RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 SPIRE2Q8WWL2 714 aa6.63□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 BAP1Q92560 729 aa6.63□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 ZFP42Q96MM3 310 aa6.63□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 LINC01559Q495D7 138 aa6.62□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 ZNF511Q8NB15 262 aa6.62□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 TLL2Q9Y6L7 1015 aa6.62□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 VEGFBP49765 207 aa6.61□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 NNTQ13423 1086 aa6.61□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 MTMR2Q13614 643 aa6.61□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 SCARF1Q14162 830 aa6.61□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 MRPL14Q6P1L8 145 aaKnown RBP6.61□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 PRR7Q8TB68 274 aa6.61□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 MOXD2PA6NHM9 499 aa6.6□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 NDUFV2P19404 249 aa6.6□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 ERBB4Q15303 1308 aa6.59□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 ADH1CP00326 375 aa6.59□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 TIMP2P16035 220 aa6.58□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 GJA5P36382 358 aa6.58□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 WDR4P57081 412 aaKnown RBP6.58□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 FAM174AQ8TBP5 190 aa6.58□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 TTLL12Q14166 644 aaPredicted RBP6.57□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 DIXDC1Q155Q3 683 aa6.57□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.57□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 NPM2Q86SE8 214 aaKnown RBP6.57□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 VSIG10Q8N0Z9 540 aa6.57□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 PURBQ96QR8 312 aaKnown RBP6.57□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 VSIG8P0DPA2 414 aa6.56□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 CTHP32929 405 aa6.56□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 AMHR2Q16671 573 aa6.56□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 LYPD8Q6UX82 237 aa6.56□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 CDK15Q96Q40 435 aa6.56□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 KLF16Q9BXK1 252 aaPredicted RBP6.56□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 GIGYF2Q6Y7W6 1299 aaKnown RBP6.54□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 BARGINQ6ZT62 677 aa6.54□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 BEGAINQ9BUH8 593 aa6.54□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 NR5A1Q13285 461 aa6.53□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 RSBN1LQ6PCB5 846 aaPredicted RBP6.53□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 TBC1D2Q9BYX2 928 aa6.53□□□□□ -1.36
CACNA1C-IT2-201ENST00000541871 SOBPA7XYQ1 873 aa6.52□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 MAN1A2O60476 641 aa6.52□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 ZIC2O95409 532 aaPredicted RBP6.52□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 F12P00748 615 aaPredicted RBP6.52□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 ARID5BQ14865 1188 aa6.52□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 FOXJ1Q92949 421 aa6.52□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 ZBTB3Q9H5J0 574 aa6.52□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 CFAP99D6REC4 459 aa6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 SPTLC1O15269 473 aa6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 ZMYND10O75800 440 aa6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 PRPF38BQ5VTL8 546 aaKnown RBP6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 BPHLQ86WA6 291 aaPredicted RBP6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 ITPKCQ96DU7 683 aa6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 ZFAND3Q9H8U3 227 aa6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 PCDHB15Q9Y5E8 787 aa6.51□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 UPP2O95045 317 aa6.5□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 HRCP23327 699 aa6.5□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 AGERQ15109 404 aa6.5□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 MAP10Q9P2G4 905 aa6.5□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 NR3C2P08235 984 aa6.49□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 GRM5P41594 1212 aa6.49□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 C6orf118Q5T5N4 469 aa6.49□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 PPFIA3O75145 1194 aa6.48□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 BMP2P12643 396 aa6.48□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 TMEM132AQ24JP5 1023 aa6.48□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 LINC00528Q8N1L1 170 aa6.48□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 MEIOBQ8N635 442 aa6.48□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 ARMC2Q8NEN0 867 aa6.48□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 KCNMA1Q12791 1236 aa6.47□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 RIC3Q7Z5B4 369 aa6.47□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 KRTAP4-6Q9BYQ5 205 aa6.47□□□□□ -1.37
CACNA1C-IT2-201ENST00000541871 C14orf37Q86TY3 774 aa6.46□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 PARP9Q8IXQ6 854 aa6.46□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 ZC3H15Q8WU90 426 aaKnown RBP6.46□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 MAP4K5Q9Y4K4 846 aa6.46□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 SOS2Q07890 1332 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 NBPF14Q5TI25 921 aa6.45□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 SH3RF1Q7Z6J0 888 aa6.45□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 CABLES1Q8TDN4 633 aa6.45□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 TSEN34Q9BSV6 310 aaKnown RBP6.45□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 C1QTNF2Q9BXJ5 285 aa6.45□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 PER1O15534 1290 aaPredicted RBP6.44□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 FSHRP23945 695 aa6.44□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 TUSC1Q2TAM9 212 aa6.44□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 TRMT44Q8IYL2 757 aaKnown RBP6.44□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 DNMT3LQ9UJW3 386 aa6.44□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 EMILIN1Q9Y6C2 1016 aa6.44□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 CSPP1Q1MSJ5 1256 aa6.43□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.43□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 VASH1Q7L8A9 365 aaPredicted RBP6.43□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 NUTM2BA6NNL0 878 aaPredicted RBP6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 NUTM2EB1AL46 878 aaPredicted RBP6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 TRIM66O15016 1216 aa6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 NUTM2DQ5VT03 806 aaPredicted RBP6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 SH3BP5LQ7L8J4 393 aa6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 NUTM2AQ8IVF1 878 aaPredicted RBP6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 CCDC116Q8IYX3 515 aa6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 TSC1Q92574 1164 aa6.42□□□□□ -1.38
CACNA1C-IT2-201ENST00000541871 TTLL8A6PVC2 850 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms