RNA–Protein interactions for RNA: ENST00000542011.1

VSIG10-208, Transcript of V-set and immunoglobulin domain containing 10, human

TSL 3

Gene VSIG10, Length 572 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VSIG10-208	ENST00000542011	PAK3	O75914	559 aa	Predicted RBP	13.87	□□□□□ -0.19
VSIG10-208	ENST00000542011	SRPK2	P78362	688 aa	Known RBP	13.87	□□□□□ -0.19
VSIG10-208	ENST00000542011	CABLES1	Q8TDN4	633 aa		13.87	□□□□□ -0.19
VSIG10-208	ENST00000542011	SIN3A	Q96ST3	1273 aa		13.87	□□□□□ -0.19
VSIG10-208	ENST00000542011	ACE	P12821	1306 aa		13.87	□□□□□ -0.19
VSIG10-208	ENST00000542011	EVC2	Q86UK5	1308 aa		13.87	□□□□□ -0.19
VSIG10-208	ENST00000542011	NWD2	Q9ULI1	1742 aa		13.87	□□□□□ -0.19
VSIG10-208	ENST00000542011	ROCK2	O75116	1388 aa	Known RBP	13.86	□□□□□ -0.19
VSIG10-208	ENST00000542011	SLC24A1	O60721	1099 aa		13.86	□□□□□ -0.19
VSIG10-208	ENST00000542011	TRIM26	Q12899	539 aa	Predicted RBP	13.86	□□□□□ -0.19
VSIG10-208	ENST00000542011	RALGAPB	Q86X10	1494 aa		13.86	□□□□□ -0.19
VSIG10-208	ENST00000542011	NEUROD1	Q13562	356 aa		13.85	□□□□□ -0.19
VSIG10-208	ENST00000542011	ZNF692	Q9BU19	519 aa	Predicted RBP	13.85	□□□□□ -0.19
VSIG10-208	ENST00000542011	NLRP13	Q86W25	1043 aa		13.84	□□□□□ -0.19
VSIG10-208	ENST00000542011	NRAP	Q86VF7	1730 aa		13.84	□□□□□ -0.19
VSIG10-208	ENST00000542011	SBNO2	Q9Y2G9	1366 aa		13.83	□□□□□ -0.19
VSIG10-208	ENST00000542011	PRDM11	Q9NQV5	511 aa		13.83	□□□□□ -0.2
VSIG10-208	ENST00000542011	BTG4	Q9NY30	223 aa		13.83	□□□□□ -0.2
VSIG10-208	ENST00000542011	SEPT12	Q8IYM1	358 aa		13.82	□□□□□ -0.2
VSIG10-208	ENST00000542011	PUS7	Q96PZ0	661 aa	Known RBP	13.82	□□□□□ -0.2
VSIG10-208	ENST00000542011	EP400	Q96L91	3159 aa		13.82	□□□□□ -0.2
VSIG10-208	ENST00000542011	USP19	O94966	1318 aa		13.82	□□□□□ -0.2
VSIG10-208	ENST00000542011	CPD	O75976	1380 aa		13.82	□□□□□ -0.2
VSIG10-208	ENST00000542011	QRICH2	Q9H0J4	1663 aa		13.82	□□□□□ -0.2
VSIG10-208	ENST00000542011	PPIP5K1	Q6PFW1	1433 aa		13.81	□□□□□ -0.2
VSIG10-208	ENST00000542011	ABTB2	Q8N961	1025 aa		13.81	□□□□□ -0.2
VSIG10-208	ENST00000542011	CABP2	Q9NPB3	220 aa		13.81	□□□□□ -0.2
VSIG10-208	ENST00000542011	CCDC9	Q9Y3X0	531 aa	Known RBP	13.81	□□□□□ -0.2
VSIG10-208	ENST00000542011	TONSL	Q96HA7	1378 aa		13.81	□□□□□ -0.2
VSIG10-208	ENST00000542011	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.8	□□□□□ -0.2
VSIG10-208	ENST00000542011	CABP1	Q9NZU7	370 aa		13.8	□□□□□ -0.2
VSIG10-208	ENST00000542011	SPATA31A5	Q5VU36	1347 aa		13.8	□□□□□ -0.2
VSIG10-208	ENST00000542011	SPATA31A7	Q8IWB4	1347 aa		13.8	□□□□□ -0.2
VSIG10-208	ENST00000542011	BRWD3	Q6RI45	1802 aa		13.8	□□□□□ -0.2
VSIG10-208	ENST00000542011	GLI3	P10071	1580 aa		13.79	□□□□□ -0.2
VSIG10-208	ENST00000542011	TRPM1	Q7Z4N2	1603 aa		13.79	□□□□□ -0.2
VSIG10-208	ENST00000542011	KRT27	Q7Z3Y8	459 aa		13.79	□□□□□ -0.2
VSIG10-208	ENST00000542011	CARD11	Q9BXL7	1154 aa		13.79	□□□□□ -0.2
VSIG10-208	ENST00000542011	GC	P02774	474 aa		13.78	□□□□□ -0.2
VSIG10-208	ENST00000542011	KIAA0232	Q92628	1395 aa		13.78	□□□□□ -0.2
VSIG10-208	ENST00000542011	BLM	P54132	1417 aa	Predicted RBP	13.78	□□□□□ -0.2
VSIG10-208	ENST00000542011	USP6	P35125	1406 aa		13.77	□□□□□ -0.21
VSIG10-208	ENST00000542011	SF3B2	Q13435	895 aa	Known RBP	13.77	□□□□□ -0.21
VSIG10-208	ENST00000542011	TTC21A	Q8NDW8	1320 aa		13.77	□□□□□ -0.21
VSIG10-208	ENST00000542011	TIMELESS	Q9UNS1	1208 aa		13.77	□□□□□ -0.21
VSIG10-208	ENST00000542011	COL14A1	Q05707	1796 aa	Known RBP	13.76	□□□□□ -0.21
VSIG10-208	ENST00000542011	SSH2	Q76I76	1423 aa		13.76	□□□□□ -0.21
VSIG10-208	ENST00000542011	C11orf95	C9JLR9	678 aa	Predicted RBP	13.76	□□□□□ -0.21
VSIG10-208	ENST00000542011	PLEKHG5	O94827	1062 aa		13.76	□□□□□ -0.21
VSIG10-208	ENST00000542011	BARGIN	Q6ZT62	677 aa		13.76	□□□□□ -0.21
VSIG10-208	ENST00000542011	KCNH5	Q8NCM2	988 aa		13.76	□□□□□ -0.21
VSIG10-208	ENST00000542011	THRAP3	Q9Y2W1	955 aa	Known RBP	13.76	□□□□□ -0.21
VSIG10-208	ENST00000542011	SPATA31A1	Q5TZJ5	1347 aa		13.75	□□□□□ -0.21
VSIG10-208	ENST00000542011	CLSPN	Q9HAW4	1339 aa		13.74	□□□□□ -0.21
VSIG10-208	ENST00000542011	EVA1C	P58658	441 aa		13.74	□□□□□ -0.21
VSIG10-208	ENST00000542011	NLRP6	P59044	892 aa		13.74	□□□□□ -0.21
VSIG10-208	ENST00000542011	ZC3H6	P61129	1189 aa	Known RBP	13.74	□□□□□ -0.21
VSIG10-208	ENST00000542011	FAM98C	Q17RN3	349 aa	Known RBP	13.74	□□□□□ -0.21
VSIG10-208	ENST00000542011	ZRANB1	Q9UGI0	708 aa		13.74	□□□□□ -0.21
VSIG10-208	ENST00000542011	CPSF1	Q10570	1443 aa	Known RBP	13.73	□□□□□ -0.21
VSIG10-208	ENST00000542011	AATK	Q6ZMQ8	1374 aa		13.72	□□□□□ -0.21
VSIG10-208	ENST00000542011	NINL	Q9Y2I6	1382 aa		13.72	□□□□□ -0.21
VSIG10-208	ENST00000542011	TTC21B	Q7Z4L5	1316 aa		13.72	□□□□□ -0.21
VSIG10-208	ENST00000542011		A0A0G2JS52	829 aa		13.72	□□□□□ -0.21
VSIG10-208	ENST00000542011	MYT1	Q01538	1121 aa		13.72	□□□□□ -0.21
VSIG10-208	ENST00000542011	NUTM2G	Q5VZR2	741 aa		13.72	□□□□□ -0.21
VSIG10-208	ENST00000542011	CHRNA2	Q15822	529 aa		13.71	□□□□□ -0.21
VSIG10-208	ENST00000542011	TCP11L2	Q8N4U5	519 aa		13.71	□□□□□ -0.21
VSIG10-208	ENST00000542011	NRK	Q7Z2Y5	1582 aa		13.71	□□□□□ -0.22
VSIG10-208	ENST00000542011	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.7	□□□□□ -0.22
VSIG10-208	ENST00000542011	STRN4	Q9NRL3	753 aa		13.7	□□□□□ -0.22
VSIG10-208	ENST00000542011	AKAP12	Q02952	1782 aa		13.69	□□□□□ -0.22
VSIG10-208	ENST00000542011	BAG6	P46379	1132 aa		13.69	□□□□□ -0.22
VSIG10-208	ENST00000542011	FAM196A	Q6ZSG2	479 aa		13.69	□□□□□ -0.22
VSIG10-208	ENST00000542011	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.69	□□□□□ -0.22
VSIG10-208	ENST00000542011	TERF2IP	Q9NYB0	399 aa		13.69	□□□□□ -0.22
VSIG10-208	ENST00000542011	USP31	Q70CQ4	1352 aa		13.69	□□□□□ -0.22
VSIG10-208	ENST00000542011	KTN1	Q86UP2	1357 aa	Known RBP	13.69	□□□□□ -0.22
VSIG10-208	ENST00000542011	ARHGEF25	Q86VW2	580 aa		13.68	□□□□□ -0.22
VSIG10-208	ENST00000542011	SLIT3	O75094	1523 aa		13.68	□□□□□ -0.22
VSIG10-208	ENST00000542011	THSD7A	Q9UPZ6	1657 aa		13.67	□□□□□ -0.22
VSIG10-208	ENST00000542011	DISP2	A7MBM2	1401 aa		13.66	□□□□□ -0.22
VSIG10-208	ENST00000542011	PDE3B	Q13370	1112 aa		13.66	□□□□□ -0.22
VSIG10-208	ENST00000542011	CDCA8	Q53HL2	280 aa		13.66	□□□□□ -0.22
VSIG10-208	ENST00000542011	LARP1	Q6PKG0	1096 aa	Known RBP	13.66	□□□□□ -0.22
VSIG10-208	ENST00000542011	LMO7	Q8WWI1	1683 aa		13.66	□□□□□ -0.22
VSIG10-208	ENST00000542011	CRB1	P82279	1406 aa		13.65	□□□□□ -0.22
VSIG10-208	ENST00000542011	TESK2	Q96S53	571 aa		13.65	□□□□□ -0.22
VSIG10-208	ENST00000542011	PARD3	Q8TEW0	1356 aa		13.65	□□□□□ -0.22
VSIG10-208	ENST00000542011	COL5A2	P05997	1499 aa	Predicted RBP	13.65	□□□□□ -0.22
VSIG10-208	ENST00000542011	CAMTA1	Q9Y6Y1	1673 aa		13.65	□□□□□ -0.22
VSIG10-208	ENST00000542011	EDC4	Q6P2E9	1401 aa	Known RBP	13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	WNK3	Q9BYP7	1800 aa		13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	PIK3C2A	O00443	1686 aa		13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	ST20-MTHFS	A0A0A6YYL1	179 aa		13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	RGPD1	P0DJD0	1748 aa		13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	MON2	Q7Z3U7	1717 aa		13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	TNS1	Q9HBL0	1735 aa	Known RBP	13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	ABCC6	O95255	1503 aa		13.64	□□□□□ -0.23
VSIG10-208	ENST00000542011	WDR17	Q8IZU2	1322 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms