RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
VTN-203ENST00000542029 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
VTN-203ENST00000542029 ARHGEF28Q8N1W1 1705 aaKnown RBP16.31■□□□□ 0.2
VTN-203ENST00000542029 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
VTN-203ENST00000542029 MARF1Q9Y4F3 1742 aaKnown RBP16.3■□□□□ 0.2
VTN-203ENST00000542029 ROCK2O75116 1388 aaKnown RBP16.29■□□□□ 0.2
VTN-203ENST00000542029 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
VTN-203ENST00000542029 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
VTN-203ENST00000542029 ABTB2Q8N961 1025 aa16.29■□□□□ 0.2
VTN-203ENST00000542029 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
VTN-203ENST00000542029 A0A0G2JS52 829 aa16.28■□□□□ 0.2
VTN-203ENST00000542029 MYT1Q01538 1121 aa16.28■□□□□ 0.2
VTN-203ENST00000542029 SF3B2Q13435 895 aaKnown RBP16.28■□□□□ 0.2
VTN-203ENST00000542029 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
VTN-203ENST00000542029 TRPM3Q9HCF6 1732 aaPredicted RBP16.28■□□□□ 0.2
VTN-203ENST00000542029 GLI3P10071 1580 aa16.27■□□□□ 0.2
VTN-203ENST00000542029 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.19
VTN-203ENST00000542029 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
VTN-203ENST00000542029 KIAA0232Q92628 1395 aa16.26■□□□□ 0.19
VTN-203ENST00000542029 SPATA31A5Q5VU36 1347 aa16.26■□□□□ 0.19
VTN-203ENST00000542029 SPATA31A7Q8IWB4 1347 aa16.26■□□□□ 0.19
VTN-203ENST00000542029 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
VTN-203ENST00000542029 NUTM2GQ5VZR2 741 aa16.26■□□□□ 0.19
VTN-203ENST00000542029 CABP1Q9NZU7 370 aa16.26■□□□□ 0.19
VTN-203ENST00000542029 ZRANB1Q9UGI0 708 aa16.26■□□□□ 0.19
VTN-203ENST00000542029 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
VTN-203ENST00000542029 ALS2Q96Q42 1657 aa16.25■□□□□ 0.19
VTN-203ENST00000542029 ZC3H6P61129 1189 aaKnown RBP16.25■□□□□ 0.19
VTN-203ENST00000542029 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
VTN-203ENST00000542029 ITSN1Q15811 1721 aa16.24■□□□□ 0.19
VTN-203ENST00000542029 USP19O94966 1318 aa16.23■□□□□ 0.19
VTN-203ENST00000542029 GCP02774 474 aa16.23■□□□□ 0.19
VTN-203ENST00000542029 EVA1CP58658 441 aa16.23■□□□□ 0.19
VTN-203ENST00000542029 CHRNA2Q15822 529 aa16.23■□□□□ 0.19
VTN-203ENST00000542029 CPDO75976 1380 aa16.23■□□□□ 0.19
VTN-203ENST00000542029 COL14A1Q05707 1796 aaKnown RBP16.22■□□□□ 0.19
VTN-203ENST00000542029 SPATA31A1Q5TZJ5 1347 aa16.21■□□□□ 0.19
VTN-203ENST00000542029 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.19
VTN-203ENST00000542029 STRN4Q9NRL3 753 aa16.21■□□□□ 0.19
VTN-203ENST00000542029 ABCA3Q99758 1704 aa16.21■□□□□ 0.19
VTN-203ENST00000542029 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
VTN-203ENST00000542029 NLRP6P59044 892 aa16.2■□□□□ 0.18
VTN-203ENST00000542029 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
VTN-203ENST00000542029 USP6P35125 1406 aa16.19■□□□□ 0.18
VTN-203ENST00000542029 PLCH1Q4KWH8 1693 aa16.19■□□□□ 0.18
VTN-203ENST00000542029 SBNO2Q9Y2G9 1366 aa16.18■□□□□ 0.18
VTN-203ENST00000542029 BAG6P46379 1132 aa16.18■□□□□ 0.18
VTN-203ENST00000542029 BARGINQ6ZT62 677 aa16.18■□□□□ 0.18
VTN-203ENST00000542029 EP400Q96L91 3159 aa16.18■□□□□ 0.18
VTN-203ENST00000542029 TOPAZ1Q8N9V7 1692 aa16.18■□□□□ 0.18
VTN-203ENST00000542029 TCP11L2Q8N4U5 519 aa16.17■□□□□ 0.18
VTN-203ENST00000542029 THRAP3Q9Y2W1 955 aaKnown RBP16.17■□□□□ 0.18
VTN-203ENST00000542029 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
VTN-203ENST00000542029 DEFB132Q7Z7B7 95 aa16.16■□□□□ 0.18
VTN-203ENST00000542029 SSH2Q76I76 1423 aa16.16■□□□□ 0.18
VTN-203ENST00000542029 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
VTN-203ENST00000542029 FAM196AQ6ZSG2 479 aa16.15■□□□□ 0.18
VTN-203ENST00000542029 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
VTN-203ENST00000542029 USP35Q9P2H5 1018 aa16.15■□□□□ 0.18
VTN-203ENST00000542029 TRPM1Q7Z4N2 1603 aa16.15■□□□□ 0.18
VTN-203ENST00000542029 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
VTN-203ENST00000542029 NRAPQ86VF7 1730 aa16.14■□□□□ 0.17
VTN-203ENST00000542029 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
VTN-203ENST00000542029 LARP1Q6PKG0 1096 aaKnown RBP16.14■□□□□ 0.17
VTN-203ENST00000542029 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
VTN-203ENST00000542029 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
VTN-203ENST00000542029 C11orf95C9JLR9 678 aaPredicted RBP16.13■□□□□ 0.17
VTN-203ENST00000542029 QRICH2Q9H0J4 1663 aa16.12■□□□□ 0.17
VTN-203ENST00000542029 CRYBG1Q9Y4K1 1723 aa16.12■□□□□ 0.17
VTN-203ENST00000542029 CPSF1Q10570 1443 aaKnown RBP16.11■□□□□ 0.17
VTN-203ENST00000542029 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
VTN-203ENST00000542029 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
VTN-203ENST00000542029 NRKQ7Z2Y5 1582 aa16.1■□□□□ 0.17
VTN-203ENST00000542029 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
VTN-203ENST00000542029 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
VTN-203ENST00000542029 PHRF1Q9P1Y6 1649 aaKnown RBP16.09■□□□□ 0.17
VTN-203ENST00000542029 FAM182BQ5T319 152 aa16.09■□□□□ 0.17
VTN-203ENST00000542029 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
VTN-203ENST00000542029 TERF2IPQ9NYB0 399 aa16.09■□□□□ 0.17
VTN-203ENST00000542029 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
VTN-203ENST00000542029 TMC1Q8TDI8 760 aa16.08■□□□□ 0.16
VTN-203ENST00000542029 CDCA7Q9BWT1 371 aaPredicted RBP16.08■□□□□ 0.16
VTN-203ENST00000542029 DISP2A7MBM2 1401 aa16.08■□□□□ 0.16
VTN-203ENST00000542029 CRB1P82279 1406 aa16.08■□□□□ 0.16
VTN-203ENST00000542029 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
VTN-203ENST00000542029 SLIT3O75094 1523 aa16.08■□□□□ 0.16
VTN-203ENST00000542029 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.16
VTN-203ENST00000542029 EN1Q05925 392 aaPredicted RBP16.07■□□□□ 0.16
VTN-203ENST00000542029 BRWD3Q6RI45 1802 aa16.07■□□□□ 0.16
VTN-203ENST00000542029 WDR17Q8IZU2 1322 aa16.06■□□□□ 0.16
VTN-203ENST00000542029 TRIM37O94972 964 aa16.06■□□□□ 0.16
VTN-203ENST00000542029 SRCAPQ6ZRS2 3230 aa16.06■□□□□ 0.16
VTN-203ENST00000542029 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
VTN-203ENST00000542029 PARD3Q8TEW0 1356 aa16.05■□□□□ 0.16
VTN-203ENST00000542029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
VTN-203ENST00000542029 SLC12A5Q9H2X9 1139 aa16.05■□□□□ 0.16
VTN-203ENST00000542029 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
VTN-203ENST00000542029 SOX12O15370 315 aa16.04■□□□□ 0.16
VTN-203ENST00000542029 CSB-PGBD3P0DP91 1061 aa16.04■□□□□ 0.16
VTN-203ENST00000542029 AXIN2Q9Y2T1 843 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms