMEM132EQ6IEE7 984 aa11.6□□□□□ -0.55
NPIPB4-215ENST00000542133 CHD4Q14839 1912 aa11.6□□□□□ -0.55
NPIPB4-215ENST00000542133 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
NPIPB4-215ENST00000542133 CEP350Q5VT06 3117 aa11.59□□□□□ -0.55
NPIPB4-215ENST00000542133 PMFBP1Q8TBY8 1022 aa11.58□□□□□ -0.56
NPIPB4-215ENST00000542133 PRDM11Q9NQV5 511 aa11.58□□□□□ -0.56
NPIPB4-215ENST00000542133 SIRT1Q96EB6 747 aa11.57□□□□□ -0.56
NPIPB4-215ENST00000542133 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
NPIPB4-215ENST00000542133 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
NPIPB4-215ENST00000542133 PARP4Q9UKK3 1724 aaKnown RBP11.57□□□□□ -0.56
NPIPB4-215ENST00000542133 KIAA0232Q92628 1395 aa11.56□□□□□ -0.56
NPIPB4-215ENST00000542133 ANKRD30BQ9BXX2 1392 aa11.56□□□□□ -0.56
NPIPB4-215ENST00000542133 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
NPIPB4-215ENST00000542133 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
NPIPB4-215ENST00000542133 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
NPIPB4-215ENST00000542133 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
NPIPB4-215ENST00000542133 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
NPIPB4-215ENST00000542133 BARGINQ6ZT62 677 aa11.55□□□□□ -0.56
NPIPB4-215ENST00000542133 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
NPIPB4-215ENST00000542133 PTGER2P43116 358 aa11.54□□□□□ -0.56
NPIPB4-215ENST00000542133 DLC1Q96QB1 1528 aa11.54□□□□□ -0.56
NPIPB4-215ENST00000542133 TULP4Q9NRJ4 1543 aa11.54□□□□□ -0.56
NPIPB4-215ENST00000542133 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
NPIPB4-215ENST00000542133 CHRNA2Q15822 529 aa11.53□□□□□ -0.56
NPIPB4-215ENST00000542133 PDGFDQ9GZP0 370 aaPredicted RBP11.53□□□□□ -0.56
NPIPB4-215ENST00000542133 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
NPIPB4-215ENST00000542133 SBF2Q86WG5 1849 aa11.53□□□□□ -0.56
NPIPB4-215ENST00000542133 ZBTB7AO95365 584 aa11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 SAFB2Q14151 953 aaKnown RBP eCLIP11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 PRAM1Q96QH2 718 aa11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 PRR36Q9H6K5 1346 aa11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 LRRC37A3O60309 1634 aa11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 OVOS2A0A0G2JMS6 1433 aa11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
NPIPB4-215ENST00000542133 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms