RNA–Protein interactions for RNA: ENST00000541967.1

ARF3-209, Transcript of ADP ribosylation factor 3, humanhuman

TSL 4

Gene ARF3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-209ENST00000541967 ABCA3Q99758 1704 aa24.41■■□□□ 1.5
ARF3-209ENST00000541967 SSH2Q76I76 1423 aa24.41■■□□□ 1.5
ARF3-209ENST00000541967 BRD4O60885 1362 aaPredicted RBP24.41■■□□□ 1.5
ARF3-209ENST00000541967 PNPLA6Q8IY17 1366 aa24.41■■□□□ 1.5
ARF3-209ENST00000541967 ZNF692Q9BU19 519 aaPredicted RBP24.4■■□□□ 1.5
ARF3-209ENST00000541967 A0A1W2PP64 1363 aa24.4■■□□□ 1.5
ARF3-209ENST00000541967 MARF1Q9Y4F3 1742 aaKnown RBP24.38■■□□□ 1.49
ARF3-209ENST00000541967 KIF7Q2M1P5 1343 aa24.38■■□□□ 1.49
ARF3-209ENST00000541967 PIK3C2AO00443 1686 aa24.38■■□□□ 1.49
ARF3-209ENST00000541967 KTN1Q86UP2 1357 aaKnown RBP24.38■■□□□ 1.49
ARF3-209ENST00000541967 ANKRD36BQ8N2N9 1353 aa24.37■■□□□ 1.49
ARF3-209ENST00000541967 TERF2IPQ9NYB0 399 aa24.36■■□□□ 1.49
ARF3-209ENST00000541967 USP54Q70EL1 1684 aa24.35■■□□□ 1.49
ARF3-209ENST00000541967 HDGFL2Q7Z4V5 671 aaPredicted RBP24.35■■□□□ 1.49
ARF3-209ENST00000541967 ARHGEF10O15013 1369 aa24.34■■□□□ 1.49
ARF3-209ENST00000541967 CCDC7Q96M83 1385 aa24.34■■□□□ 1.49
ARF3-209ENST00000541967 POLR3GLQ9BT43 218 aa24.34■■□□□ 1.49
ARF3-209ENST00000541967 PHRF1Q9P1Y6 1649 aaKnown RBP24.34■■□□□ 1.49
ARF3-209ENST00000541967 KIF20BQ96Q89 1820 aa24.33■■□□□ 1.49
ARF3-209ENST00000541967 PAK3O75914 559 aaPredicted RBP24.33■■□□□ 1.49
ARF3-209ENST00000541967 EDC4Q6P2E9 1401 aaKnown RBP24.33■■□□□ 1.49
ARF3-209ENST00000541967 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.48
ARF3-209ENST00000541967 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
ARF3-209ENST00000541967 SPATA31A6Q5VVP1 1343 aa24.32■■□□□ 1.48
ARF3-209ENST00000541967 TTC21BQ7Z4L5 1316 aa24.32■■□□□ 1.48
ARF3-209ENST00000541967 LRP6O75581 1613 aa24.3■■□□□ 1.48
ARF3-209ENST00000541967 TTC21AQ8NDW8 1320 aa24.29■■□□□ 1.48
ARF3-209ENST00000541967 LMOD2Q6P5Q4 547 aa24.28■■□□□ 1.48
ARF3-209ENST00000541967 ABTB2Q8N961 1025 aa24.26■■□□□ 1.47
ARF3-209ENST00000541967 CARD14Q9BXL6 1004 aa24.25■■□□□ 1.47
ARF3-209ENST00000541967 ANKRD26Q9UPS8 1709 aa24.24■■□□□ 1.47
ARF3-209ENST00000541967 SLIT3O75094 1523 aa24.24■■□□□ 1.47
ARF3-209ENST00000541967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.23■■□□□ 1.47
ARF3-209ENST00000541967 USP31Q70CQ4 1352 aa24.23■■□□□ 1.47
ARF3-209ENST00000541967 NSD3Q9BZ95 1437 aa24.23■■□□□ 1.47
ARF3-209ENST00000541967 USP19O94966 1318 aa24.22■■□□□ 1.47
ARF3-209ENST00000541967 NUTM2GQ5VZR2 741 aa24.22■■□□□ 1.47
ARF3-209ENST00000541967 CABLES1Q8TDN4 633 aa24.22■■□□□ 1.47
ARF3-209ENST00000541967 PANK3Q9H999 370 aa24.22■■□□□ 1.47
ARF3-209ENST00000541967 RGS17Q9UGC6 210 aaPredicted RBP24.22■■□□□ 1.47
ARF3-209ENST00000541967 NUTM2BA6NNL0 878 aaPredicted RBP24.21■■□□□ 1.47
ARF3-209ENST00000541967 NUTM2EB1AL46 878 aaPredicted RBP24.21■■□□□ 1.47
ARF3-209ENST00000541967 NLRP13Q86W25 1043 aa24.21■■□□□ 1.47
ARF3-209ENST00000541967 NME9Q86XW9 330 aa24.21■■□□□ 1.47
ARF3-209ENST00000541967 NUTM2AQ8IVF1 878 aaPredicted RBP24.21■■□□□ 1.47
ARF3-209ENST00000541967 OVOS2A0A0J9YW53 1432 aa24.19■■□□□ 1.46
ARF3-209ENST00000541967 OVOS2Q6IE36 1432 aa24.19■■□□□ 1.46
ARF3-209ENST00000541967 NLRP6P59044 892 aa24.19■■□□□ 1.46
ARF3-209ENST00000541967 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
ARF3-209ENST00000541967 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
ARF3-209ENST00000541967 PLCH1Q4KWH8 1693 aa24.17■■□□□ 1.46
ARF3-209ENST00000541967 LTN1O94822 1766 aa24.16■■□□□ 1.46
ARF3-209ENST00000541967 FYB1O15117 783 aa24.15■■□□□ 1.46
ARF3-209ENST00000541967 NFAT5O94916 1531 aa24.15■■□□□ 1.46
ARF3-209ENST00000541967 COL14A1Q05707 1796 aaKnown RBP24.14■■□□□ 1.46
ARF3-209ENST00000541967 ADAMTS2O95450 1211 aa24.14■■□□□ 1.45
ARF3-209ENST00000541967 NWD2Q9ULI1 1742 aa24.14■■□□□ 1.45
ARF3-209ENST00000541967 COL18A1P39060 1754 aa24.12■■□□□ 1.45
ARF3-209ENST00000541967 HAP1P54257 671 aaPredicted RBP24.12■■□□□ 1.45
ARF3-209ENST00000541967 CGNL1Q0VF96 1302 aa24.11■■□□□ 1.45
ARF3-209ENST00000541967 RGPD5Q99666 1765 aa24.11■■□□□ 1.45
ARF3-209ENST00000541967 PER1O15534 1290 aaPredicted RBP24.11■■□□□ 1.45
ARF3-209ENST00000541967 GCP02774 474 aa24.11■■□□□ 1.45
ARF3-209ENST00000541967 MEX3CQ5U5Q3 659 aaKnown RBP24.11■■□□□ 1.45
ARF3-209ENST00000541967 GGNBP2Q9H3C7 697 aa24.11■■□□□ 1.45
ARF3-209ENST00000541967 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.1■■□□□ 1.45
ARF3-209ENST00000541967 LMO7Q8WWI1 1683 aa24.1■■□□□ 1.45
ARF3-209ENST00000541967 MAP2P11137 1827 aaKnown RBP24.1■■□□□ 1.45
ARF3-209ENST00000541967 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
ARF3-209ENST00000541967 CPDO75976 1380 aa24.09■■□□□ 1.45
ARF3-209ENST00000541967 COG3Q96JB2 828 aa24.09■■□□□ 1.45
ARF3-209ENST00000541967 KCNH5Q8NCM2 988 aa24.08■■□□□ 1.45
ARF3-209ENST00000541967 NSD2O96028 1365 aa24.07■■□□□ 1.44
ARF3-209ENST00000541967 KIAA0232Q92628 1395 aa24.07■■□□□ 1.44
ARF3-209ENST00000541967 SLIT2O94813 1529 aa24.07■■□□□ 1.44
ARF3-209ENST00000541967 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
ARF3-209ENST00000541967 KNSTRNQ9Y448 316 aa24.07■■□□□ 1.44
ARF3-209ENST00000541967 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
ARF3-209ENST00000541967 C8orf37Q96NL8 207 aa24.06■■□□□ 1.44
ARF3-209ENST00000541967 AMER1Q5JTC6 1135 aaPredicted RBP24.05■■□□□ 1.44
ARF3-209ENST00000541967 FAM83GA6ND36 823 aa24.04■■□□□ 1.44
ARF3-209ENST00000541967 FNBP4Q8N3X1 1017 aaPredicted RBP24.03■■□□□ 1.44
ARF3-209ENST00000541967 NGLY1Q96IV0 654 aa24.03■■□□□ 1.44
ARF3-209ENST00000541967 ABCC6O95255 1503 aa24.03■■□□□ 1.44
ARF3-209ENST00000541967 AFF2P51816 1311 aa24.03■■□□□ 1.44
ARF3-209ENST00000541967 SOX12O15370 315 aa24.02■■□□□ 1.44
ARF3-209ENST00000541967 ARHGEF25Q86VW2 580 aa24.02■■□□□ 1.44
ARF3-209ENST00000541967 PRDM11Q9NQV5 511 aa24.02■■□□□ 1.44
ARF3-209ENST00000541967 NPC1L1Q9UHC9 1359 aa24.02■■□□□ 1.44
ARF3-209ENST00000541967 CAMTA1Q9Y6Y1 1673 aa24.01■■□□□ 1.43
ARF3-209ENST00000541967 BCL9LQ86UU0 1499 aa24■■□□□ 1.43
ARF3-209ENST00000541967 CHRNA2Q15822 529 aa24■■□□□ 1.43
ARF3-209ENST00000541967 PEAK1Q9H792 1746 aa24■■□□□ 1.43
ARF3-209ENST00000541967 DDX10Q13206 875 aaKnown RBP23.99■■□□□ 1.43
ARF3-209ENST00000541967 SRCAPQ6ZRS2 3230 aa23.99■■□□□ 1.43
ARF3-209ENST00000541967 AATKQ6ZMQ8 1374 aa23.99■■□□□ 1.43
ARF3-209ENST00000541967 FBLN1P23142 703 aa23.98■■□□□ 1.43
ARF3-209ENST00000541967 POTEAQ6S8J7 498 aa23.98■■□□□ 1.43
ARF3-209ENST00000541967 BTG4Q9NY30 223 aa23.96■■□□□ 1.43
ARF3-209ENST00000541967 USP21Q9UK80 565 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms