RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 FBXO31Q5XUX0 539 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-217ENST00000541578 MAP10Q9P2G4 905 aa8.63□□□□□ -1.03
SNHG1-217ENST00000541578 BAP1Q92560 729 aa8.62□□□□□ -1.03
SNHG1-217ENST00000541578 MRGPRX2Q96LB1 330 aa8.62□□□□□ -1.03
SNHG1-217ENST00000541578 TTC24A2A3L6 582 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-217ENST00000541578 AP1G2O75843 785 aa8.61□□□□□ -1.03
SNHG1-217ENST00000541578 DGAT1O75907 488 aa8.61□□□□□ -1.03
SNHG1-217ENST00000541578 SH3BP2P78314 561 aa8.61□□□□□ -1.03
SNHG1-217ENST00000541578 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
SNHG1-217ENST00000541578 PKDCCQ504Y2 493 aa8.61□□□□□ -1.03
SNHG1-217ENST00000541578 TOR4AQ9NXH8 423 aa8.61□□□□□ -1.03
SNHG1-217ENST00000541578 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
SNHG1-217ENST00000541578 TRAF7Q6Q0C0 670 aa8.6□□□□□ -1.03
SNHG1-217ENST00000541578 SNIP1Q8TAD8 396 aaKnown RBP8.6□□□□□ -1.03
SNHG1-217ENST00000541578 RFC5P40937 340 aa8.59□□□□□ -1.03
SNHG1-217ENST00000541578 ZNF511Q8NB15 262 aa8.59□□□□□ -1.03
SNHG1-217ENST00000541578 EHBP1Q8NDI1 1231 aa8.59□□□□□ -1.03
SNHG1-217ENST00000541578 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
SNHG1-217ENST00000541578 LRRN4Q8WUT4 740 aa8.58□□□□□ -1.04
SNHG1-217ENST00000541578 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
SNHG1-217ENST00000541578 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
SNHG1-217ENST00000541578 SIAH2O43255 324 aa8.54□□□□□ -1.04
SNHG1-217ENST00000541578 USP17L8P0C7I0 530 aa8.54□□□□□ -1.04
SNHG1-217ENST00000541578 SMPD1P17405 629 aa8.54□□□□□ -1.04
SNHG1-217ENST00000541578 MYT1Q01538 1121 aa8.54□□□□□ -1.04
SNHG1-217ENST00000541578 AGERQ15109 404 aa8.54□□□□□ -1.04
SNHG1-217ENST00000541578 NBPF14Q5TI25 921 aa8.54□□□□□ -1.04
SNHG1-217ENST00000541578 FOXJ1Q92949 421 aa8.54□□□□□ -1.04
SNHG1-217ENST00000541578 J3QL48 77 aa8.53□□□□□ -1.04
SNHG1-217ENST00000541578 LCE2BO14633 110 aa8.53□□□□□ -1.04
SNHG1-217ENST00000541578 ALDH1A1P00352 501 aa8.53□□□□□ -1.04
SNHG1-217ENST00000541578 NR6A1Q15406 480 aa8.53□□□□□ -1.04
SNHG1-217ENST00000541578 BPHLQ86WA6 291 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-217ENST00000541578 FAM174AQ8TBP5 190 aa8.52□□□□□ -1.05
SNHG1-217ENST00000541578 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
SNHG1-217ENST00000541578 GPKOWQ92917 476 aaPredicted RBP eCLIP8.51□□□□□ -1.052e-31■■■□□ 17.2
SNHG1-217ENST00000541578 AVPP01185 164 aa8.5□□□□□ -1.05
SNHG1-217ENST00000541578 PNMA1Q8ND90 353 aa8.5□□□□□ -1.05
SNHG1-217ENST00000541578 WASF2Q9Y6W5 498 aa8.5□□□□□ -1.05
SNHG1-217ENST00000541578 MPNDQ8N594 471 aa8.49□□□□□ -1.05
SNHG1-217ENST00000541578 BANK1Q8NDB2 785 aa8.49□□□□□ -1.05
SNHG1-217ENST00000541578 HMX1Q9NP08 348 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-217ENST00000541578 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
SNHG1-217ENST00000541578 CTC1Q2NKJ3 1217 aa8.48□□□□□ -1.05
SNHG1-217ENST00000541578 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
SNHG1-217ENST00000541578 PDXDC2PQ6P474 469 aa8.48□□□□□ -1.05
SNHG1-217ENST00000541578 SH3BP5LQ7L8J4 393 aa8.48□□□□□ -1.05
SNHG1-217ENST00000541578 EPS8L1Q8TE68 723 aa8.48□□□□□ -1.05
SNHG1-217ENST00000541578 AXIN1O15169 862 aa8.47□□□□□ -1.05
SNHG1-217ENST00000541578 ST8SIA5O15466 376 aa8.47□□□□□ -1.05
SNHG1-217ENST00000541578 CRIPAKQ8N1N5 446 aa8.47□□□□□ -1.05
SNHG1-217ENST00000541578 HPS1Q92902 700 aa8.47□□□□□ -1.05
SNHG1-217ENST00000541578 AAASQ9NRG9 546 aa8.47□□□□□ -1.05
SNHG1-217ENST00000541578 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
SNHG1-217ENST00000541578 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
SNHG1-217ENST00000541578 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-217ENST00000541578 ARID5BQ14865 1188 aa8.46□□□□□ -1.06
SNHG1-217ENST00000541578 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
SNHG1-217ENST00000541578 CDK15Q96Q40 435 aa8.46□□□□□ -1.06
SNHG1-217ENST00000541578 PTK2Q05397 1052 aa8.45□□□□□ -1.06
SNHG1-217ENST00000541578 ARHGAP9Q9BRR9 750 aa8.45□□□□□ -1.06
SNHG1-217ENST00000541578 C1QTNF2Q9BXJ5 285 aa8.45□□□□□ -1.06
SNHG1-217ENST00000541578 CARD14Q9BXL6 1004 aa8.45□□□□□ -1.06
SNHG1-217ENST00000541578 TRIM34Q9BYJ4 488 aa8.45□□□□□ -1.06
SNHG1-217ENST00000541578 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
SNHG1-217ENST00000541578 ADH1CP00326 375 aa8.43□□□□□ -1.06
SNHG1-217ENST00000541578 ZBTB33Q86T24 672 aa8.43□□□□□ -1.06
SNHG1-217ENST00000541578 TRMT44Q8IYL2 757 aaKnown RBP8.43□□□□□ -1.06
SNHG1-217ENST00000541578 ERFEQ4G0M1 354 aa8.42□□□□□ -1.06
SNHG1-217ENST00000541578 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
SNHG1-217ENST00000541578 GJD4Q96KN9 370 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-217ENST00000541578 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
SNHG1-217ENST00000541578 APBB1O00213 710 aa8.41□□□□□ -1.06
SNHG1-217ENST00000541578 GRM5P41594 1212 aa8.41□□□□□ -1.06
SNHG1-217ENST00000541578 NR5A1Q13285 461 aa8.41□□□□□ -1.06
SNHG1-217ENST00000541578 NNTQ13423 1086 aa8.41□□□□□ -1.06
SNHG1-217ENST00000541578 DACH1Q9UI36 760 aa8.41□□□□□ -1.06
SNHG1-217ENST00000541578 SOCS7O14512 581 aa8.4□□□□□ -1.06
SNHG1-217ENST00000541578 VASH1Q7L8A9 365 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-217ENST00000541578 MTMR14Q8NCE2 650 aa8.4□□□□□ -1.06
SNHG1-217ENST00000541578 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.06
SNHG1-217ENST00000541578 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-217ENST00000541578 ADAM32Q8TC27 787 aa8.39□□□□□ -1.07
SNHG1-217ENST00000541578 SLC10A4Q96EP9 437 aa8.39□□□□□ -1.07
SNHG1-217ENST00000541578 OCSTAMPQ9BR26 566 aa8.39□□□□□ -1.07
SNHG1-217ENST00000541578 CDV3Q9UKY7 258 aaKnown RBP8.38□□□□□ -1.07
SNHG1-217ENST00000541578 WDR4P57081 412 aaKnown RBP8.37□□□□□ -1.07
SNHG1-217ENST00000541578 ATP13A2Q9NQ11 1180 aa8.37□□□□□ -1.07
SNHG1-217ENST00000541578 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
SNHG1-217ENST00000541578 ZBBXA8MT70 800 aa8.36□□□□□ -1.07
SNHG1-217ENST00000541578 POTECB2RU33 542 aa8.36□□□□□ -1.07
SNHG1-217ENST00000541578 NR3C2P08235 984 aa8.36□□□□□ -1.07
SNHG1-217ENST00000541578 FSHRP23945 695 aa8.36□□□□□ -1.07
SNHG1-217ENST00000541578 PRM3Q9NNZ6 103 aa8.36□□□□□ -1.07
SNHG1-217ENST00000541578 TIMP2P16035 220 aa8.35□□□□□ -1.07
SNHG1-217ENST00000541578 DZIP3Q86Y13 1208 aaKnown RBP8.35□□□□□ -1.07
SNHG1-217ENST00000541578 KCTD15Q96SI1 283 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-217ENST00000541578 KLF16Q9BXK1 252 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-217ENST00000541578 GMPR2Q9P2T1 348 aaKnown RBP8.35□□□□□ -1.07
SNHG1-217ENST00000541578 ZIC2O95409 532 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms