RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 ABCC11Q96J66 1382 aa11.13□□□□□ -0.63
CLDN2-203ENST00000541806 SOX12O15370 315 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 RARSP54136 660 aaKnown RBP11.12□□□□□ -0.63
CLDN2-203ENST00000541806 NME9Q86XW9 330 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 ALKQ9UM73 1620 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 IGHDP01880 384 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 CLTCQ00610 1675 aaKnown RBP11.12□□□□□ -0.63
CLDN2-203ENST00000541806 RIPK4P57078 832 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 NSD2O96028 1365 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 METP08581 1390 aa11.12□□□□□ -0.63
CLDN2-203ENST00000541806 A2ML1A8K2U0 1454 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 KDM2BQ8NHM5 1336 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
CLDN2-203ENST00000541806 WDR63Q8IWG1 891 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 RLBP1P12271 317 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
CLDN2-203ENST00000541806 SLC26A8Q96RN1 970 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 PPP6R1Q9UPN7 881 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
CLDN2-203ENST00000541806 MS4A1P11836 297 aa11.1□□□□□ -0.63
CLDN2-203ENST00000541806 WASLO00401 505 aaPredicted RBP11.1□□□□□ -0.63
CLDN2-203ENST00000541806 RRS1Q15050 365 aaKnown RBP11.1□□□□□ -0.63
CLDN2-203ENST00000541806 PRKAR2BP31323 418 aa11.09□□□□□ -0.63
CLDN2-203ENST00000541806 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
CLDN2-203ENST00000541806 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
CLDN2-203ENST00000541806 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLDN2-203ENST00000541806 SMC4Q9NTJ3 1288 aa11.09□□□□□ -0.63
CLDN2-203ENST00000541806 NINLQ9Y2I6 1382 aa11.09□□□□□ -0.63
CLDN2-203ENST00000541806 NEFMP07197 916 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 FTSJ3Q8IY81 847 aaKnown RBP11.08□□□□□ -0.64
CLDN2-203ENST00000541806 POLKQ9UBT6 870 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 CD163L1Q9NR16 1453 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 IL27Q8NEV9 243 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
CLDN2-203ENST00000541806 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
CLDN2-203ENST00000541806 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
CLDN2-203ENST00000541806 PHF23Q9BUL5 403 aaPredicted RBP11.07□□□□□ -0.64
CLDN2-203ENST00000541806 TNRQ92752 1358 aa11.07□□□□□ -0.64
CLDN2-203ENST00000541806 ARHGEF40Q8TER5 1519 aa11.07□□□□□ -0.64
CLDN2-203ENST00000541806 A0A0U1RQG5 324 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-203ENST00000541806 ZMYND15Q9H091 742 aa11.06□□□□□ -0.64
CLDN2-203ENST00000541806 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-203ENST00000541806 CCDC27Q2M243 656 aa11.06□□□□□ -0.64
CLDN2-203ENST00000541806 PPIP5K1Q6PFW1 1433 aa11.06□□□□□ -0.64
CLDN2-203ENST00000541806 IQSEC2Q5JU85 1478 aa11.06□□□□□ -0.64
CLDN2-203ENST00000541806 LTKP29376 864 aa11.06□□□□□ -0.64
CLDN2-203ENST00000541806 COG3Q96JB2 828 aa11.06□□□□□ -0.64
CLDN2-203ENST00000541806 PHACTR3Q96KR7 559 aa11.06□□□□□ -0.64
CLDN2-203ENST00000541806 PCDHB15Q9Y5E8 787 aa11.05□□□□□ -0.64
CLDN2-203ENST00000541806 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
CLDN2-203ENST00000541806 AGLP35573 1532 aa11.05□□□□□ -0.64
CLDN2-203ENST00000541806 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
CLDN2-203ENST00000541806 ITPRIPQ8IWB1 547 aa11.04□□□□□ -0.64
CLDN2-203ENST00000541806 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
CLDN2-203ENST00000541806 FAM161AQ3B820 660 aa11.04□□□□□ -0.64
CLDN2-203ENST00000541806 PMFBP1Q8TBY8 1022 aa11.04□□□□□ -0.64
CLDN2-203ENST00000541806 FGD1P98174 961 aa11.03□□□□□ -0.64
CLDN2-203ENST00000541806 DZIP1LQ8IYY4 767 aaKnown RBP11.03□□□□□ -0.64
CLDN2-203ENST00000541806 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
CLDN2-203ENST00000541806 NOB1Q9ULX3 412 aaKnown RBP11.03□□□□□ -0.64
CLDN2-203ENST00000541806 SPATA31D1Q6ZQQ2 1576 aa11.03□□□□□ -0.64
CLDN2-203ENST00000541806 USP32Q8NFA0 1604 aa11.02□□□□□ -0.64
CLDN2-203ENST00000541806 PRR36Q9H6K5 1346 aa11.02□□□□□ -0.64
CLDN2-203ENST00000541806 C8orf34Q49A92 452 aa11.02□□□□□ -0.64
CLDN2-203ENST00000541806 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.64
CLDN2-203ENST00000541806 NLRP1Q9C000 1473 aa11.02□□□□□ -0.65
CLDN2-203ENST00000541806 FCHSD2O94868 740 aa11.02□□□□□ -0.65
CLDN2-203ENST00000541806 DCTN1Q14203 1278 aa11.02□□□□□ -0.65
CLDN2-203ENST00000541806 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.65
CLDN2-203ENST00000541806 ROBO2Q9HCK4 1378 aa11.01□□□□□ -0.65
CLDN2-203ENST00000541806 FAM83GA6ND36 823 aa11.01□□□□□ -0.65
CLDN2-203ENST00000541806 TRIM27P14373 513 aa11.01□□□□□ -0.65
CLDN2-203ENST00000541806 EID1Q9Y6B2 187 aa11.01□□□□□ -0.65
CLDN2-203ENST00000541806 TMEM2Q9UHN6 1383 aa11.01□□□□□ -0.65
CLDN2-203ENST00000541806 MVPQ14764 893 aaKnown RBP11.01□□□□□ -0.65
CLDN2-203ENST00000541806 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
CLDN2-203ENST00000541806 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
CLDN2-203ENST00000541806 PDZRN3Q9UPQ7 1066 aa11□□□□□ -0.65
CLDN2-203ENST00000541806 ACEP12821 1306 aa10.99□□□□□ -0.65
CLDN2-203ENST00000541806 IL13P35225 146 aa10.99□□□□□ -0.65
CLDN2-203ENST00000541806 AEBP1Q8IUX7 1158 aa10.99□□□□□ -0.65
CLDN2-203ENST00000541806 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
CLDN2-203ENST00000541806 AMOTL2Q9Y2J4 779 aa10.99□□□□□ -0.65
CLDN2-203ENST00000541806 NFE2L2Q16236 605 aa10.99□□□□□ -0.65
CLDN2-203ENST00000541806 NUTM2GQ5VZR2 741 aa10.99□□□□□ -0.65
CLDN2-203ENST00000541806 TMEM57Q8N5G2 664 aa10.99□□□□□ -0.65
CLDN2-203ENST00000541806 RWDD1Q9H446 243 aaPredicted RBP10.99□□□□□ -0.65
CLDN2-203ENST00000541806 ATF7IPQ6VMQ6 1270 aa10.98□□□□□ -0.65
CLDN2-203ENST00000541806 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
CLDN2-203ENST00000541806 REREQ9P2R6 1566 aa10.98□□□□□ -0.65
CLDN2-203ENST00000541806 SULT6B1Q6IMI4 303 aa10.98□□□□□ -0.65
CLDN2-203ENST00000541806 PNPLA6Q8IY17 1366 aa10.98□□□□□ -0.65
CLDN2-203ENST00000541806 EDC4Q6P2E9 1401 aaKnown RBP10.98□□□□□ -0.65
CLDN2-203ENST00000541806 SEC24BO95487 1268 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms