RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
LMO3-228ENST00000541846 PARD3Q8TEW0 1356 aa17.04■□□□□ 0.32
LMO3-228ENST00000541846 SOS2Q07890 1332 aaPredicted RBP17.04■□□□□ 0.32
LMO3-228ENST00000541846 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
LMO3-228ENST00000541846 PSME1Q06323 249 aa17.04■□□□□ 0.32
LMO3-228ENST00000541846 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
LMO3-228ENST00000541846 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
LMO3-228ENST00000541846 NSD2O96028 1365 aa17.02■□□□□ 0.32
LMO3-228ENST00000541846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
LMO3-228ENST00000541846 DDX17Q92841 729 aaKnown RBP17.02■□□□□ 0.32
LMO3-228ENST00000541846 TRPM3Q9HCF6 1732 aaPredicted RBP17.01■□□□□ 0.31
LMO3-228ENST00000541846 RALBP1Q15311 655 aa17.01■□□□□ 0.31
LMO3-228ENST00000541846 SBNO1A3KN83 1393 aa17.01■□□□□ 0.31
LMO3-228ENST00000541846 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
LMO3-228ENST00000541846 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
LMO3-228ENST00000541846 PXDNQ92626 1479 aa17■□□□□ 0.31
LMO3-228ENST00000541846 FYB1O15117 783 aa17■□□□□ 0.31
LMO3-228ENST00000541846 GGNBP2Q9H3C7 697 aa16.99■□□□□ 0.31
LMO3-228ENST00000541846 AHDC1Q5TGY3 1603 aaPredicted RBP16.99■□□□□ 0.31
LMO3-228ENST00000541846 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
LMO3-228ENST00000541846 USP54Q70EL1 1684 aa16.98■□□□□ 0.31
LMO3-228ENST00000541846 ROBO1Q9Y6N7 1651 aa16.98■□□□□ 0.31
LMO3-228ENST00000541846 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
LMO3-228ENST00000541846 NME9Q86XW9 330 aa16.98■□□□□ 0.31
LMO3-228ENST00000541846 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
LMO3-228ENST00000541846 MARF1Q9Y4F3 1742 aaKnown RBP16.98■□□□□ 0.31
LMO3-228ENST00000541846 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.31
LMO3-228ENST00000541846 MYBBP1AQ9BQG0 1328 aaKnown RBP16.96■□□□□ 0.31
LMO3-228ENST00000541846 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
LMO3-228ENST00000541846 ALS2Q96Q42 1657 aa16.96■□□□□ 0.31
LMO3-228ENST00000541846 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
LMO3-228ENST00000541846 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
LMO3-228ENST00000541846 FBXO41Q8TF61 875 aa16.95■□□□□ 0.3
LMO3-228ENST00000541846 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
LMO3-228ENST00000541846 ZRANB1Q9UGI0 708 aa16.95■□□□□ 0.3
LMO3-228ENST00000541846 OVOS2A0A0J9YW53 1432 aa16.95■□□□□ 0.3
LMO3-228ENST00000541846 OVOS2Q6IE36 1432 aa16.95■□□□□ 0.3
LMO3-228ENST00000541846 USP31Q70CQ4 1352 aa16.94■□□□□ 0.3
LMO3-228ENST00000541846 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
LMO3-228ENST00000541846 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
LMO3-228ENST00000541846 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
LMO3-228ENST00000541846 ABTB2Q8N961 1025 aa16.92■□□□□ 0.3
LMO3-228ENST00000541846 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
LMO3-228ENST00000541846 ARHGEF10O15013 1369 aa16.91■□□□□ 0.3
LMO3-228ENST00000541846 HSPA1LP34931 641 aa16.91■□□□□ 0.3
LMO3-228ENST00000541846 TNNT2P45379 298 aaPredicted RBP16.91■□□□□ 0.3
LMO3-228ENST00000541846 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
LMO3-228ENST00000541846 COG3Q96JB2 828 aa16.91■□□□□ 0.3
LMO3-228ENST00000541846 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
LMO3-228ENST00000541846 USP19O94966 1318 aa16.89■□□□□ 0.29
LMO3-228ENST00000541846 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
LMO3-228ENST00000541846 NLRP6P59044 892 aa16.88■□□□□ 0.29
LMO3-228ENST00000541846 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
LMO3-228ENST00000541846 CRYBG1Q9Y4K1 1723 aa16.87■□□□□ 0.29
LMO3-228ENST00000541846 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
LMO3-228ENST00000541846 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
LMO3-228ENST00000541846 PHLPP1O60346 1717 aa16.86■□□□□ 0.29
LMO3-228ENST00000541846 AATKQ6ZMQ8 1374 aa16.86■□□□□ 0.29
LMO3-228ENST00000541846 SLIT3O75094 1523 aa16.86■□□□□ 0.29
LMO3-228ENST00000541846 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
LMO3-228ENST00000541846 FBLN1P23142 703 aa16.85■□□□□ 0.29
LMO3-228ENST00000541846 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
LMO3-228ENST00000541846 JCADQ9P266 1359 aa16.85■□□□□ 0.29
LMO3-228ENST00000541846 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
LMO3-228ENST00000541846 LTN1O94822 1766 aa16.84■□□□□ 0.29
LMO3-228ENST00000541846 NFAT5O94916 1531 aa16.83■□□□□ 0.28
LMO3-228ENST00000541846 GCP02774 474 aa16.83■□□□□ 0.28
LMO3-228ENST00000541846 MTHFSP49914 203 aa16.83■□□□□ 0.28
LMO3-228ENST00000541846 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.28
LMO3-228ENST00000541846 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
LMO3-228ENST00000541846 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
LMO3-228ENST00000541846 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
LMO3-228ENST00000541846 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
LMO3-228ENST00000541846 SHPRHQ149N8 1683 aa16.81■□□□□ 0.28
LMO3-228ENST00000541846 SOX12O15370 315 aa16.81■□□□□ 0.28
LMO3-228ENST00000541846 CABLES1Q8TDN4 633 aa16.81■□□□□ 0.28
LMO3-228ENST00000541846 RRS1Q15050 365 aaKnown RBP16.8■□□□□ 0.28
LMO3-228ENST00000541846 EMILIN1Q9Y6C2 1016 aa16.8■□□□□ 0.28
LMO3-228ENST00000541846 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
LMO3-228ENST00000541846 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
LMO3-228ENST00000541846 SPATA31A6Q5VVP1 1343 aa16.79■□□□□ 0.28
LMO3-228ENST00000541846 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
LMO3-228ENST00000541846 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
LMO3-228ENST00000541846 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
LMO3-228ENST00000541846 PNISRQ8TF01 805 aaKnown RBP16.78■□□□□ 0.28
LMO3-228ENST00000541846 CPDO75976 1380 aa16.77■□□□□ 0.28
LMO3-228ENST00000541846 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
LMO3-228ENST00000541846 CFAP53Q96M91 514 aa16.77■□□□□ 0.28
LMO3-228ENST00000541846 INSRP06213 1382 aa16.77■□□□□ 0.27
LMO3-228ENST00000541846 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
LMO3-228ENST00000541846 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
LMO3-228ENST00000541846 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
LMO3-228ENST00000541846 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
LMO3-228ENST00000541846 ZC3H6P61129 1189 aaKnown RBP16.73■□□□□ 0.27
LMO3-228ENST00000541846 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
LMO3-228ENST00000541846 FLT4P35916 1363 aa16.73■□□□□ 0.27
LMO3-228ENST00000541846 COL18A1P39060 1754 aa16.72■□□□□ 0.27
LMO3-228ENST00000541846 FAM83GA6ND36 823 aa16.72■□□□□ 0.27
LMO3-228ENST00000541846 AMPHP49418 695 aa16.72■□□□□ 0.27
LMO3-228ENST00000541846 KIAA0232Q92628 1395 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms